RNA–Protein interactions for RNA: ENST00000221899.7

CACTIN-201, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACTIN, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-201ENST00000221899 KCTD11Q693B1 232 aa18.8■□□□□ 0.6
CACTIN-201ENST00000221899 PRRT2Q7Z6L0 340 aaPredicted RBP18.8■□□□□ 0.6
CACTIN-201ENST00000221899 PGAM4Q8N0Y7 254 aa18.8■□□□□ 0.6
CACTIN-201ENST00000221899 SIX6OS1Q8N1H7 587 aa18.8■□□□□ 0.6
CACTIN-201ENST00000221899 XPR1Q9UBH6 696 aa18.8■□□□□ 0.6
CACTIN-201ENST00000221899 RAB26Q9ULW5 256 aa18.8■□□□□ 0.6
CACTIN-201ENST00000221899 COPG1Q9Y678 874 aaKnown RBP18.8■□□□□ 0.6
CACTIN-201ENST00000221899 MRPL42Q9Y6G3 142 aaKnown RBP18.8■□□□□ 0.6
CACTIN-201ENST00000221899 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.8■□□□□ 0.6
CACTIN-201ENST00000221899 NRP1O14786 923 aa18.8■□□□□ 0.6
CACTIN-201ENST00000221899 ADRA1BP35368 520 aa18.8■□□□□ 0.6
CACTIN-201ENST00000221899 SOX4Q06945 474 aaPredicted RBP18.8■□□□□ 0.6
CACTIN-201ENST00000221899 PRKAA1Q13131 559 aa18.8■□□□□ 0.6
CACTIN-201ENST00000221899 ZC3HC1Q86WB0 502 aaKnown RBP18.8■□□□□ 0.6
CACTIN-201ENST00000221899 B3GALNT2Q8NCR0 500 aa18.8■□□□□ 0.6
CACTIN-201ENST00000221899 PDCD6IPQ8WUM4 868 aaKnown RBP18.8■□□□□ 0.6
CACTIN-201ENST00000221899 CELF6Q96J87 481 aaKnown RBP18.8■□□□□ 0.6
CACTIN-201ENST00000221899 GBA3Q9H227 469 aa18.8■□□□□ 0.6
CACTIN-201ENST00000221899 SEMA6AQ9H2E6 1030 aa18.8■□□□□ 0.6
CACTIN-201ENST00000221899 ADA2Q9NZK5 511 aa18.8■□□□□ 0.6
CACTIN-201ENST00000221899 DERAQ9Y315 318 aa18.8■□□□□ 0.6
CACTIN-201ENST00000221899 SHROOM3Q8TF72 1996 aa18.79■□□□□ 0.6
CACTIN-201ENST00000221899 DLX3O60479 287 aa18.79■□□□□ 0.6
CACTIN-201ENST00000221899 SLC35E2BP0CK96 405 aa18.79■□□□□ 0.6
CACTIN-201ENST00000221899 RANBP1P43487 201 aa18.79■□□□□ 0.6
CACTIN-201ENST00000221899 TKTL1P51854 596 aa18.79■□□□□ 0.6
CACTIN-201ENST00000221899 CSE1LP55060 971 aaKnown RBP18.79■□□□□ 0.6
CACTIN-201ENST00000221899 MAP3K7CLP57077 242 aa18.79■□□□□ 0.6
CACTIN-201ENST00000221899 MYLK3Q32MK0 819 aa18.79■□□□□ 0.6
CACTIN-201ENST00000221899 FAM219BQ5XKK7 198 aa18.79■□□□□ 0.6
CACTIN-201ENST00000221899 GK5Q6ZS86 529 aa18.79■□□□□ 0.6
CACTIN-201ENST00000221899 DENND6AQ8IWF6 608 aa18.79■□□□□ 0.6
CACTIN-201ENST00000221899 PCDH20Q8N6Y1 951 aaKnown RBP18.79■□□□□ 0.6
CACTIN-201ENST00000221899 RNF39Q9H2S5 420 aa18.79■□□□□ 0.6
CACTIN-201ENST00000221899 VAPBO95292 243 aa18.79■□□□□ 0.6
CACTIN-201ENST00000221899 JCHAINP01591 159 aa18.79■□□□□ 0.6
CACTIN-201ENST00000221899 RGS2P41220 211 aa18.79■□□□□ 0.6
CACTIN-201ENST00000221899 BAG6P46379 1132 aa18.79■□□□□ 0.6
CACTIN-201ENST00000221899 MPP1Q00013 466 aa18.79■□□□□ 0.6
CACTIN-201ENST00000221899 PPIDQ08752 370 aaKnown RBP18.79■□□□□ 0.6
CACTIN-201ENST00000221899 NSUN2Q08J23 767 aaKnown RBP eCLIP18.79■□□□□ 0.6
CACTIN-201ENST00000221899 CTBP1Q13363 440 aa18.79■□□□□ 0.6
CACTIN-201ENST00000221899 NRF1Q16656 503 aa18.79■□□□□ 0.6
CACTIN-201ENST00000221899 TAPT1Q6NXT6 567 aa18.79■□□□□ 0.6
CACTIN-201ENST00000221899 OTOP3Q7RTS5 596 aa18.79■□□□□ 0.6
CACTIN-201ENST00000221899 CENPLQ8N0S6 344 aaPredicted RBP18.79■□□□□ 0.6
CACTIN-201ENST00000221899 ZFP28Q8NHY6 868 aa18.79■□□□□ 0.6
CACTIN-201ENST00000221899 GPR22Q99680 433 aa18.79■□□□□ 0.6
CACTIN-201ENST00000221899 MED10Q9BTT4 135 aa18.79■□□□□ 0.6
CACTIN-201ENST00000221899 DUSP16Q9BY84 665 aa18.79■□□□□ 0.6
CACTIN-201ENST00000221899 ZNF385DQ9H6B1 395 aa18.79■□□□□ 0.6
CACTIN-201ENST00000221899 ZBTB26Q9HCK0 441 aa18.79■□□□□ 0.6
CACTIN-201ENST00000221899 UBQLN1Q9UMX0 589 aaKnown RBP18.79■□□□□ 0.6
CACTIN-201ENST00000221899 PPP2R3BQ9Y5P8 575 aa18.79■□□□□ 0.6
CACTIN-201ENST00000221899 SMIM28A0A1B0GU29 152 aa18.78■□□□□ 0.6
CACTIN-201ENST00000221899 RNASEH2AO75792 299 aaKnown RBP18.78■□□□□ 0.6
CACTIN-201ENST00000221899 ASLP04424 464 aa18.78■□□□□ 0.6
CACTIN-201ENST00000221899 IGFBP6P24592 240 aaPredicted RBP18.78■□□□□ 0.6
CACTIN-201ENST00000221899 GABRB3P28472 473 aa18.78■□□□□ 0.6
CACTIN-201ENST00000221899 INHBCP55103 352 aa18.78■□□□□ 0.6
CACTIN-201ENST00000221899 ZFP1Q6P2D0 407 aa18.78■□□□□ 0.6
CACTIN-201ENST00000221899 CPSF7Q8N684 471 aaKnown RBP18.78■□□□□ 0.6
CACTIN-201ENST00000221899 NT5C3BQ969T7 300 aa18.78■□□□□ 0.6
CACTIN-201ENST00000221899 NXNL1Q96CM4 212 aa18.78■□□□□ 0.6
CACTIN-201ENST00000221899 MCMBPQ9BTE3 642 aa18.78■□□□□ 0.6
CACTIN-201ENST00000221899 EFCAB1Q9HAE3 211 aa18.78■□□□□ 0.6
CACTIN-201ENST00000221899 NDUFA13Q9P0J0 144 aa18.78■□□□□ 0.6
CACTIN-201ENST00000221899 PIRO00625 290 aa18.78■□□□□ 0.6
CACTIN-201ENST00000221899 HUS1O60921 280 aa18.78■□□□□ 0.6
CACTIN-201ENST00000221899 DDHD2O94830 711 aa18.78■□□□□ 0.6
CACTIN-201ENST00000221899 CSPG5O95196 566 aa18.78■□□□□ 0.6
CACTIN-201ENST00000221899 AHSGP02765 367 aa18.78■□□□□ 0.6
CACTIN-201ENST00000221899 MAMDC4Q6UXC1 1216 aa18.78■□□□□ 0.6
CACTIN-201ENST00000221899 AMIGO2Q86SJ2 522 aa18.78■□□□□ 0.6
CACTIN-201ENST00000221899 TICAM1Q8IUC6 712 aa18.78■□□□□ 0.6
CACTIN-201ENST00000221899 SNX31Q8N9S9 440 aa18.78■□□□□ 0.6
CACTIN-201ENST00000221899 ATP6V1E2Q96A05 226 aa18.78■□□□□ 0.6
CACTIN-201ENST00000221899 DTNBP1Q96EV8 351 aa18.78■□□□□ 0.6
CACTIN-201ENST00000221899 FTHL17Q9BXU8 183 aa18.78■□□□□ 0.6
CACTIN-201ENST00000221899 IL22Q9GZX6 179 aa18.78■□□□□ 0.6
CACTIN-201ENST00000221899 EPB41L1Q9H4G0 881 aa18.78■□□□□ 0.6
CACTIN-201ENST00000221899 CACNG4Q9UBN1 327 aa18.78■□□□□ 0.6
CACTIN-201ENST00000221899 MID2Q9UJV3 735 aa18.78■□□□□ 0.6
CACTIN-201ENST00000221899 KCNU1A8MYU2 1149 aa18.77■□□□□ 0.6
CACTIN-201ENST00000221899 CABYRO75952 493 aa18.77■□□□□ 0.6
CACTIN-201ENST00000221899 TNFAIP8O95379 198 aa18.77■□□□□ 0.6
CACTIN-201ENST00000221899 FYNP06241 537 aa18.77■□□□□ 0.6
CACTIN-201ENST00000221899 HNRNPLP14866 589 aaKnown RBP eCLIP18.77■□□□□ 0.6
CACTIN-201ENST00000221899 NPR3P17342 541 aa18.77■□□□□ 0.6
CACTIN-201ENST00000221899 PTPN1P18031 435 aaKnown RBP18.77■□□□□ 0.6
CACTIN-201ENST00000221899 NELFEP18615 380 aaKnown RBP18.77■□□□□ 0.6
CACTIN-201ENST00000221899 FGFR3P22607 806 aa18.77■□□□□ 0.6
CACTIN-201ENST00000221899 PTK2BQ14289 1009 aa18.77■□□□□ 0.6
CACTIN-201ENST00000221899 SH2D4BQ5SQS7 431 aa18.77■□□□□ 0.6
CACTIN-201ENST00000221899 IL23RQ5VWK5 629 aa18.77■□□□□ 0.6
CACTIN-201ENST00000221899 LRRC8EQ6NSJ5 796 aa18.77■□□□□ 0.6
CACTIN-201ENST00000221899 CEP97Q8IW35 865 aa18.77■□□□□ 0.6
CACTIN-201ENST00000221899 ADCY4Q8NFM4 1077 aa18.77■□□□□ 0.6
CACTIN-201ENST00000221899 SPATA22Q8NHS9 363 aa18.77■□□□□ 0.6
CACTIN-201ENST00000221899 PPTC7Q8NI37 304 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms