RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 NAB1Q13506 487 aa14.86□□□□□ -0.03
CNOT3-201ENST00000221232 EPGNQ6UW88 154 aa14.86□□□□□ -0.03
CNOT3-201ENST00000221232 CEP97Q8IW35 865 aa14.86□□□□□ -0.03
CNOT3-201ENST00000221232 USP13Q92995 863 aaPredicted RBP14.86□□□□□ -0.03
CNOT3-201ENST00000221232 NTAN1Q96AB6 310 aa14.86□□□□□ -0.03
CNOT3-201ENST00000221232 SMARCD1Q96GM5 515 aa14.86□□□□□ -0.03
CNOT3-201ENST00000221232 SLC9A7Q96T83 725 aa14.86□□□□□ -0.03
CNOT3-201ENST00000221232 ILKAPQ9H0C8 392 aaPredicted RBP14.86□□□□□ -0.03
CNOT3-201ENST00000221232 TCF7L2Q9NQB0 619 aa14.86□□□□□ -0.03
CNOT3-201ENST00000221232 ADAMTS6Q9UKP5 1117 aa14.86□□□□□ -0.03
CNOT3-201ENST00000221232 SHROOM3Q8TF72 1996 aa14.86□□□□□ -0.03
CNOT3-201ENST00000221232 GLTPD2A6NH11 291 aa14.86□□□□□ -0.03
CNOT3-201ENST00000221232 MPOP05164 745 aa14.86□□□□□ -0.03
CNOT3-201ENST00000221232 CXCR3P49682 368 aa14.86□□□□□ -0.03
CNOT3-201ENST00000221232 PCBP1Q15365 356 aaKnown RBP eCLIP14.86□□□□□ -0.032e-6■■■■□ 24.2
CNOT3-201ENST00000221232 ZC3HC1Q86WB0 502 aaKnown RBP14.86□□□□□ -0.03
CNOT3-201ENST00000221232 SCN4BQ8IWT1 228 aa14.86□□□□□ -0.03
CNOT3-201ENST00000221232 FSTL5Q8N475 847 aaPredicted RBP14.86□□□□□ -0.03
CNOT3-201ENST00000221232 NDNQ99608 321 aa14.86□□□□□ -0.03
CNOT3-201ENST00000221232 SLC39A8Q9C0K1 460 aa14.86□□□□□ -0.03
CNOT3-201ENST00000221232 IL22Q9GZX6 179 aa14.86□□□□□ -0.03
CNOT3-201ENST00000221232 C1orf21Q9H246 121 aa14.86□□□□□ -0.03
CNOT3-201ENST00000221232 EBF3Q9H4W6 596 aa14.86□□□□□ -0.03
CNOT3-201ENST00000221232 CYP4F12Q9HCS2 524 aa14.86□□□□□ -0.03
CNOT3-201ENST00000221232 CHST12Q9NRB3 414 aa14.86□□□□□ -0.03
CNOT3-201ENST00000221232 SCOCQ9UIL1 159 aa14.86□□□□□ -0.03
CNOT3-201ENST00000221232 POMPQ9Y244 141 aa14.86□□□□□ -0.03
CNOT3-201ENST00000221232 CHRNA1P02708 482 aa14.85□□□□□ -0.03
CNOT3-201ENST00000221232 TCN1P20061 433 aaPredicted RBP14.85□□□□□ -0.03
CNOT3-201ENST00000221232 NPY2RP49146 381 aa14.85□□□□□ -0.03
CNOT3-201ENST00000221232 PKNOX1P55347 436 aa14.85□□□□□ -0.03
CNOT3-201ENST00000221232 PURAQ00577 322 aaKnown RBP14.85□□□□□ -0.03
CNOT3-201ENST00000221232 ITKQ08881 620 aa14.85□□□□□ -0.03
CNOT3-201ENST00000221232 LSM12Q3MHD2 195 aaKnown RBP14.85□□□□□ -0.03
CNOT3-201ENST00000221232 GDF6Q6KF10 455 aaPredicted RBP14.85□□□□□ -0.03
CNOT3-201ENST00000221232 IRGCQ6NXR0 463 aa14.85□□□□□ -0.03
CNOT3-201ENST00000221232 SNX32Q86XE0 403 aa14.85□□□□□ -0.03
CNOT3-201ENST00000221232 ZNF354CQ86Y25 554 aa14.85□□□□□ -0.03
CNOT3-201ENST00000221232 MFSD6LQ8IWD5 586 aa14.85□□□□□ -0.03
CNOT3-201ENST00000221232 SNX31Q8N9S9 440 aa14.85□□□□□ -0.03
CNOT3-201ENST00000221232 TSNARE1Q96NA8 513 aa14.85□□□□□ -0.03
CNOT3-201ENST00000221232 ECSITQ9BQ95 431 aa14.85□□□□□ -0.03
CNOT3-201ENST00000221232 SUDS3Q9H7L9 328 aaPredicted RBP14.85□□□□□ -0.03
CNOT3-201ENST00000221232 TXNDC9O14530 226 aa14.85□□□□□ -0.03
CNOT3-201ENST00000221232 NCAM2O15394 837 aa14.85□□□□□ -0.03
CNOT3-201ENST00000221232 TIMM44O43615 452 aa14.85□□□□□ -0.03
CNOT3-201ENST00000221232 SBK3P0C264 359 aa14.85□□□□□ -0.03
CNOT3-201ENST00000221232 TFEBP19484 476 aa14.85□□□□□ -0.03
CNOT3-201ENST00000221232 CD52P31358 61 aa14.85□□□□□ -0.03
CNOT3-201ENST00000221232 PLK1P53350 603 aa14.85□□□□□ -0.03
CNOT3-201ENST00000221232 MAXP61244 160 aa14.85□□□□□ -0.03
CNOT3-201ENST00000221232 MRPS6P82932 125 aaKnown RBP14.85□□□□□ -0.03
CNOT3-201ENST00000221232 DSG1Q02413 1049 aa14.85□□□□□ -0.03
CNOT3-201ENST00000221232 CDK18Q07002 472 aa14.85□□□□□ -0.03
CNOT3-201ENST00000221232 CDC16Q13042 620 aa14.85□□□□□ -0.03
CNOT3-201ENST00000221232 RAB41Q5JT25 222 aa14.85□□□□□ -0.03
CNOT3-201ENST00000221232 NAPEPLDQ6IQ20 393 aa14.85□□□□□ -0.03
CNOT3-201ENST00000221232 TFAP2DQ7Z6R9 452 aa14.85□□□□□ -0.03
CNOT3-201ENST00000221232 LDB1Q86U70 411 aaPredicted RBP14.85□□□□□ -0.03
CNOT3-201ENST00000221232 ATPAF2Q8N5M1 289 aa14.85□□□□□ -0.03
CNOT3-201ENST00000221232 OR10T2Q8NGX3 314 aa14.85□□□□□ -0.03
CNOT3-201ENST00000221232 ELMO2Q96JJ3 720 aa14.85□□□□□ -0.03
CNOT3-201ENST00000221232 RBM22Q9NW64 420 aaKnown RBP eCLIP14.85□□□□□ -0.03
CNOT3-201ENST00000221232 OXSMQ9NWU1 459 aa14.85□□□□□ -0.03
CNOT3-201ENST00000221232 TRHDEQ9UKU6 1024 aa14.85□□□□□ -0.03
CNOT3-201ENST00000221232 CDH9Q9ULB4 789 aa14.85□□□□□ -0.03
CNOT3-201ENST00000221232 ZSWIM8A7E2V4 1837 aa14.85□□□□□ -0.03
CNOT3-201ENST00000221232 SF3B1O75533 1304 aaKnown RBP eCLIP14.85□□□□□ -0.031e-6■■■■■ 228.4
CNOT3-201ENST00000221232 STX16-NPEPL1H3BU86 382 aa14.84□□□□□ -0.03
CNOT3-201ENST00000221232 LIN7AO14910 233 aaPredicted RBP14.84□□□□□ -0.03
CNOT3-201ENST00000221232 PAGE1O75459 146 aa14.84□□□□□ -0.03
CNOT3-201ENST00000221232 HNRNPLP14866 589 aaKnown RBP eCLIP14.84□□□□□ -0.03
CNOT3-201ENST00000221232 GRIK1P39086 918 aa14.84□□□□□ -0.03
CNOT3-201ENST00000221232 SCAPQ12770 1279 aa14.84□□□□□ -0.03
CNOT3-201ENST00000221232 ANO4Q32M45 955 aa14.84□□□□□ -0.03
CNOT3-201ENST00000221232 THEMIS2Q5TEJ8 643 aa14.84□□□□□ -0.03
CNOT3-201ENST00000221232 TMC7Q7Z402 723 aa14.84□□□□□ -0.03
CNOT3-201ENST00000221232 GPR152Q8TDT2 470 aa14.84□□□□□ -0.03
CNOT3-201ENST00000221232 FCRL2Q96LA5 508 aaPredicted RBP14.84□□□□□ -0.03
CNOT3-201ENST00000221232 SLC38A7Q9NVC3 462 aa14.84□□□□□ -0.03
CNOT3-201ENST00000221232 XPR1Q9UBH6 696 aa14.84□□□□□ -0.03
CNOT3-201ENST00000221232 ADAM28Q9UKQ2 775 aa14.84□□□□□ -0.03
CNOT3-201ENST00000221232 SORCS3Q9UPU3 1222 aa14.84□□□□□ -0.03
CNOT3-201ENST00000221232 TTC3P53804 2025 aa14.84□□□□□ -0.03
CNOT3-201ENST00000221232 MT-CO1P00395 513 aa14.84□□□□□ -0.03
CNOT3-201ENST00000221232 F9P00740 461 aa14.84□□□□□ -0.03
CNOT3-201ENST00000221232 SLC35E2BP0CK96 405 aa14.84□□□□□ -0.03
CNOT3-201ENST00000221232 GNAT1P11488 350 aa14.84□□□□□ -0.03
CNOT3-201ENST00000221232 ENO3P13929 434 aaPredicted RBP14.84□□□□□ -0.03
CNOT3-201ENST00000221232 RAG1P15918 1043 aa14.84□□□□□ -0.03
CNOT3-201ENST00000221232 PEX2P28328 305 aa14.84□□□□□ -0.03
CNOT3-201ENST00000221232 CDK7P50613 346 aa14.84□□□□□ -0.03
CNOT3-201ENST00000221232 SFT2D3Q587I9 215 aa14.84□□□□□ -0.03
CNOT3-201ENST00000221232 MORN1Q5T089 497 aa14.84□□□□□ -0.03
CNOT3-201ENST00000221232 C14orf80Q86SX3 495 aa14.84□□□□□ -0.03
CNOT3-201ENST00000221232 CLEC14AQ86T13 490 aa14.84□□□□□ -0.03
CNOT3-201ENST00000221232 SREK1Q8WXA9 508 aaKnown RBP14.84□□□□□ -0.03
CNOT3-201ENST00000221232 TBL1YQ9BQ87 522 aa14.84□□□□□ -0.03
CNOT3-201ENST00000221232 TRPV6Q9H1D0 765 aa14.84□□□□□ -0.03
CNOT3-201ENST00000221232 VCXQ9H320 206 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms