RNA–Protein interactions for RNA: ENST00000220888.9

TRPS1-201, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 5,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-201ENST00000220888 PHTF1Q9UMS5 762 aa10.69□□□□□ -0.7
TRPS1-201ENST00000220888 UNC13AQ9UPW8 1703 aa10.69□□□□□ -0.7
TRPS1-201ENST00000220888 MYL12BO14950 172 aa10.69□□□□□ -0.7
TRPS1-201ENST00000220888 GRM6O15303 877 aa10.69□□□□□ -0.7
TRPS1-201ENST00000220888 CCL16O15467 120 aa10.69□□□□□ -0.7
TRPS1-201ENST00000220888 RNASEH2AO75792 299 aaKnown RBP10.69□□□□□ -0.7
TRPS1-201ENST00000220888 AKAP3O75969 853 aa10.69□□□□□ -0.7
TRPS1-201ENST00000220888 EPORP19235 508 aa10.69□□□□□ -0.7
TRPS1-201ENST00000220888 CD86P42081 329 aa10.69□□□□□ -0.7
TRPS1-201ENST00000220888 CRATP43155 626 aa10.69□□□□□ -0.7
TRPS1-201ENST00000220888 GCNT1Q02742 428 aa10.69□□□□□ -0.7
TRPS1-201ENST00000220888 SMARCB1Q12824 385 aa10.69□□□□□ -0.7
TRPS1-201ENST00000220888 TSNQ15631 228 aaKnown RBP10.69□□□□□ -0.7
TRPS1-201ENST00000220888 CRTC3Q6UUV7 619 aa10.69□□□□□ -0.7
TRPS1-201ENST00000220888 GLI2P10070 1586 aa10.69□□□□□ -0.7
TRPS1-201ENST00000220888 ANXA6P08133 673 aa10.68□□□□□ -0.7
TRPS1-201ENST00000220888 MAPKAPK2P49137 400 aa10.68□□□□□ -0.7
TRPS1-201ENST00000220888 ACAP1Q15027 740 aa10.68□□□□□ -0.7
TRPS1-201ENST00000220888 VCPIP1Q96JH7 1222 aa10.68□□□□□ -0.7
TRPS1-201ENST00000220888 PORCNQ9H237 461 aa10.68□□□□□ -0.7
TRPS1-201ENST00000220888 KLC4Q9NSK0 619 aa10.68□□□□□ -0.7
TRPS1-201ENST00000220888 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.68□□□□□ -0.7
TRPS1-201ENST00000220888 VAV3Q9UKW4 847 aa10.68□□□□□ -0.7
TRPS1-201ENST00000220888 AP4S1Q9Y587 144 aa10.68□□□□□ -0.7
TRPS1-201ENST00000220888 ZNF780BQ9Y6R6 833 aa10.68□□□□□ -0.7
TRPS1-201ENST00000220888 H3BM21 787 aa10.68□□□□□ -0.7
TRPS1-201ENST00000220888 TLR5O60602 858 aa10.68□□□□□ -0.7
TRPS1-201ENST00000220888 H2AFXP16104 143 aaPredicted RBP10.68□□□□□ -0.7
TRPS1-201ENST00000220888 WASP42768 502 aa10.68□□□□□ -0.7
TRPS1-201ENST00000220888 POLD2P49005 469 aa10.68□□□□□ -0.7
TRPS1-201ENST00000220888 PRMT2P55345 433 aa10.68□□□□□ -0.7
TRPS1-201ENST00000220888 HNRNPH2P55795 449 aaKnown RBP10.68□□□□□ -0.7
TRPS1-201ENST00000220888 LPIN1Q14693 890 aa10.68□□□□□ -0.7
TRPS1-201ENST00000220888 CBX2Q14781 532 aaPredicted RBP10.68□□□□□ -0.7
TRPS1-201ENST00000220888 FAM187BQ17R55 369 aa10.68□□□□□ -0.7
TRPS1-201ENST00000220888 AFTPHQ6ULP2 937 aa10.68□□□□□ -0.7
TRPS1-201ENST00000220888 ZSWIM2Q8NEG5 633 aa10.68□□□□□ -0.7
TRPS1-201ENST00000220888 ZBTB45Q96K62 511 aaPredicted RBP10.68□□□□□ -0.7
TRPS1-201ENST00000220888 LIMD1Q9UGP4 676 aa10.68□□□□□ -0.7
TRPS1-201ENST00000220888 F8VP50 259 aa10.68□□□□□ -0.7
TRPS1-201ENST00000220888 INPP4BO15327 924 aa10.68□□□□□ -0.7
TRPS1-201ENST00000220888 ERAL1O75616 437 aaKnown RBP10.68□□□□□ -0.7
TRPS1-201ENST00000220888 TTPAP49638 278 aa10.68□□□□□ -0.7
TRPS1-201ENST00000220888 ABRQ12979 859 aa10.68□□□□□ -0.7
TRPS1-201ENST00000220888 STXBP5Q5T5C0 1151 aa10.68□□□□□ -0.7
TRPS1-201ENST00000220888 KCNT2Q6UVM3 1135 aa10.68□□□□□ -0.7
TRPS1-201ENST00000220888 RAD9BQ6WBX8 426 aa10.68□□□□□ -0.7
TRPS1-201ENST00000220888 TAF8Q7Z7C8 310 aa10.68□□□□□ -0.7
TRPS1-201ENST00000220888 OR14C36Q8NHC7 312 aa10.68□□□□□ -0.7
TRPS1-201ENST00000220888 ZNF671Q8TAW3 534 aa10.68□□□□□ -0.7
TRPS1-201ENST00000220888 SEC16BQ96JE7 1060 aa10.68□□□□□ -0.7
TRPS1-201ENST00000220888 SEPHS2Q99611 448 aa10.68□□□□□ -0.7
TRPS1-201ENST00000220888 SLC24A2Q9UI40 661 aa10.68□□□□□ -0.7
TRPS1-201ENST00000220888 SH3GLB1Q9Y371 365 aa10.68□□□□□ -0.7
TRPS1-201ENST00000220888 HES2Q9Y543 173 aa10.68□□□□□ -0.7
TRPS1-201ENST00000220888 CAMSAP1Q5T5Y3 1602 aa10.68□□□□□ -0.7
TRPS1-201ENST00000220888 A0A087X1B8 175 aa10.68□□□□□ -0.7
TRPS1-201ENST00000220888 TRIM24O15164 1050 aa10.68□□□□□ -0.7
TRPS1-201ENST00000220888 CD3EAPO15446 510 aaKnown RBP10.68□□□□□ -0.7
TRPS1-201ENST00000220888 EPHX1P07099 455 aa10.68□□□□□ -0.7
TRPS1-201ENST00000220888 GRSF1Q12849 480 aaKnown RBP eCLIP10.68□□□□□ -0.7
TRPS1-201ENST00000220888 SLC44A4Q53GD3 710 aa10.68□□□□□ -0.7
TRPS1-201ENST00000220888 SCARA3Q6AZY7 606 aa10.68□□□□□ -0.7
TRPS1-201ENST00000220888 MOB2Q70IA6 237 aa10.68□□□□□ -0.7
TRPS1-201ENST00000220888 PABPC3Q9H361 631 aaKnown RBP10.68□□□□□ -0.7
TRPS1-201ENST00000220888 ZDHHC4Q9NPG8 344 aa10.68□□□□□ -0.7
TRPS1-201ENST00000220888 PAIP2BQ9ULR5 123 aaKnown RBP10.68□□□□□ -0.7
TRPS1-201ENST00000220888 TMCO1Q9UM00 188 aa10.68□□□□□ -0.7
TRPS1-201ENST00000220888 SLC12A4Q9UP95 1085 aa10.68□□□□□ -0.7
TRPS1-201ENST00000220888 PLAGL2Q9UPG8 496 aa10.68□□□□□ -0.7
TRPS1-201ENST00000220888 A0A096LPK6 155 aa10.68□□□□□ -0.7
TRPS1-201ENST00000220888 AP3D1O14617 1153 aa10.68□□□□□ -0.7
TRPS1-201ENST00000220888 SLITRK3O94933 977 aa10.68□□□□□ -0.7
TRPS1-201ENST00000220888 ALAS2P22557 587 aa10.68□□□□□ -0.7
TRPS1-201ENST00000220888 PSMD8P48556 350 aa10.68□□□□□ -0.7
TRPS1-201ENST00000220888 XKR4Q5GH76 650 aa10.68□□□□□ -0.7
TRPS1-201ENST00000220888 TBCELQ5QJ74 424 aa10.68□□□□□ -0.7
TRPS1-201ENST00000220888 N4BP2L1Q5TBK1 243 aaPredicted RBP10.68□□□□□ -0.7
TRPS1-201ENST00000220888 TMEM164Q5U3C3 297 aa10.68□□□□□ -0.7
TRPS1-201ENST00000220888 NEPROQ6NW34 567 aa10.68□□□□□ -0.7
TRPS1-201ENST00000220888 OTOP1Q7RTM1 612 aa10.68□□□□□ -0.7
TRPS1-201ENST00000220888 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.68□□□□□ -0.7
TRPS1-201ENST00000220888 HERVK_113Q902F9 699 aa10.68□□□□□ -0.7
TRPS1-201ENST00000220888 PIH1D1Q9NWS0 290 aaKnown RBP10.68□□□□□ -0.7
TRPS1-201ENST00000220888 RABGEF1Q9UJ41 708 aa10.68□□□□□ -0.7
TRPS1-201ENST00000220888 USP20Q9Y2K6 914 aa10.68□□□□□ -0.7
TRPS1-201ENST00000220888 PCDHA11Q9Y5I1 949 aa10.68□□□□□ -0.7
TRPS1-201ENST00000220888 GLTPD2A6NH11 291 aa10.67□□□□□ -0.7
TRPS1-201ENST00000220888 CA12O43570 354 aa10.67□□□□□ -0.7
TRPS1-201ENST00000220888 CFIP05156 583 aa10.67□□□□□ -0.7
TRPS1-201ENST00000220888 TSPAN19P0C672 248 aa10.67□□□□□ -0.7
TRPS1-201ENST00000220888 NR2F1P10589 423 aa10.67□□□□□ -0.7
TRPS1-201ENST00000220888 FDPSP14324 419 aaKnown RBP10.67□□□□□ -0.7
TRPS1-201ENST00000220888 PMF1Q6P1K2 205 aa10.67□□□□□ -0.7
TRPS1-201ENST00000220888 STAG3L4Q8TBR4 150 aa10.67□□□□□ -0.7
TRPS1-201ENST00000220888 DNAJC9Q8WXX5 260 aa10.67□□□□□ -0.7
TRPS1-201ENST00000220888 FEM1CQ96JP0 617 aa10.67□□□□□ -0.7
TRPS1-201ENST00000220888 HSFY1Q96LI6 401 aa10.67□□□□□ -0.7
TRPS1-201ENST00000220888 CATSPER2Q96P56 530 aa10.67□□□□□ -0.7
TRPS1-201ENST00000220888 SH3GL2Q99962 352 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms