RNA–Protein interactions for RNA: ENST00000216294.4

SNAPC1-201, Transcript of small nuclear RNA activating complex polypeptide 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC1, Length 2,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC1-201ENST00000216294 GABRB3P28472 473 aa16.1■□□□□ 0.17
SNAPC1-201ENST00000216294 AFF1P51825 1210 aaKnown RBP16.1■□□□□ 0.17
SNAPC1-201ENST00000216294 CDK18Q07002 472 aa16.1■□□□□ 0.17
SNAPC1-201ENST00000216294 NRF1Q16656 503 aa16.1■□□□□ 0.17
SNAPC1-201ENST00000216294 FSCN1Q16658 493 aaKnown RBP16.1■□□□□ 0.17
SNAPC1-201ENST00000216294 GRIN3AQ8TCU5 1115 aa16.1■□□□□ 0.17
SNAPC1-201ENST00000216294 APBB2Q92870 758 aa16.1■□□□□ 0.17
SNAPC1-201ENST00000216294 KLHL32Q96NJ5 620 aa16.1■□□□□ 0.17
SNAPC1-201ENST00000216294 NDNQ99608 321 aa16.1■□□□□ 0.17
SNAPC1-201ENST00000216294 PCDHAC1Q9H158 963 aa16.1■□□□□ 0.17
SNAPC1-201ENST00000216294 SORCS3Q9UPU3 1222 aa16.1■□□□□ 0.17
SNAPC1-201ENST00000216294 GRID2O43424 1007 aa16.09■□□□□ 0.17
SNAPC1-201ENST00000216294 TRIM13O60858 407 aa16.09■□□□□ 0.17
SNAPC1-201ENST00000216294 DNAJA2O60884 412 aa16.09■□□□□ 0.17
SNAPC1-201ENST00000216294 CSPG5O95196 566 aa16.09■□□□□ 0.17
SNAPC1-201ENST00000216294 JCHAINP01591 159 aa16.09■□□□□ 0.17
SNAPC1-201ENST00000216294 SMIM18P0DKX4 95 aa16.09■□□□□ 0.17
SNAPC1-201ENST00000216294 MLNP12872 115 aa16.09■□□□□ 0.17
SNAPC1-201ENST00000216294 ALOX15P16050 662 aaPredicted RBP16.09■□□□□ 0.17
SNAPC1-201ENST00000216294 RPL10P27635 214 aaKnown RBP16.09■□□□□ 0.17
SNAPC1-201ENST00000216294 SPRP35270 261 aaPredicted RBP16.09■□□□□ 0.17
SNAPC1-201ENST00000216294 SERPINB8P50452 374 aa16.09■□□□□ 0.17
SNAPC1-201ENST00000216294 CBLBQ13191 982 aa16.09■□□□□ 0.17
SNAPC1-201ENST00000216294 MPP3Q13368 585 aa16.09■□□□□ 0.17
SNAPC1-201ENST00000216294 FLOT2Q14254 428 aa16.09■□□□□ 0.17
SNAPC1-201ENST00000216294 POU6F1Q14863 301 aa16.09■□□□□ 0.17
SNAPC1-201ENST00000216294 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.09■□□□□ 0.17
SNAPC1-201ENST00000216294 GRTP1Q5TC63 336 aa16.09■□□□□ 0.17
SNAPC1-201ENST00000216294 PAQR9Q6ZVX9 377 aa16.09■□□□□ 0.17
SNAPC1-201ENST00000216294 CEP97Q8IW35 865 aa16.09■□□□□ 0.17
SNAPC1-201ENST00000216294 ARRDC4Q8NCT1 418 aa16.09■□□□□ 0.17
SNAPC1-201ENST00000216294 TRPV1Q8NER1 839 aa16.09■□□□□ 0.17
SNAPC1-201ENST00000216294 RNF217Q8TC41 542 aa16.09■□□□□ 0.17
SNAPC1-201ENST00000216294 FAM110BQ8TC76 370 aa16.09■□□□□ 0.17
SNAPC1-201ENST00000216294 NAT14Q8WUY8 206 aa16.09■□□□□ 0.17
SNAPC1-201ENST00000216294 PKP2Q99959 881 aa16.09■□□□□ 0.17
SNAPC1-201ENST00000216294 CENPKQ9BS16 269 aa16.09■□□□□ 0.17
SNAPC1-201ENST00000216294 DNAJB4Q9UDY4 337 aa16.09■□□□□ 0.17
SNAPC1-201ENST00000216294 HEMK1Q9Y5R4 338 aaPredicted RBP16.09■□□□□ 0.17
SNAPC1-201ENST00000216294 MYLKQ15746 1914 aa16.09■□□□□ 0.17
SNAPC1-201ENST00000216294 SMIM28A0A1B0GU29 152 aa16.09■□□□□ 0.17
SNAPC1-201ENST00000216294 AURKAO14965 403 aa16.09■□□□□ 0.17
SNAPC1-201ENST00000216294 USP17L7P0C7H9 530 aa16.09■□□□□ 0.17
SNAPC1-201ENST00000216294 TSPAN8P19075 237 aa16.09■□□□□ 0.17
SNAPC1-201ENST00000216294 GLDCP23378 1020 aa16.09■□□□□ 0.17
SNAPC1-201ENST00000216294 GARSP41250 739 aaKnown RBP16.09■□□□□ 0.17
SNAPC1-201ENST00000216294 NOMO2Q5JPE7 1267 aa16.09■□□□□ 0.17
SNAPC1-201ENST00000216294 RBM44Q6ZP01 1051 aaKnown RBP16.09■□□□□ 0.17
SNAPC1-201ENST00000216294 SPATA24Q86W54 205 aa16.09■□□□□ 0.17
SNAPC1-201ENST00000216294 NT5DC4Q86YG4 428 aa16.09■□□□□ 0.17
SNAPC1-201ENST00000216294 RNF135Q8IUD6 432 aa16.09■□□□□ 0.17
SNAPC1-201ENST00000216294 MFSD6LQ8IWD5 586 aa16.09■□□□□ 0.17
SNAPC1-201ENST00000216294 PQLC1Q8N2U9 271 aa16.09■□□□□ 0.17
SNAPC1-201ENST00000216294 TMEM151AQ8N4L1 468 aa16.09■□□□□ 0.17
SNAPC1-201ENST00000216294 ZFP42Q96MM3 310 aa16.09■□□□□ 0.17
SNAPC1-201ENST00000216294 MED10Q9BTT4 135 aa16.09■□□□□ 0.17
SNAPC1-201ENST00000216294 ARHGAP39Q9C0H5 1083 aa16.09■□□□□ 0.17
SNAPC1-201ENST00000216294 ZFYVE28Q9HCC9 887 aa16.09■□□□□ 0.17
SNAPC1-201ENST00000216294 SLC2A6Q9UGQ3 507 aa16.09■□□□□ 0.17
SNAPC1-201ENST00000216294 HTTP42858 3142 aa16.08■□□□□ 0.17
SNAPC1-201ENST00000216294 C17orf102A2RUQ5 167 aa16.08■□□□□ 0.16
SNAPC1-201ENST00000216294 C9IYK1 514 aa16.08■□□□□ 0.16
SNAPC1-201ENST00000216294 TFEBP19484 476 aa16.08■□□□□ 0.16
SNAPC1-201ENST00000216294 GLUD2P49448 558 aa16.08■□□□□ 0.16
SNAPC1-201ENST00000216294 CHN2P52757 468 aa16.08■□□□□ 0.16
SNAPC1-201ENST00000216294 GJA9P57773 515 aa16.08■□□□□ 0.16
SNAPC1-201ENST00000216294 ZBTB6Q15916 424 aa16.08■□□□□ 0.16
SNAPC1-201ENST00000216294 STXBP5Q5T5C0 1151 aa16.08■□□□□ 0.16
SNAPC1-201ENST00000216294 GK5Q6ZS86 529 aa16.08■□□□□ 0.16
SNAPC1-201ENST00000216294 PSTKQ8IV42 348 aaKnown RBP16.08■□□□□ 0.16
SNAPC1-201ENST00000216294 ZFAND2BQ8WV99 257 aa16.08■□□□□ 0.16
SNAPC1-201ENST00000216294 SOCS4Q8WXH5 440 aa16.08■□□□□ 0.16
SNAPC1-201ENST00000216294 ZNF419Q96HQ0 510 aaPredicted RBP16.08■□□□□ 0.16
SNAPC1-201ENST00000216294 MPP4Q96JB8 637 aa16.08■□□□□ 0.16
SNAPC1-201ENST00000216294 LRRC40Q9H9A6 602 aa16.08■□□□□ 0.16
SNAPC1-201ENST00000216294 PLEKHA5Q9HAU0 1116 aa16.08■□□□□ 0.16
SNAPC1-201ENST00000216294 CYP4F12Q9HCS2 524 aa16.08■□□□□ 0.16
SNAPC1-201ENST00000216294 TNFRSF12AQ9NP84 129 aa16.08■□□□□ 0.16
SNAPC1-201ENST00000216294 CDY2AQ9Y6F7 541 aa16.08■□□□□ 0.16
SNAPC1-201ENST00000216294 CDY1Q9Y6F8 540 aa16.08■□□□□ 0.16
SNAPC1-201ENST00000216294 DCLK1O15075 740 aa16.08■□□□□ 0.16
SNAPC1-201ENST00000216294 CRTAMO95727 393 aa16.08■□□□□ 0.16
SNAPC1-201ENST00000216294 STAU1O95793 577 aaKnown RBP16.08■□□□□ 0.16
SNAPC1-201ENST00000216294 SRGAP2BP0DMP2 458 aa16.08■□□□□ 0.16
SNAPC1-201ENST00000216294 PTPN1P18031 435 aaKnown RBP16.08■□□□□ 0.16
SNAPC1-201ENST00000216294 RPS6KA3P51812 740 aa16.08■□□□□ 0.16
SNAPC1-201ENST00000216294 TKTL1P51854 596 aa16.08■□□□□ 0.16
SNAPC1-201ENST00000216294 PLK1P53350 603 aa16.08■□□□□ 0.16
SNAPC1-201ENST00000216294 PURAQ00577 322 aaKnown RBP16.08■□□□□ 0.16
SNAPC1-201ENST00000216294 CDC42EP1Q00587 391 aa16.08■□□□□ 0.16
SNAPC1-201ENST00000216294 LAMB3Q13751 1172 aa16.08■□□□□ 0.16
SNAPC1-201ENST00000216294 DPYSQ14117 519 aa16.08■□□□□ 0.16
SNAPC1-201ENST00000216294 USP10Q14694 798 aaKnown RBP16.08■□□□□ 0.16
SNAPC1-201ENST00000216294 CNGA3Q16281 694 aa16.08■□□□□ 0.16
SNAPC1-201ENST00000216294 LAYNQ6UX15 382 aa16.08■□□□□ 0.16
SNAPC1-201ENST00000216294 LSMEM2Q8N112 164 aa16.08■□□□□ 0.16
SNAPC1-201ENST00000216294 BEST2Q8NFU1 509 aa16.08■□□□□ 0.16
SNAPC1-201ENST00000216294 NXNL1Q96CM4 212 aa16.08■□□□□ 0.16
SNAPC1-201ENST00000216294 ULBP1Q9BZM6 244 aa16.08■□□□□ 0.16
SNAPC1-201ENST00000216294 FAM192AQ9GZU8 254 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms