RNA–Protein interactions for RNA: ENST00000055335.10

PPP1R3F-201, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PPP1R3F, Length 3,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-201ENST00000055335 CBR4Q8N4T8 237 aa20.38■□□□□ 0.85
PPP1R3F-201ENST00000055335 TMEM114B3SHH9 223 aa20.38■□□□□ 0.85
PPP1R3F-201ENST00000055335 EEF1B2P24534 225 aaKnown RBP20.38■□□□□ 0.85
PPP1R3F-201ENST00000055335 QSER1Q2KHR3 1735 aa20.38■□□□□ 0.85
PPP1R3F-201ENST00000055335 ZNF280DQ6N043 979 aa20.38■□□□□ 0.85
PPP1R3F-201ENST00000055335 LCLAT1Q6UWP7 414 aa20.38■□□□□ 0.85
PPP1R3F-201ENST00000055335 C4orf22Q6V702 233 aa20.38■□□□□ 0.85
PPP1R3F-201ENST00000055335 SETD3Q86TU7 594 aaPredicted RBP20.38■□□□□ 0.85
PPP1R3F-201ENST00000055335 KHSRPQ92945 711 aaKnown RBP eCLIP20.38■□□□□ 0.85
PPP1R3F-201ENST00000055335 ZNF214Q9UL59 606 aaPredicted RBP20.38■□□□□ 0.85
PPP1R3F-201ENST00000055335 SH3PXD2BA1X283 911 aa20.37■□□□□ 0.85
PPP1R3F-201ENST00000055335 HEATR9A2RTY3 570 aa20.37■□□□□ 0.85
PPP1R3F-201ENST00000055335 ACKR2O00590 384 aa20.37■□□□□ 0.85
PPP1R3F-201ENST00000055335 MDM4O15151 490 aa20.37■□□□□ 0.85
PPP1R3F-201ENST00000055335 MT-ND1P03886 318 aa20.37■□□□□ 0.85
PPP1R3F-201ENST00000055335 OCM2P0CE71 109 aa20.37■□□□□ 0.85
PPP1R3F-201ENST00000055335 OCMP0CE72 109 aaPredicted RBP20.37■□□□□ 0.85
PPP1R3F-201ENST00000055335 GHRHRQ02643 423 aa20.37■□□□□ 0.85
PPP1R3F-201ENST00000055335 TMEM132DQ14C87 1099 aa20.37■□□□□ 0.85
PPP1R3F-201ENST00000055335 GFM2Q969S9 779 aaKnown RBP20.37■□□□□ 0.85
PPP1R3F-201ENST00000055335 KIF12Q96FN5 646 aa20.37■□□□□ 0.85
PPP1R3F-201ENST00000055335 TEX13BQ9BXU2 312 aa20.37■□□□□ 0.85
PPP1R3F-201ENST00000055335 NIFKQ9BYG3 293 aaKnown RBP20.37■□□□□ 0.85
PPP1R3F-201ENST00000055335 NAA50Q9GZZ1 169 aaKnown RBP20.37■□□□□ 0.85
PPP1R3F-201ENST00000055335 FAIMQ9NVQ4 179 aa20.37■□□□□ 0.85
PPP1R3F-201ENST00000055335 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.37■□□□□ 0.85
PPP1R3F-201ENST00000055335 ZBTB11O95625 1053 aaPredicted RBP20.37■□□□□ 0.85
PPP1R3F-201ENST00000055335 NR2C2P49116 596 aa20.37■□□□□ 0.85
PPP1R3F-201ENST00000055335 HSDL1Q3SXM5 330 aa20.37■□□□□ 0.85
PPP1R3F-201ENST00000055335 EFCAB12Q6NXP0 572 aa20.37■□□□□ 0.85
PPP1R3F-201ENST00000055335 CNDP1Q96KN2 507 aa20.37■□□□□ 0.85
PPP1R3F-201ENST00000055335 EFHD1Q9BUP0 239 aa20.37■□□□□ 0.85
PPP1R3F-201ENST00000055335 DRC3Q9H069 523 aa20.37■□□□□ 0.85
PPP1R3F-201ENST00000055335 CHST12Q9NRB3 414 aa20.37■□□□□ 0.85
PPP1R3F-201ENST00000055335 KIAA1217Q5T5P2 1943 aa20.37■□□□□ 0.85
PPP1R3F-201ENST00000055335 ATE1O95260 518 aa20.37■□□□□ 0.85
PPP1R3F-201ENST00000055335 FASTKQ14296 549 aaKnown RBP20.37■□□□□ 0.85
PPP1R3F-201ENST00000055335 CHSY3Q70JA7 882 aa20.37■□□□□ 0.85
PPP1R3F-201ENST00000055335 LRRC43Q8N309 656 aa20.37■□□□□ 0.85
PPP1R3F-201ENST00000055335 NXNL1Q96CM4 212 aa20.37■□□□□ 0.85
PPP1R3F-201ENST00000055335 SLC2A11Q9BYW1 496 aa20.37■□□□□ 0.85
PPP1R3F-201ENST00000055335 DPEP3Q9H4B8 488 aa20.37■□□□□ 0.85
PPP1R3F-201ENST00000055335 SULT1E1P49888 294 aa20.36■□□□□ 0.85
PPP1R3F-201ENST00000055335 SLC7A2P52569 658 aa20.36■□□□□ 0.85
PPP1R3F-201ENST00000055335 C21orf59P57076 290 aa20.36■□□□□ 0.85
PPP1R3F-201ENST00000055335 GRM1Q13255 1194 aa20.36■□□□□ 0.85
PPP1R3F-201ENST00000055335 MXD4Q14582 209 aaPredicted RBP20.36■□□□□ 0.85
PPP1R3F-201ENST00000055335 DPYSL2Q16555 572 aa20.36■□□□□ 0.85
PPP1R3F-201ENST00000055335 FGD3Q5JSP0 725 aa20.36■□□□□ 0.85
PPP1R3F-201ENST00000055335 TMEM26Q6ZUK4 368 aa20.36■□□□□ 0.85
PPP1R3F-201ENST00000055335 PHF21BQ96EK2 531 aa20.36■□□□□ 0.85
PPP1R3F-201ENST00000055335 POLR1BQ9H9Y6 1135 aa20.36■□□□□ 0.85
PPP1R3F-201ENST00000055335 CXorf21Q9HAI6 301 aa20.36■□□□□ 0.85
PPP1R3F-201ENST00000055335 CNOT6Q9ULM6 557 aaKnown RBP20.36■□□□□ 0.85
PPP1R3F-201ENST00000055335 TRIM43BA6NCK2 446 aa20.36■□□□□ 0.85
PPP1R3F-201ENST00000055335 C9IYK1 514 aa20.36■□□□□ 0.85
PPP1R3F-201ENST00000055335 PPEF2O14830 753 aa20.36■□□□□ 0.85
PPP1R3F-201ENST00000055335 FARP2O94887 1054 aaPredicted RBP20.36■□□□□ 0.85
PPP1R3F-201ENST00000055335 NMBRP28336 390 aa20.36■□□□□ 0.85
PPP1R3F-201ENST00000055335 GNL1P36915 607 aaPredicted RBP20.36■□□□□ 0.85
PPP1R3F-201ENST00000055335 PLCL1Q15111 1095 aa20.36■□□□□ 0.85
PPP1R3F-201ENST00000055335 SPANXN3Q5MJ09 141 aa20.36■□□□□ 0.85
PPP1R3F-201ENST00000055335 BORAQ6PGQ7 559 aa20.36■□□□□ 0.85
PPP1R3F-201ENST00000055335 NAT9Q9BTE0 207 aa20.36■□□□□ 0.85
PPP1R3F-201ENST00000055335 DPP3Q9NY33 737 aa20.36■□□□□ 0.85
PPP1R3F-201ENST00000055335 GABBR2O75899 941 aa20.36■□□□□ 0.85
PPP1R3F-201ENST00000055335 DDHD2O94830 711 aa20.36■□□□□ 0.85
PPP1R3F-201ENST00000055335 MLNP12872 115 aa20.36■□□□□ 0.85
PPP1R3F-201ENST00000055335 CTBSQ01459 385 aa20.36■□□□□ 0.85
PPP1R3F-201ENST00000055335 TRAF2Q12933 501 aa20.36■□□□□ 0.85
PPP1R3F-201ENST00000055335 GEN1Q17RS7 908 aa20.36■□□□□ 0.85
PPP1R3F-201ENST00000055335 LDLRAP1Q5SW96 308 aa20.36■□□□□ 0.85
PPP1R3F-201ENST00000055335 ELMSAN1Q6PJG2 1045 aa20.36■□□□□ 0.85
PPP1R3F-201ENST00000055335 NT5DC4Q86YG4 428 aa20.36■□□□□ 0.85
PPP1R3F-201ENST00000055335 SEPT1Q8WYJ6 367 aa20.36■□□□□ 0.85
PPP1R3F-201ENST00000055335 ASB9Q96DX5 294 aa20.36■□□□□ 0.85
PPP1R3F-201ENST00000055335 ZNF232Q9UNY5 417 aa20.36■□□□□ 0.85
PPP1R3F-201ENST00000055335 PCDHGA7Q9Y5G6 932 aa20.36■□□□□ 0.85
PPP1R3F-201ENST00000055335 AHDC1Q5TGY3 1603 aaPredicted RBP20.36■□□□□ 0.85
PPP1R3F-201ENST00000055335 DLX3O60479 287 aa20.35■□□□□ 0.85
PPP1R3F-201ENST00000055335 MPOP05164 745 aa20.35■□□□□ 0.85
PPP1R3F-201ENST00000055335 COL6A2P12110 1019 aa20.35■□□□□ 0.85
PPP1R3F-201ENST00000055335 TARBP2Q15633 366 aaKnown RBP20.35■□□□□ 0.85
PPP1R3F-201ENST00000055335 DDHD1Q8NEL9 900 aa20.35■□□□□ 0.85
PPP1R3F-201ENST00000055335 UPF3AQ9H1J1 476 aaKnown RBP20.35■□□□□ 0.85
PPP1R3F-201ENST00000055335 TRNAU1APQ9NX07 287 aaKnown RBP20.35■□□□□ 0.85
PPP1R3F-201ENST00000055335 LTBP1Q14766 1721 aa20.35■□□□□ 0.85
PPP1R3F-201ENST00000055335 NR4A1P22736 598 aa20.35■□□□□ 0.85
PPP1R3F-201ENST00000055335 RXRGP48443 463 aa20.35■□□□□ 0.85
PPP1R3F-201ENST00000055335 RABGGTBP53611 331 aa20.35■□□□□ 0.85
PPP1R3F-201ENST00000055335 EN1Q05925 392 aaPredicted RBP20.35■□□□□ 0.85
PPP1R3F-201ENST00000055335 NBPF12Q5TAG4 269 aaPredicted RBP20.35■□□□□ 0.85
PPP1R3F-201ENST00000055335 DENND6AQ8IWF6 608 aa20.35■□□□□ 0.85
PPP1R3F-201ENST00000055335 FBXL20Q96IG2 436 aa20.35■□□□□ 0.85
PPP1R3F-201ENST00000055335 ZNF597Q96LX8 424 aa20.35■□□□□ 0.85
PPP1R3F-201ENST00000055335 CD247P20963 164 aa20.34■□□□□ 0.85
PPP1R3F-201ENST00000055335 BACE1P56817 501 aa20.34■□□□□ 0.85
PPP1R3F-201ENST00000055335 RHDQ02161 417 aa20.34■□□□□ 0.85
PPP1R3F-201ENST00000055335 TBCELQ5QJ74 424 aa20.34■□□□□ 0.85
PPP1R3F-201ENST00000055335 CARM1Q86X55 608 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms