RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 C2orf49Q9BVC5 232 aaPredicted RBP17.12■□□□□ 0.33
PHGDH-213ENST00000641272 WDCPQ9H6R7 721 aa17.12■□□□□ 0.33
PHGDH-213ENST00000641272 TBC1D30Q9Y2I9 924 aa17.12■□□□□ 0.33
PHGDH-213ENST00000641272 BAHCC1Q9P281 2608 aa17.12■□□□□ 0.33
PHGDH-213ENST00000641272 A0A1W2PQU0 124 aa17.11■□□□□ 0.33
PHGDH-213ENST00000641272 CYP11B1P15538 503 aa17.11■□□□□ 0.33
PHGDH-213ENST00000641272 CXCR3P49682 368 aa17.11■□□□□ 0.33
PHGDH-213ENST00000641272 SNX16P57768 344 aa17.11■□□□□ 0.33
PHGDH-213ENST00000641272 KRT83P78385 493 aa17.11■□□□□ 0.33
PHGDH-213ENST00000641272 STAT4Q14765 748 aa17.11■□□□□ 0.33
PHGDH-213ENST00000641272 VWA3BQ502W6 1294 aa17.11■□□□□ 0.33
PHGDH-213ENST00000641272 SFMBT2Q5VUG0 894 aa17.11■□□□□ 0.33
PHGDH-213ENST00000641272 DPY19L2P1Q6NXN4 242 aa17.11■□□□□ 0.33
PHGDH-213ENST00000641272 FAM131BQ86XD5 332 aa17.11■□□□□ 0.33
PHGDH-213ENST00000641272 XYLT1Q86Y38 959 aa17.11■□□□□ 0.33
PHGDH-213ENST00000641272 FAM114A1Q8IWE2 563 aa17.11■□□□□ 0.33
PHGDH-213ENST00000641272 ZNF683Q8IZ20 524 aa17.11■□□□□ 0.33
PHGDH-213ENST00000641272 OXR1Q8N573 874 aa17.11■□□□□ 0.33
PHGDH-213ENST00000641272 PDCD7Q8N8D1 485 aaKnown RBP17.11■□□□□ 0.33
PHGDH-213ENST00000641272 DCAF4L2Q8NA75 395 aa17.11■□□□□ 0.33
PHGDH-213ENST00000641272 MLKLQ8NB16 471 aa17.11■□□□□ 0.33
PHGDH-213ENST00000641272 TUBGCP2Q9BSJ2 902 aa17.11■□□□□ 0.33
PHGDH-213ENST00000641272 CLSTN2Q9H4D0 955 aa17.11■□□□□ 0.33
PHGDH-213ENST00000641272 TPX2Q9ULW0 747 aaKnown RBP17.11■□□□□ 0.33
PHGDH-213ENST00000641272 DMTF1Q9Y222 760 aa17.11■□□□□ 0.33
PHGDH-213ENST00000641272 HS3ST2Q9Y278 367 aa17.11■□□□□ 0.33
PHGDH-213ENST00000641272 TDRD6O60522 2096 aaKnown RBP17.11■□□□□ 0.33
PHGDH-213ENST00000641272 E9PAM4 449 aa17.1■□□□□ 0.33
PHGDH-213ENST00000641272 JUPP14923 745 aa17.1■□□□□ 0.33
PHGDH-213ENST00000641272 CHRNA3P32297 505 aa17.1■□□□□ 0.33
PHGDH-213ENST00000641272 HNF1BP35680 557 aa17.1■□□□□ 0.33
PHGDH-213ENST00000641272 VASPP50552 380 aaPredicted RBP17.1■□□□□ 0.33
PHGDH-213ENST00000641272 C5orf22Q49AR2 442 aa17.1■□□□□ 0.33
PHGDH-213ENST00000641272 SEL1L3Q68CR1 1132 aa17.1■□□□□ 0.33
PHGDH-213ENST00000641272 KANSL1Q7Z3B3 1105 aa17.1■□□□□ 0.33
PHGDH-213ENST00000641272 NOP9Q86U38 636 aaKnown RBP17.1■□□□□ 0.33
PHGDH-213ENST00000641272 TMPRSS12Q86WS5 348 aa17.1■□□□□ 0.33
PHGDH-213ENST00000641272 ZDHHC17Q8IUH5 632 aa17.1■□□□□ 0.33
PHGDH-213ENST00000641272 OR2A12Q8NGT7 310 aa17.1■□□□□ 0.33
PHGDH-213ENST00000641272 NXPE2Q96DL1 559 aa17.1■□□□□ 0.33
PHGDH-213ENST00000641272 CCDC114Q96M63 670 aa17.1■□□□□ 0.33
PHGDH-213ENST00000641272 CFAP57Q96MR6 1250 aa17.1■□□□□ 0.33
PHGDH-213ENST00000641272 PPP1R9BQ96SB3 815 aa17.1■□□□□ 0.33
PHGDH-213ENST00000641272 SPON2Q9BUD6 331 aa17.1■□□□□ 0.33
PHGDH-213ENST00000641272 CALN1Q9BXU9 219 aa17.1■□□□□ 0.33
PHGDH-213ENST00000641272 KDM4CQ9H3R0 1056 aa17.1■□□□□ 0.33
PHGDH-213ENST00000641272 PREBQ9HCU5 417 aa17.1■□□□□ 0.33
PHGDH-213ENST00000641272 DYRK4Q9NR20 520 aa17.1■□□□□ 0.33
PHGDH-213ENST00000641272 RRN3Q9NYV6 651 aa17.1■□□□□ 0.33
PHGDH-213ENST00000641272 DKK4Q9UBT3 224 aa17.1■□□□□ 0.33
PHGDH-213ENST00000641272 PCDHGA1Q9Y5H4 931 aa17.1■□□□□ 0.33
PHGDH-213ENST00000641272 ACTL7AQ9Y615 435 aa17.1■□□□□ 0.33
PHGDH-213ENST00000641272 ARID1BQ8NFD5 2236 aaPredicted RBP17.09■□□□□ 0.33
PHGDH-213ENST00000641272 PRAMEF26H0Y7S4 382 aa17.09■□□□□ 0.33
PHGDH-213ENST00000641272 FFAR2O15552 330 aa17.09■□□□□ 0.33
PHGDH-213ENST00000641272 SRGAP2O75044 1071 aa17.09■□□□□ 0.33
PHGDH-213ENST00000641272 MMEP08473 750 aa17.09■□□□□ 0.33
PHGDH-213ENST00000641272 THEGLP0DJG4 465 aa17.09■□□□□ 0.33
PHGDH-213ENST00000641272 CDH5P33151 784 aaPredicted RBP17.09■□□□□ 0.33
PHGDH-213ENST00000641272 RXRGP48443 463 aa17.09■□□□□ 0.33
PHGDH-213ENST00000641272 CLDN2P57739 230 aa17.09■□□□□ 0.33
PHGDH-213ENST00000641272 KCNMA1Q12791 1236 aa17.09■□□□□ 0.33
PHGDH-213ENST00000641272 MTA1Q13330 715 aa17.09■□□□□ 0.33
PHGDH-213ENST00000641272 RAB6CQ53S08 254 aa17.09■□□□□ 0.33
PHGDH-213ENST00000641272 NAA35Q5VZE5 725 aa17.09■□□□□ 0.33
PHGDH-213ENST00000641272 LRRC31Q6UY01 552 aa17.09■□□□□ 0.33
PHGDH-213ENST00000641272 PHLDB2Q86SQ0 1253 aa17.09■□□□□ 0.33
PHGDH-213ENST00000641272 ERICH1Q86X53 443 aa17.09■□□□□ 0.33
PHGDH-213ENST00000641272 DRC7Q8IY82 874 aa17.09■□□□□ 0.33
PHGDH-213ENST00000641272 EMC1Q8N766 993 aa17.09■□□□□ 0.33
PHGDH-213ENST00000641272 SLC20A1Q8WUM9 679 aa17.09■□□□□ 0.33
PHGDH-213ENST00000641272 C18orf8Q96DM3 657 aa17.09■□□□□ 0.33
PHGDH-213ENST00000641272 RAB6CQ9H0N0 254 aa17.09■□□□□ 0.33
PHGDH-213ENST00000641272 ERVMER34-1Q9H9K5 563 aa17.09■□□□□ 0.33
PHGDH-213ENST00000641272 METTL5Q9NRN9 209 aaKnown RBP17.09■□□□□ 0.33
PHGDH-213ENST00000641272 TAB2Q9NYJ8 693 aa17.09■□□□□ 0.33
PHGDH-213ENST00000641272 FARP1Q9Y4F1 1045 aaPredicted RBP17.09■□□□□ 0.33
PHGDH-213ENST00000641272 URB1O60287 2271 aaKnown RBP17.08■□□□□ 0.33
PHGDH-213ENST00000641272 TRIM38O00635 465 aa17.08■□□□□ 0.32
PHGDH-213ENST00000641272 PCDH8O95206 1070 aa17.08■□□□□ 0.32
PHGDH-213ENST00000641272 OR1E1P30953 314 aa17.08■□□□□ 0.32
PHGDH-213ENST00000641272 BPIFB4P59827 614 aa17.08■□□□□ 0.32
PHGDH-213ENST00000641272 ATP11AP98196 1134 aa17.08■□□□□ 0.32
PHGDH-213ENST00000641272 SEMG2Q02383 582 aa17.08■□□□□ 0.32
PHGDH-213ENST00000641272 TARDBPQ13148 414 aaKnown RBP eCLIP17.08■□□□□ 0.32
PHGDH-213ENST00000641272 CDO1Q16878 200 aa17.08■□□□□ 0.32
PHGDH-213ENST00000641272 SLC25A52Q3SY17 297 aa17.08■□□□□ 0.32
PHGDH-213ENST00000641272 ARSIQ5FYB1 569 aa17.08■□□□□ 0.32
PHGDH-213ENST00000641272 C6orf118Q5T5N4 469 aa17.08■□□□□ 0.32
PHGDH-213ENST00000641272 KLHDC7AQ5VTJ3 777 aa17.08■□□□□ 0.32
PHGDH-213ENST00000641272 DPY19L3Q6ZPD9 716 aa17.08■□□□□ 0.32
PHGDH-213ENST00000641272 SETD3Q86TU7 594 aaPredicted RBP17.08■□□□□ 0.32
PHGDH-213ENST00000641272 IQCHQ86VS3 1027 aa17.08■□□□□ 0.32
PHGDH-213ENST00000641272 HORMAD1Q86X24 394 aa17.08■□□□□ 0.32
PHGDH-213ENST00000641272 TMEM145Q8NBT3 493 aa17.08■□□□□ 0.32
PHGDH-213ENST00000641272 OR13H1Q8NG92 308 aa17.08■□□□□ 0.32
PHGDH-213ENST00000641272 CPA5Q8WXQ8 436 aa17.08■□□□□ 0.32
PHGDH-213ENST00000641272 TSC1Q92574 1164 aa17.08■□□□□ 0.32
PHGDH-213ENST00000641272 PGAP3Q96FM1 320 aaPredicted RBP17.08■□□□□ 0.32
PHGDH-213ENST00000641272 KLHDC7BQ96G42 594 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms