RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 KLHL25Q9H0H3 589 aa13.99□□□□□ -0.17
SCARB2-227ENST00000640957 MARCH7Q9H992 704 aa13.99□□□□□ -0.17
SCARB2-227ENST00000640957 PCDHA11Q9Y5I1 949 aa13.99□□□□□ -0.17
SCARB2-227ENST00000640957 KDM1AO60341 852 aa13.98□□□□□ -0.17
SCARB2-227ENST00000640957 SPAG6O75602 509 aa13.98□□□□□ -0.17
SCARB2-227ENST00000640957 GARTP22102 1010 aa13.98□□□□□ -0.17
SCARB2-227ENST00000640957 POLR2BP30876 1174 aaKnown RBP13.98□□□□□ -0.17
SCARB2-227ENST00000640957 PTGER2P43116 358 aa13.98□□□□□ -0.17
SCARB2-227ENST00000640957 SPIDRQ14159 915 aa13.98□□□□□ -0.17
SCARB2-227ENST00000640957 LYSMD3Q7Z3D4 306 aa13.98□□□□□ -0.17
SCARB2-227ENST00000640957 TBC1D15Q8TC07 691 aa13.98□□□□□ -0.17
SCARB2-227ENST00000640957 TANKQ92844 425 aa13.98□□□□□ -0.17
SCARB2-227ENST00000640957 MFSD3Q96ES6 412 aa13.98□□□□□ -0.17
SCARB2-227ENST00000640957 SLC38A10Q9HBR0 1119 aa13.98□□□□□ -0.17
SCARB2-227ENST00000640957 POU2F3Q9UKI9 436 aa13.98□□□□□ -0.17
SCARB2-227ENST00000640957 COPG1Q9Y678 874 aaKnown RBP13.98□□□□□ -0.17
SCARB2-227ENST00000640957 CDY2AQ9Y6F7 541 aa13.98□□□□□ -0.17
SCARB2-227ENST00000640957 CDY1Q9Y6F8 540 aa13.98□□□□□ -0.17
SCARB2-227ENST00000640957 E2F6O75461 281 aa13.98□□□□□ -0.17
SCARB2-227ENST00000640957 ASS1P00966 412 aaKnown RBP13.98□□□□□ -0.17
SCARB2-227ENST00000640957 HMOX2P30519 316 aa13.98□□□□□ -0.17
SCARB2-227ENST00000640957 HSD17B4P51659 736 aa13.98□□□□□ -0.17
SCARB2-227ENST00000640957 PSME3P61289 254 aa13.98□□□□□ -0.17
SCARB2-227ENST00000640957 RAB39AQ14964 217 aa13.98□□□□□ -0.17
SCARB2-227ENST00000640957 TRIM16LQ309B1 348 aa13.98□□□□□ -0.17
SCARB2-227ENST00000640957 AGKQ53H12 422 aa13.98□□□□□ -0.17
SCARB2-227ENST00000640957 FAM35AQ86V20 835 aa13.98□□□□□ -0.17
SCARB2-227ENST00000640957 CASP10Q92851 521 aa13.98□□□□□ -0.17
SCARB2-227ENST00000640957 SLC2A11Q9BYW1 496 aa13.98□□□□□ -0.17
SCARB2-227ENST00000640957 ILKAPQ9H0C8 392 aaPredicted RBP13.98□□□□□ -0.17
SCARB2-227ENST00000640957 RPF2Q9H7B2 306 aaKnown RBP13.98□□□□□ -0.17
SCARB2-227ENST00000640957 DAPK2Q9UIK4 370 aa13.98□□□□□ -0.17
SCARB2-227ENST00000640957 SCN9AQ15858 1988 aa13.98□□□□□ -0.17
SCARB2-227ENST00000640957 VWA5AO00534 786 aa13.98□□□□□ -0.17
SCARB2-227ENST00000640957 TRDMT1O14717 391 aaKnown RBP13.98□□□□□ -0.17
SCARB2-227ENST00000640957 DGAT1O75907 488 aa13.98□□□□□ -0.17
SCARB2-227ENST00000640957 PAX3P23760 479 aa13.98□□□□□ -0.17
SCARB2-227ENST00000640957 SFNP31947 248 aa13.98□□□□□ -0.17
SCARB2-227ENST00000640957 METTL21CQ5VZV1 264 aa13.98□□□□□ -0.17
SCARB2-227ENST00000640957 FSTL4Q6MZW2 842 aa13.98□□□□□ -0.17
SCARB2-227ENST00000640957 GADL1Q6ZQY3 521 aa13.98□□□□□ -0.17
SCARB2-227ENST00000640957 DNAAF3Q8N9W5 541 aa13.98□□□□□ -0.17
SCARB2-227ENST00000640957 MCPH1Q8NEM0 835 aa13.98□□□□□ -0.17
SCARB2-227ENST00000640957 OR52K1Q8NGK4 314 aa13.98□□□□□ -0.17
SCARB2-227ENST00000640957 CXorf38Q8TB03 319 aa13.98□□□□□ -0.17
SCARB2-227ENST00000640957 CLEC4CQ8WTT0 213 aa13.98□□□□□ -0.17
SCARB2-227ENST00000640957 CDKL2Q92772 493 aa13.98□□□□□ -0.17
SCARB2-227ENST00000640957 SLCO4A1Q96BD0 722 aa13.98□□□□□ -0.17
SCARB2-227ENST00000640957 FCRL3Q96P31 734 aaPredicted RBP13.98□□□□□ -0.17
SCARB2-227ENST00000640957 SNRNP25Q9BV90 132 aaKnown RBP13.98□□□□□ -0.17
SCARB2-227ENST00000640957 NDEL1Q9GZM8 345 aa13.98□□□□□ -0.17
SCARB2-227ENST00000640957 NIF3L1Q9GZT8 377 aa13.98□□□□□ -0.17
SCARB2-227ENST00000640957 ZNF302Q9NR11 478 aa13.98□□□□□ -0.17
SCARB2-227ENST00000640957 EVLQ9UI08 416 aaPredicted RBP13.98□□□□□ -0.17
SCARB2-227ENST00000640957 CNTNAP1P78357 1384 aa13.97□□□□□ -0.17
SCARB2-227ENST00000640957 CYP3A5P20815 502 aa13.97□□□□□ -0.17
SCARB2-227ENST00000640957 SEPT6Q14141 434 aa13.97□□□□□ -0.17
SCARB2-227ENST00000640957 OTUD3Q5T2D3 398 aaPredicted RBP13.97□□□□□ -0.17
SCARB2-227ENST00000640957 SPPL2CQ8IUH8 684 aa13.97□□□□□ -0.17
SCARB2-227ENST00000640957 SAMD3Q8N6K7 520 aa13.97□□□□□ -0.17
SCARB2-227ENST00000640957 TMCO5AQ8N6Q1 288 aa13.97□□□□□ -0.17
SCARB2-227ENST00000640957 SLC4A11Q8NBS3 891 aa13.97□□□□□ -0.17
SCARB2-227ENST00000640957 CGRRF1Q99675 332 aa13.97□□□□□ -0.17
SCARB2-227ENST00000640957 MRPL46Q9H2W6 279 aaKnown RBP13.97□□□□□ -0.17
SCARB2-227ENST00000640957 ST6GALNAC4Q9H4F1 302 aa13.97□□□□□ -0.17
SCARB2-227ENST00000640957 EFCAB1Q9HAE3 211 aa13.97□□□□□ -0.17
SCARB2-227ENST00000640957 GPRC5DQ9NZD1 345 aa13.97□□□□□ -0.17
SCARB2-227ENST00000640957 PIM2Q9P1W9 311 aa13.97□□□□□ -0.17
SCARB2-227ENST00000640957 WARS2Q9UGM6 360 aaKnown RBP13.97□□□□□ -0.17
SCARB2-227ENST00000640957 DCDC2Q9UHG0 476 aa13.97□□□□□ -0.17
SCARB2-227ENST00000640957 ACOT8O14734 319 aa13.97□□□□□ -0.17
SCARB2-227ENST00000640957 CBFA2T3O75081 653 aa13.97□□□□□ -0.17
SCARB2-227ENST00000640957 MICAL2O94851 1124 aa13.97□□□□□ -0.17
SCARB2-227ENST00000640957 C2P06681 752 aa13.97□□□□□ -0.17
SCARB2-227ENST00000640957 CYP2F1P24903 491 aa13.97□□□□□ -0.17
SCARB2-227ENST00000640957 PSMB4P28070 264 aa13.97□□□□□ -0.17
SCARB2-227ENST00000640957 ALDH3B2P48448 385 aa13.97□□□□□ -0.17
SCARB2-227ENST00000640957 TNFAIP1Q13829 316 aa13.97□□□□□ -0.17
SCARB2-227ENST00000640957 AMHR2Q16671 573 aa13.97□□□□□ -0.17
SCARB2-227ENST00000640957 HEATR6Q6AI08 1181 aaKnown RBP13.97□□□□□ -0.17
SCARB2-227ENST00000640957 FAM183BPQ6ZVS7 135 aa13.97□□□□□ -0.17
SCARB2-227ENST00000640957 SAPCD2Q86UD0 394 aa13.97□□□□□ -0.17
SCARB2-227ENST00000640957 COLGALT1Q8NBJ5 622 aa13.97□□□□□ -0.17
SCARB2-227ENST00000640957 KCTD4Q8WVF5 259 aa13.97□□□□□ -0.17
SCARB2-227ENST00000640957 TRAPPC12Q8WVT3 735 aa13.97□□□□□ -0.17
SCARB2-227ENST00000640957 TAMM41Q96BW9 452 aa13.97□□□□□ -0.17
SCARB2-227ENST00000640957 MIR1-1HGQ9H1L0 117 aa13.97□□□□□ -0.17
SCARB2-227ENST00000640957 FBRSL1Q9HCM7 1045 aaKnown RBP13.97□□□□□ -0.17
SCARB2-227ENST00000640957 PNPLA3Q9NST1 481 aa13.97□□□□□ -0.17
SCARB2-227ENST00000640957 CNOT6Q9ULM6 557 aaKnown RBP13.97□□□□□ -0.17
SCARB2-227ENST00000640957 MICAL3Q7RTP6 2002 aa13.97□□□□□ -0.17
SCARB2-227ENST00000640957 BCAS2O75934 225 aaPredicted RBP13.96□□□□□ -0.17
SCARB2-227ENST00000640957 CHRM3P20309 590 aa13.96□□□□□ -0.17
SCARB2-227ENST00000640957 TCEA1P23193 301 aaKnown RBP13.96□□□□□ -0.17
SCARB2-227ENST00000640957 GRK2P25098 689 aa13.96□□□□□ -0.17
SCARB2-227ENST00000640957 PRKCQQ04759 706 aa13.96□□□□□ -0.17
SCARB2-227ENST00000640957 PPP1R8Q12972 351 aaKnown RBP13.96□□□□□ -0.17
SCARB2-227ENST00000640957 CAPRIN1Q14444 709 aaKnown RBP13.96□□□□□ -0.17
SCARB2-227ENST00000640957 KCTD8Q6ZWB6 473 aa13.96□□□□□ -0.17
SCARB2-227ENST00000640957 C7orf31Q8N865 590 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms