RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 CRYBG2Q8N1P7 616 aa14.28□□□□□ -0.12
CACNA1A-228ENST00000636610 RAB3IL1Q8TBN0 382 aa14.28□□□□□ -0.12
CACNA1A-228ENST00000636610 ACTRT2Q8TDY3 377 aa14.28□□□□□ -0.12
CACNA1A-228ENST00000636610 NXNL1Q96CM4 212 aa14.28□□□□□ -0.12
CACNA1A-228ENST00000636610 TNIP3Q96KP6 325 aa14.28□□□□□ -0.12
CACNA1A-228ENST00000636610 NPY6RQ99463 290 aa14.28□□□□□ -0.12
CACNA1A-228ENST00000636610 C1orf21Q9H246 121 aa14.28□□□□□ -0.12
CACNA1A-228ENST00000636610 GTSE1Q9NYZ3 720 aa14.28□□□□□ -0.12
CACNA1A-228ENST00000636610 XPR1Q9UBH6 696 aa14.28□□□□□ -0.12
CACNA1A-228ENST00000636610 CDY2AQ9Y6F7 541 aa14.28□□□□□ -0.12
CACNA1A-228ENST00000636610 CDY1Q9Y6F8 540 aa14.28□□□□□ -0.12
CACNA1A-228ENST00000636610 DCLK1O15075 740 aa14.28□□□□□ -0.12
CACNA1A-228ENST00000636610 MLNP12872 115 aa14.28□□□□□ -0.12
CACNA1A-228ENST00000636610 TFEBP19484 476 aa14.28□□□□□ -0.12
CACNA1A-228ENST00000636610 NME5P56597 212 aa14.28□□□□□ -0.12
CACNA1A-228ENST00000636610 CCNA1P78396 465 aa14.28□□□□□ -0.12
CACNA1A-228ENST00000636610 TBCCQ15814 346 aa14.28□□□□□ -0.12
CACNA1A-228ENST00000636610 DGKDQ16760 1214 aa14.28□□□□□ -0.12
CACNA1A-228ENST00000636610 CMPK2Q5EBM0 449 aa14.28□□□□□ -0.12
CACNA1A-228ENST00000636610 EPGNQ6UW88 154 aa14.28□□□□□ -0.12
CACNA1A-228ENST00000636610 C4orf22Q6V702 233 aa14.28□□□□□ -0.12
CACNA1A-228ENST00000636610 LDB1Q86U70 411 aaPredicted RBP14.28□□□□□ -0.12
CACNA1A-228ENST00000636610 DSELQ8IZU8 1212 aa14.28□□□□□ -0.12
CACNA1A-228ENST00000636610 LRRC52Q8N7C0 313 aa14.28□□□□□ -0.12
CACNA1A-228ENST00000636610 SH3GL3Q99963 347 aa14.28□□□□□ -0.12
CACNA1A-228ENST00000636610 CRTAC1Q9NQ79 661 aa14.28□□□□□ -0.12
CACNA1A-228ENST00000636610 PPP2R3BQ9Y5P8 575 aa14.28□□□□□ -0.12
CACNA1A-228ENST00000636610 ATP6AP2A0A1C7CYW4 349 aa14.27□□□□□ -0.12
CACNA1A-228ENST00000636610 HACD1B0YJ81 288 aa14.27□□□□□ -0.12
CACNA1A-228ENST00000636610 C9JVG2 144 aa14.27□□□□□ -0.12
CACNA1A-228ENST00000636610 CXCL11O14625 94 aa14.27□□□□□ -0.12
CACNA1A-228ENST00000636610 XPO1O14980 1071 aaKnown RBP14.27□□□□□ -0.12
CACNA1A-228ENST00000636610 ATP6AP2O75787 350 aa14.27□□□□□ -0.12
CACNA1A-228ENST00000636610 LRIG2O94898 1065 aa14.27□□□□□ -0.12
CACNA1A-228ENST00000636610 AP2A1O95782 977 aa14.27□□□□□ -0.12
CACNA1A-228ENST00000636610 GABRB3P28472 473 aa14.27□□□□□ -0.12
CACNA1A-228ENST00000636610 ACADSBP45954 432 aa14.27□□□□□ -0.12
CACNA1A-228ENST00000636610 GLUD2P49448 558 aa14.27□□□□□ -0.12
CACNA1A-228ENST00000636610 HARS2P49590 506 aaKnown RBP14.27□□□□□ -0.12
CACNA1A-228ENST00000636610 DPYSQ14117 519 aa14.27□□□□□ -0.12
CACNA1A-228ENST00000636610 PDK3Q15120 406 aa14.27□□□□□ -0.12
CACNA1A-228ENST00000636610 CWF19L1Q69YN2 538 aaKnown RBP14.27□□□□□ -0.12
CACNA1A-228ENST00000636610 ESRP1Q6NXG1 681 aaKnown RBP14.27□□□□□ -0.12
CACNA1A-228ENST00000636610 SPATA24Q86W54 205 aa14.27□□□□□ -0.12
CACNA1A-228ENST00000636610 CEP97Q8IW35 865 aa14.27□□□□□ -0.12
CACNA1A-228ENST00000636610 FSTL5Q8N475 847 aaPredicted RBP14.27□□□□□ -0.12
CACNA1A-228ENST00000636610 ICA1LQ8NDH6 482 aa14.27□□□□□ -0.12
CACNA1A-228ENST00000636610 EXT2Q93063 718 aa14.27□□□□□ -0.12
CACNA1A-228ENST00000636610 DNAJC1Q96KC8 554 aaKnown RBP14.27□□□□□ -0.12
CACNA1A-228ENST00000636610 HSFY1Q96LI6 401 aa14.27□□□□□ -0.12
CACNA1A-228ENST00000636610 DNAJC28Q9NX36 388 aa14.27□□□□□ -0.12
CACNA1A-228ENST00000636610 ADA2Q9NZK5 511 aa14.27□□□□□ -0.12
CACNA1A-228ENST00000636610 IPPQ9Y573 584 aa14.27□□□□□ -0.12
CACNA1A-228ENST00000636610 ANKRD12Q6UB98 2062 aa14.27□□□□□ -0.13
CACNA1A-228ENST00000636610 SF3B1O75533 1304 aaKnown RBP eCLIP14.27□□□□□ -0.13
CACNA1A-228ENST00000636610 CCNT2O60583 730 aaKnown RBP14.27□□□□□ -0.13
CACNA1A-228ENST00000636610 AHSGP02765 367 aa14.27□□□□□ -0.13
CACNA1A-228ENST00000636610 FAM200BP0CF97 657 aa14.27□□□□□ -0.13
CACNA1A-228ENST00000636610 DARSP14868 501 aaKnown RBP14.27□□□□□ -0.13
CACNA1A-228ENST00000636610 ALDH1A3P47895 512 aa14.27□□□□□ -0.13
CACNA1A-228ENST00000636610 SATB1Q01826 763 aa14.27□□□□□ -0.13
CACNA1A-228ENST00000636610 CNGA3Q16281 694 aa14.27□□□□□ -0.13
CACNA1A-228ENST00000636610 NRF1Q16656 503 aa14.27□□□□□ -0.13
CACNA1A-228ENST00000636610 SPANXN3Q5MJ09 141 aa14.27□□□□□ -0.13
CACNA1A-228ENST00000636610 SEL1L3Q68CR1 1132 aa14.27□□□□□ -0.13
CACNA1A-228ENST00000636610 PGM2L1Q6PCE3 622 aa14.27□□□□□ -0.13
CACNA1A-228ENST00000636610 NT5DC4Q86YG4 428 aa14.27□□□□□ -0.13
CACNA1A-228ENST00000636610 IFNLR1Q8IU57 520 aaPredicted RBP14.27□□□□□ -0.13
CACNA1A-228ENST00000636610 BHLHE22Q8NFJ8 381 aaPredicted RBP14.27□□□□□ -0.13
CACNA1A-228ENST00000636610 PCED1BQ96HM7 432 aa14.27□□□□□ -0.13
CACNA1A-228ENST00000636610 WDCPQ9H6R7 721 aa14.27□□□□□ -0.13
CACNA1A-228ENST00000636610 DTNAQ9Y4J8 743 aa14.27□□□□□ -0.13
CACNA1A-228ENST00000636610 LTBP3Q9NS15 1303 aa14.26□□□□□ -0.13
CACNA1A-228ENST00000636610 A0A1B0GTW7 788 aa14.26□□□□□ -0.13
CACNA1A-228ENST00000636610 H3BNX3 289 aa14.26□□□□□ -0.13
CACNA1A-228ENST00000636610 PDHXO00330 501 aa14.26□□□□□ -0.13
CACNA1A-228ENST00000636610 MSI1O43347 362 aaKnown RBP14.26□□□□□ -0.13
CACNA1A-228ENST00000636610 DPP6P42658 865 aa14.26□□□□□ -0.13
CACNA1A-228ENST00000636610 SNX17Q15036 470 aa14.26□□□□□ -0.13
CACNA1A-228ENST00000636610 TLR1Q15399 786 aa14.26□□□□□ -0.13
CACNA1A-228ENST00000636610 FSCBQ5H9T9 825 aa14.26□□□□□ -0.13
CACNA1A-228ENST00000636610 C6orf52Q5T4I8 152 aa14.26□□□□□ -0.13
CACNA1A-228ENST00000636610 GALNT15Q8N3T1 639 aa14.26□□□□□ -0.13
CACNA1A-228ENST00000636610 APBB2Q92870 758 aa14.26□□□□□ -0.13
CACNA1A-228ENST00000636610 PHF21BQ96EK2 531 aa14.26□□□□□ -0.13
CACNA1A-228ENST00000636610 SLC10A4Q96EP9 437 aa14.26□□□□□ -0.13
CACNA1A-228ENST00000636610 GAD1Q99259 594 aa14.26□□□□□ -0.13
CACNA1A-228ENST00000636610 PCDHAC1Q9H158 963 aa14.26□□□□□ -0.13
CACNA1A-228ENST00000636610 PDP2Q9P2J9 529 aa14.26□□□□□ -0.13
CACNA1A-228ENST00000636610 UQCRBP14927 111 aa14.26□□□□□ -0.13
CACNA1A-228ENST00000636610 PMLP29590 882 aa14.26□□□□□ -0.13
CACNA1A-228ENST00000636610 RALGDSQ12967 914 aa14.26□□□□□ -0.13
CACNA1A-228ENST00000636610 ART3Q13508 389 aa14.26□□□□□ -0.13
CACNA1A-228ENST00000636610 ZNF792Q3KQV3 632 aa14.26□□□□□ -0.13
CACNA1A-228ENST00000636610 CCDC153Q494R4 210 aa14.26□□□□□ -0.13
CACNA1A-228ENST00000636610 LIN52Q52LA3 116 aa14.26□□□□□ -0.13
CACNA1A-228ENST00000636610 GK5Q6ZS86 529 aa14.26□□□□□ -0.13
CACNA1A-228ENST00000636610 CNTD1Q8N815 330 aa14.26□□□□□ -0.13
CACNA1A-228ENST00000636610 SCAMP5Q8TAC9 235 aa14.26□□□□□ -0.13
CACNA1A-228ENST00000636610 ZNF419Q96HQ0 510 aaPredicted RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms