RNA–Protein interactions for RNA: ENST00000635828.1

CDKL5-209, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5 BASIC

Gene CDKL5, Length 3,823 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-209ENST00000635828 APODP05090 189 aa8.7□□□□□ -1.02
CDKL5-209ENST00000635828 SRCP12931 536 aa8.7□□□□□ -1.02
CDKL5-209ENST00000635828 ECT2LQ008S8 904 aa8.7□□□□□ -1.02
CDKL5-209ENST00000635828 OTUD4Q01804 1114 aaKnown RBP8.7□□□□□ -1.02
CDKL5-209ENST00000635828 PDK2Q15119 407 aa8.7□□□□□ -1.02
CDKL5-209ENST00000635828 SYCE1Q8N0S2 351 aa8.7□□□□□ -1.02
CDKL5-209ENST00000635828 ACTL9Q8TC94 416 aa8.7□□□□□ -1.02
CDKL5-209ENST00000635828 PTPRN2Q92932 1015 aa8.7□□□□□ -1.02
CDKL5-209ENST00000635828 OSBPL9Q96SU4 736 aa8.7□□□□□ -1.02
CDKL5-209ENST00000635828 DDX50Q9BQ39 737 aaKnown RBP8.7□□□□□ -1.02
CDKL5-209ENST00000635828 CATSPERBQ9H7T0 1116 aa8.7□□□□□ -1.02
CDKL5-209ENST00000635828 ERVW-1Q9UQF0 538 aa8.7□□□□□ -1.02
CDKL5-209ENST00000635828 CTSLP07711 333 aa8.7□□□□□ -1.02
CDKL5-209ENST00000635828 POLR2EP19388 210 aaKnown RBP8.7□□□□□ -1.02
CDKL5-209ENST00000635828 C6orf118Q5T5N4 469 aa8.7□□□□□ -1.02
CDKL5-209ENST00000635828 PSTKQ8IV42 348 aaKnown RBP8.7□□□□□ -1.02
CDKL5-209ENST00000635828 MAML2Q8IZL2 1156 aaPredicted RBP8.7□□□□□ -1.02
CDKL5-209ENST00000635828 AHI1Q8N157 1196 aa8.7□□□□□ -1.02
CDKL5-209ENST00000635828 FAM160A2Q8N612 972 aaPredicted RBP8.7□□□□□ -1.02
CDKL5-209ENST00000635828 ATP11CQ8NB49 1132 aa8.7□□□□□ -1.02
CDKL5-209ENST00000635828 CCNYQ8ND76 341 aa8.7□□□□□ -1.02
CDKL5-209ENST00000635828 C8orf33Q9H7E9 229 aaPredicted RBP8.7□□□□□ -1.02
CDKL5-209ENST00000635828 CD248Q9HCU0 757 aa8.7□□□□□ -1.02
CDKL5-209ENST00000635828 TTLL3Q9Y4R7 772 aa8.7□□□□□ -1.02
CDKL5-209ENST00000635828 CKAP5Q14008 2032 aa8.7□□□□□ -1.02
CDKL5-209ENST00000635828 A0A0A0MRY4 1105 aa8.7□□□□□ -1.02
CDKL5-209ENST00000635828 WASH4PA8MWX3 477 aa8.7□□□□□ -1.02
CDKL5-209ENST00000635828 APOL1O14791 398 aa8.7□□□□□ -1.02
CDKL5-209ENST00000635828 EPHX1P07099 455 aa8.7□□□□□ -1.02
CDKL5-209ENST00000635828 AP1B1Q10567 949 aa8.7□□□□□ -1.02
CDKL5-209ENST00000635828 SRSF5Q13243 272 aaKnown RBP8.7□□□□□ -1.02
CDKL5-209ENST00000635828 ODF2Q5BJF6 829 aa8.7□□□□□ -1.02
CDKL5-209ENST00000635828 SETD3Q86TU7 594 aaPredicted RBP8.7□□□□□ -1.02
CDKL5-209ENST00000635828 RCOR2Q8IZ40 523 aa8.7□□□□□ -1.02
CDKL5-209ENST00000635828 FRS2Q8WU20 508 aa8.7□□□□□ -1.02
CDKL5-209ENST00000635828 TMEM121Q9BTD3 319 aa8.7□□□□□ -1.02
CDKL5-209ENST00000635828 TPSD1Q9BZJ3 242 aa8.7□□□□□ -1.02
CDKL5-209ENST00000635828 TMEM245Q9H330 911 aa8.7□□□□□ -1.02
CDKL5-209ENST00000635828 SEPT10Q9P0V9 454 aa8.7□□□□□ -1.02
CDKL5-209ENST00000635828 DNPEPQ9ULA0 475 aa8.7□□□□□ -1.02
CDKL5-209ENST00000635828 JRKLQ9Y4A0 524 aa8.7□□□□□ -1.02
CDKL5-209ENST00000635828 STON1Q9Y6Q2 735 aa8.7□□□□□ -1.02
CDKL5-209ENST00000635828 KMT2EQ8IZD2 1858 aa8.69□□□□□ -1.02
CDKL5-209ENST00000635828 ILVBLA1L0T0 632 aa8.69□□□□□ -1.02
CDKL5-209ENST00000635828 ITIH2P19823 946 aa8.69□□□□□ -1.02
CDKL5-209ENST00000635828 GARSP41250 739 aaKnown RBP8.69□□□□□ -1.02
CDKL5-209ENST00000635828 PAFAH1B3Q15102 231 aaKnown RBP8.69□□□□□ -1.02
CDKL5-209ENST00000635828 CYTH1Q15438 398 aa8.69□□□□□ -1.02
CDKL5-209ENST00000635828 DLG2Q15700 870 aa8.69□□□□□ -1.02
CDKL5-209ENST00000635828 IFI16Q16666 785 aaKnown RBP8.69□□□□□ -1.02
CDKL5-209ENST00000635828 FNDC3BQ53EP0 1204 aaKnown RBP8.69□□□□□ -1.02
CDKL5-209ENST00000635828 HEATR6Q6AI08 1181 aaKnown RBP8.69□□□□□ -1.02
CDKL5-209ENST00000635828 KDELC2Q7Z4H8 507 aa8.69□□□□□ -1.02
CDKL5-209ENST00000635828 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.69□□□□□ -1.02
CDKL5-209ENST00000635828 RLN3Q8WXF3 142 aa8.69□□□□□ -1.02
CDKL5-209ENST00000635828 OLFM3Q96PB7 478 aa8.69□□□□□ -1.02
CDKL5-209ENST00000635828 MAK16Q9BXY0 300 aaKnown RBP8.69□□□□□ -1.02
CDKL5-209ENST00000635828 BRD8Q9H0E9 1235 aa8.69□□□□□ -1.02
CDKL5-209ENST00000635828 DDX56Q9NY93 547 aaKnown RBP8.69□□□□□ -1.02
CDKL5-209ENST00000635828 SERGEFQ9UGK8 458 aa8.69□□□□□ -1.02
CDKL5-209ENST00000635828 IPO11Q9UI26 975 aaKnown RBP8.69□□□□□ -1.02
CDKL5-209ENST00000635828 GOLGA8CPA6NN73 597 aa8.69□□□□□ -1.02
CDKL5-209ENST00000635828 DLL1O00548 723 aa8.69□□□□□ -1.02
CDKL5-209ENST00000635828 FGF10O15520 208 aaPredicted RBP8.69□□□□□ -1.02
CDKL5-209ENST00000635828 SIN3BO75182 1162 aa8.69□□□□□ -1.02
CDKL5-209ENST00000635828 PRKCGP05129 697 aa8.69□□□□□ -1.02
CDKL5-209ENST00000635828 DLDP09622 509 aaKnown RBP8.69□□□□□ -1.02
CDKL5-209ENST00000635828 ZSCAN5DPP0CG00 497 aa8.69□□□□□ -1.02
CDKL5-209ENST00000635828 RBL1P28749 1068 aa8.69□□□□□ -1.02
CDKL5-209ENST00000635828 HCAR3P49019 387 aa8.69□□□□□ -1.02
CDKL5-209ENST00000635828 AMPD2Q01433 879 aa8.69□□□□□ -1.02
CDKL5-209ENST00000635828 PRKCQQ04759 706 aa8.69□□□□□ -1.02
CDKL5-209ENST00000635828 SERPINA13PQ6UXR4 307 aa8.69□□□□□ -1.02
CDKL5-209ENST00000635828 SH2D3CQ8N5H7 860 aa8.69□□□□□ -1.02
CDKL5-209ENST00000635828 UBL4BQ8N7F7 174 aa8.69□□□□□ -1.02
CDKL5-209ENST00000635828 CNTD1Q8N815 330 aa8.69□□□□□ -1.02
CDKL5-209ENST00000635828 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.69□□□□□ -1.02
CDKL5-209ENST00000635828 LRRN4CLQ8ND94 238 aa8.69□□□□□ -1.02
CDKL5-209ENST00000635828 TTC17Q96AE7 1141 aa8.69□□□□□ -1.02
CDKL5-209ENST00000635828 UBP1Q9NZI7 540 aa8.69□□□□□ -1.02
CDKL5-209ENST00000635828 SNX12Q9UMY4 172 aa8.69□□□□□ -1.02
CDKL5-209ENST00000635828 MUC6Q6W4X9 2439 aa8.69□□□□□ -1.02
CDKL5-209ENST00000635828 TMCC1O94876 653 aa8.69□□□□□ -1.02
CDKL5-209ENST00000635828 TTC39BQ5VTQ0 682 aaPredicted RBP8.69□□□□□ -1.02
CDKL5-209ENST00000635828 TTC27Q6P3X3 843 aa8.69□□□□□ -1.02
CDKL5-209ENST00000635828 CREG2Q8IUH2 290 aa8.69□□□□□ -1.02
CDKL5-209ENST00000635828 MAP7D3Q8IWC1 876 aa8.69□□□□□ -1.02
CDKL5-209ENST00000635828 GRIN3AQ8TCU5 1115 aa8.69□□□□□ -1.02
CDKL5-209ENST00000635828 KCND1Q9NSA2 647 aa8.69□□□□□ -1.02
CDKL5-209ENST00000635828 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.69□□□□□ -1.02
CDKL5-209ENST00000635828 CACNA1HO95180 2353 aa8.69□□□□□ -1.02
CDKL5-209ENST00000635828 KDELR3O43731 214 aa8.68□□□□□ -1.02
CDKL5-209ENST00000635828 PIGNO95427 931 aa8.68□□□□□ -1.02
CDKL5-209ENST00000635828 DRD1P21728 446 aa8.68□□□□□ -1.02
CDKL5-209ENST00000635828 EIF2DP41214 584 aaKnown RBP8.68□□□□□ -1.02
CDKL5-209ENST00000635828 MAPKAPK2P49137 400 aa8.68□□□□□ -1.02
CDKL5-209ENST00000635828 OXCT1P55809 520 aa8.68□□□□□ -1.02
CDKL5-209ENST00000635828 MTM1Q13496 603 aa8.68□□□□□ -1.02
CDKL5-209ENST00000635828 ANO7Q6IWH7 933 aa8.68□□□□□ -1.02
CDKL5-209ENST00000635828 KDM7AQ6ZMT4 941 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms