RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 ZNF124Q15973 351 aa4.99□□□□□ -1.61
SDCBP-213ENST00000630925 KCNA10Q16322 511 aa4.99□□□□□ -1.61
SDCBP-213ENST00000630925 KIZQ2M2Z5 673 aa4.99□□□□□ -1.61
SDCBP-213ENST00000630925 TRIM71Q2Q1W2 868 aaKnown RBP4.99□□□□□ -1.61
SDCBP-213ENST00000630925 NRN1LQ496H8 165 aa4.99□□□□□ -1.61
SDCBP-213ENST00000630925 SLC9B1Q4ZJI4 515 aa4.99□□□□□ -1.61
SDCBP-213ENST00000630925 ZBTB41Q5SVQ8 909 aa4.99□□□□□ -1.61
SDCBP-213ENST00000630925 RNASEH2BQ5TBB1 312 aaKnown RBP4.99□□□□□ -1.61
SDCBP-213ENST00000630925 ATL3Q6DD88 541 aa4.99□□□□□ -1.61
SDCBP-213ENST00000630925 AFTPHQ6ULP2 937 aa4.99□□□□□ -1.61
SDCBP-213ENST00000630925 KIAA0408Q6ZU52 694 aa4.99□□□□□ -1.61
SDCBP-213ENST00000630925 ERN2Q76MJ5 926 aaKnown RBP4.99□□□□□ -1.61
SDCBP-213ENST00000630925 HEATR3Q7Z4Q2 680 aa4.99□□□□□ -1.61
SDCBP-213ENST00000630925 VN1R5Q7Z5H4 357 aa4.99□□□□□ -1.61
SDCBP-213ENST00000630925 TMCO2Q7Z6W1 182 aaPredicted RBP4.99□□□□□ -1.61
SDCBP-213ENST00000630925 ZDHHC17Q8IUH5 632 aa4.99□□□□□ -1.61
SDCBP-213ENST00000630925 LYSMD2Q8IV50 215 aa4.99□□□□□ -1.61
SDCBP-213ENST00000630925 ZZZ3Q8IYH5 903 aa4.99□□□□□ -1.61
SDCBP-213ENST00000630925 OR52E1Q8NGJ3 308 aa4.99□□□□□ -1.61
SDCBP-213ENST00000630925 CDC26Q8NHZ8 85 aa4.99□□□□□ -1.61
SDCBP-213ENST00000630925 MYCBPAPQ8TBZ2 947 aa4.99□□□□□ -1.61
SDCBP-213ENST00000630925 BCL7CQ8WUZ0 217 aaPredicted RBP4.99□□□□□ -1.61
SDCBP-213ENST00000630925 SEMA3CQ99985 751 aa4.99□□□□□ -1.61
SDCBP-213ENST00000630925 TRIM54Q9BYV2 358 aa4.99□□□□□ -1.61
SDCBP-213ENST00000630925 DPH1Q9BZG8 443 aa4.99□□□□□ -1.61
SDCBP-213ENST00000630925 WDR11Q9BZH6 1224 aa4.99□□□□□ -1.61
SDCBP-213ENST00000630925 MKRN2Q9H000 416 aaKnown RBP4.99□□□□□ -1.61
SDCBP-213ENST00000630925 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.99□□□□□ -1.61
SDCBP-213ENST00000630925 ADNPQ9H2P0 1102 aa4.99□□□□□ -1.61
SDCBP-213ENST00000630925 LRRC40Q9H9A6 602 aa4.99□□□□□ -1.61
SDCBP-213ENST00000630925 SMURF2Q9HAU4 748 aa4.99□□□□□ -1.61
SDCBP-213ENST00000630925 KLC4Q9NSK0 619 aa4.99□□□□□ -1.61
SDCBP-213ENST00000630925 TBC1D23Q9NUY8 699 aa4.99□□□□□ -1.61
SDCBP-213ENST00000630925 P4HTMQ9NXG6 502 aa4.99□□□□□ -1.61
SDCBP-213ENST00000630925 ASH2LQ9UBL3 628 aa4.99□□□□□ -1.61
SDCBP-213ENST00000630925 CROTQ9UKG9 612 aa4.99□□□□□ -1.61
SDCBP-213ENST00000630925 PADI1Q9ULC6 663 aa4.99□□□□□ -1.61
SDCBP-213ENST00000630925 SNX6Q9UNH7 406 aa4.99□□□□□ -1.61
SDCBP-213ENST00000630925 RUVBL1Q9Y265 456 aaKnown RBP4.99□□□□□ -1.61
SDCBP-213ENST00000630925 KCNE2Q9Y6J6 123 aa4.99□□□□□ -1.61
SDCBP-213ENST00000630925 ASXL1Q8IXJ9 1541 aa4.99□□□□□ -1.61
SDCBP-213ENST00000630925 PLEKHG2Q9H7P9 1386 aa4.99□□□□□ -1.61
SDCBP-213ENST00000630925 C15orf38-AP3S2A0A0A6YYH1 394 aa4.98□□□□□ -1.61
SDCBP-213ENST00000630925 TRBC2A0A5B9 178 aa4.98□□□□□ -1.61
SDCBP-213ENST00000630925 ZNF716A6NP11 495 aa4.98□□□□□ -1.61
SDCBP-213ENST00000630925 MYO1GB0I1T2 1018 aa4.98□□□□□ -1.61
SDCBP-213ENST00000630925 H0Y858 1186 aa4.98□□□□□ -1.61
SDCBP-213ENST00000630925 PCDH17O14917 1159 aa4.98□□□□□ -1.61
SDCBP-213ENST00000630925 KCNQ3O43525 872 aa4.98□□□□□ -1.61
SDCBP-213ENST00000630925 ACSL4O60488 711 aa4.98□□□□□ -1.61
SDCBP-213ENST00000630925 CBR3O75828 277 aa4.98□□□□□ -1.61
SDCBP-213ENST00000630925 KLKB1P03952 638 aa4.98□□□□□ -1.61
SDCBP-213ENST00000630925 NTRK1P04629 796 aa4.98□□□□□ -1.61
SDCBP-213ENST00000630925 ASNSP08243 561 aa4.98□□□□□ -1.61
SDCBP-213ENST00000630925 FAM86B2P0C5J1 330 aa4.98□□□□□ -1.61
SDCBP-213ENST00000630925 ZNF735P0CB33 412 aa4.98□□□□□ -1.61
SDCBP-213ENST00000630925 UROSP10746 265 aa4.98□□□□□ -1.61
SDCBP-213ENST00000630925 HSPA8P11142 646 aaKnown RBP4.98□□□□□ -1.61
SDCBP-213ENST00000630925 MCM3P25205 808 aa4.98□□□□□ -1.61
SDCBP-213ENST00000630925 PTPN6P29350 595 aa4.98□□□□□ -1.61
SDCBP-213ENST00000630925 MAPKAPK2P49137 400 aa4.98□□□□□ -1.61
SDCBP-213ENST00000630925 CLCNKBP51801 687 aa4.98□□□□□ -1.61
SDCBP-213ENST00000630925 JAM2P57087 298 aa4.98□□□□□ -1.61
SDCBP-213ENST00000630925 ADAM17P78536 824 aa4.98□□□□□ -1.61
SDCBP-213ENST00000630925 TUSC3Q13454 348 aa4.98□□□□□ -1.61
SDCBP-213ENST00000630925 TDGQ13569 410 aa4.98□□□□□ -1.61
SDCBP-213ENST00000630925 SMTNL2Q2TAL5 461 aa4.98□□□□□ -1.61
SDCBP-213ENST00000630925 LRRC23Q53EV4 343 aaPredicted RBP4.98□□□□□ -1.61
SDCBP-213ENST00000630925 HERC4Q5GLZ8 1057 aaPredicted RBP4.98□□□□□ -1.61
SDCBP-213ENST00000630925 COLEC12Q5KU26 742 aa4.98□□□□□ -1.61
SDCBP-213ENST00000630925 ATAD3BQ5T9A4 648 aa4.98□□□□□ -1.61
SDCBP-213ENST00000630925 NCEH1Q6PIU2 408 aa4.98□□□□□ -1.61
SDCBP-213ENST00000630925 KDM7AQ6ZMT4 941 aa4.98□□□□□ -1.61
SDCBP-213ENST00000630925 RBPMS2Q6ZRY4 209 aaKnown RBP4.98□□□□□ -1.61
SDCBP-213ENST00000630925 CHST9Q7L1S5 443 aa4.98□□□□□ -1.61
SDCBP-213ENST00000630925 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.98□□□□□ -1.61
SDCBP-213ENST00000630925 TCAIMQ8N3R3 496 aa4.98□□□□□ -1.61
SDCBP-213ENST00000630925 DNAAF3Q8N9W5 541 aa4.98□□□□□ -1.61
SDCBP-213ENST00000630925 OR2I1PQ8NGU4 316 aa4.98□□□□□ -1.61
SDCBP-213ENST00000630925 AKR7LQ8NHP1 331 aa4.98□□□□□ -1.61
SDCBP-213ENST00000630925 CLHC1Q8NHS4 586 aa4.98□□□□□ -1.61
SDCBP-213ENST00000630925 POC1BQ8TC44 478 aa4.98□□□□□ -1.61
SDCBP-213ENST00000630925 SLC22A8Q8TCC7 542 aa4.98□□□□□ -1.61
SDCBP-213ENST00000630925 LIPHQ8WWY8 451 aa4.98□□□□□ -1.61
SDCBP-213ENST00000630925 ARHGAP45Q92619 1136 aa4.98□□□□□ -1.61
SDCBP-213ENST00000630925 PGM2Q96G03 612 aa4.98□□□□□ -1.61
SDCBP-213ENST00000630925 SNX27Q96L92 541 aa4.98□□□□□ -1.61
SDCBP-213ENST00000630925 DGAT2Q96PD7 388 aa4.98□□□□□ -1.61
SDCBP-213ENST00000630925 INTS14Q96SY0 518 aa4.98□□□□□ -1.61
SDCBP-213ENST00000630925 SECISBP2Q96T21 854 aaKnown RBP4.98□□□□□ -1.61
SDCBP-213ENST00000630925 PIP5K1AQ99755 562 aa4.98□□□□□ -1.61
SDCBP-213ENST00000630925 COQ7Q99807 217 aa4.98□□□□□ -1.61
SDCBP-213ENST00000630925 HTATIP2Q9BUP3 242 aa4.98□□□□□ -1.61
SDCBP-213ENST00000630925 FAM212BQ9NTI7 297 aaPredicted RBP4.98□□□□□ -1.61
SDCBP-213ENST00000630925 CATSPERZQ9NTU4 200 aa4.98□□□□□ -1.61
SDCBP-213ENST00000630925 TMEM140Q9NV12 185 aa4.98□□□□□ -1.61
SDCBP-213ENST00000630925 NUDT15Q9NV35 164 aa4.98□□□□□ -1.61
SDCBP-213ENST00000630925 PNPOQ9NVS9 261 aa4.98□□□□□ -1.61
SDCBP-213ENST00000630925 TUBA8Q9NY65 449 aaPredicted RBP4.98□□□□□ -1.61
SDCBP-213ENST00000630925 CD300AQ9UGN4 299 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms