RNA–Protein interactions for RNA: ENST00000625245.2

SMN1-211, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN1, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-211ENST00000625245 CCDC114Q96M63 670 aa19.44■□□□□ 0.7
SMN1-211ENST00000625245 C2orf49Q9BVC5 232 aaPredicted RBP19.44■□□□□ 0.7
SMN1-211ENST00000625245 TKTL2Q9H0I9 626 aa19.44■□□□□ 0.7
SMN1-211ENST00000625245 WDCPQ9H6R7 721 aa19.44■□□□□ 0.7
SMN1-211ENST00000625245 FZD3Q9NPG1 666 aa19.44■□□□□ 0.7
SMN1-211ENST00000625245 PLCB1Q9NQ66 1216 aa19.44■□□□□ 0.7
SMN1-211ENST00000625245 DYRK4Q9NR20 520 aa19.44■□□□□ 0.7
SMN1-211ENST00000625245 PIGVQ9NUD9 493 aa19.44■□□□□ 0.7
SMN1-211ENST00000625245 SNX10Q9Y5X0 201 aa19.44■□□□□ 0.7
SMN1-211ENST00000625245 TRPM6Q9BX84 2022 aa19.43■□□□□ 0.7
SMN1-211ENST00000625245 PCDH8O95206 1070 aa19.43■□□□□ 0.7
SMN1-211ENST00000625245 RRM1P23921 792 aa19.43■□□□□ 0.7
SMN1-211ENST00000625245 ACP1P24666 158 aa19.43■□□□□ 0.7
SMN1-211ENST00000625245 PON1P27169 355 aa19.43■□□□□ 0.7
SMN1-211ENST00000625245 SULT1E1P49888 294 aa19.43■□□□□ 0.7
SMN1-211ENST00000625245 INSM1Q01101 510 aaPredicted RBP19.43■□□□□ 0.7
SMN1-211ENST00000625245 ZNF211Q13398 564 aaPredicted RBP19.43■□□□□ 0.7
SMN1-211ENST00000625245 C5orf22Q49AR2 442 aa19.43■□□□□ 0.7
SMN1-211ENST00000625245 PTPN20Q4JDL3 420 aa19.43■□□□□ 0.7
SMN1-211ENST00000625245 SLC26A9Q7LBE3 791 aa19.43■□□□□ 0.7
SMN1-211ENST00000625245 BAP1Q92560 729 aa19.43■□□□□ 0.7
SMN1-211ENST00000625245 ARRDC3Q96B67 414 aa19.43■□□□□ 0.7
SMN1-211ENST00000625245 UBL7Q96S82 380 aaPredicted RBP19.43■□□□□ 0.7
SMN1-211ENST00000625245 PSMB7Q99436 277 aa19.43■□□□□ 0.7
SMN1-211ENST00000625245 CALN1Q9BXU9 219 aa19.43■□□□□ 0.7
SMN1-211ENST00000625245 PDCL3Q9H2J4 239 aa19.43■□□□□ 0.7
SMN1-211ENST00000625245 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.43■□□□□ 0.7
SMN1-211ENST00000625245 VPS51Q9UID3 782 aa19.43■□□□□ 0.7
SMN1-211ENST00000625245 RWDD2AQ9UIY3 292 aa19.43■□□□□ 0.7
SMN1-211ENST00000625245 AJAP1Q9UKB5 411 aaPredicted RBP19.43■□□□□ 0.7
SMN1-211ENST00000625245 HS3ST2Q9Y278 367 aa19.43■□□□□ 0.7
SMN1-211ENST00000625245 RAI2Q9Y5P3 530 aa19.43■□□□□ 0.7
SMN1-211ENST00000625245 FAM170AA1A519 330 aa19.42■□□□□ 0.7
SMN1-211ENST00000625245 FOXN3O00409 490 aaPredicted RBP19.42■□□□□ 0.7
SMN1-211ENST00000625245 FFAR2O15552 330 aa19.42■□□□□ 0.7
SMN1-211ENST00000625245 SMAD6O43541 496 aaKnown RBP19.42■□□□□ 0.7
SMN1-211ENST00000625245 BRINP1O60477 761 aa19.42■□□□□ 0.7
SMN1-211ENST00000625245 ENDOD1O94919 500 aa19.42■□□□□ 0.7
SMN1-211ENST00000625245 TFE3P19532 575 aaPredicted RBP19.42■□□□□ 0.7
SMN1-211ENST00000625245 DGKAP23743 735 aa19.42■□□□□ 0.7
SMN1-211ENST00000625245 AKT2P31751 481 aa19.42■□□□□ 0.7
SMN1-211ENST00000625245 MTIF2P46199 727 aaKnown RBP19.42■□□□□ 0.7
SMN1-211ENST00000625245 E2F1Q01094 437 aa19.42■□□□□ 0.7
SMN1-211ENST00000625245 KCNMA1Q12791 1236 aa19.42■□□□□ 0.7
SMN1-211ENST00000625245 NEK5Q6P3R8 708 aa19.42■□□□□ 0.7
SMN1-211ENST00000625245 LRRC31Q6UY01 552 aa19.42■□□□□ 0.7
SMN1-211ENST00000625245 LINGO4Q6UY18 593 aa19.42■□□□□ 0.7
SMN1-211ENST00000625245 KDM7AQ6ZMT4 941 aa19.42■□□□□ 0.7
SMN1-211ENST00000625245 TMC6Q7Z403 805 aa19.42■□□□□ 0.7
SMN1-211ENST00000625245 TFAP2DQ7Z6R9 452 aa19.42■□□□□ 0.7
SMN1-211ENST00000625245 SLC47A2Q86VL8 602 aa19.42■□□□□ 0.7
SMN1-211ENST00000625245 HORMAD1Q86X24 394 aa19.42■□□□□ 0.7
SMN1-211ENST00000625245 TMEM145Q8NBT3 493 aa19.42■□□□□ 0.7
SMN1-211ENST00000625245 CHST14Q8NCH0 376 aa19.42■□□□□ 0.7
SMN1-211ENST00000625245 TMIEQ8NEW7 156 aa19.42■□□□□ 0.7
SMN1-211ENST00000625245 OR2A12Q8NGT7 310 aa19.42■□□□□ 0.7
SMN1-211ENST00000625245 NPY6RQ99463 290 aa19.42■□□□□ 0.7
SMN1-211ENST00000625245 ANLNQ9NQW6 1124 aa19.42■□□□□ 0.7
SMN1-211ENST00000625245 KLHL11Q9NVR0 708 aa19.42■□□□□ 0.7
SMN1-211ENST00000625245 UCKL1Q9NWZ5 548 aa19.42■□□□□ 0.7
SMN1-211ENST00000625245 DNAJC12Q9UKB3 198 aa19.42■□□□□ 0.7
SMN1-211ENST00000625245 BPTFQ12830 3046 aa19.41■□□□□ 0.7
SMN1-211ENST00000625245 SMG1Q96Q15 3661 aaKnown RBP19.41■□□□□ 0.7
SMN1-211ENST00000625245 A0A0D9SEW6 157 aa19.41■□□□□ 0.7
SMN1-211ENST00000625245 MT-CO3P00414 261 aa19.41■□□□□ 0.7
SMN1-211ENST00000625245 PRNPP04156 253 aa19.41■□□□□ 0.7
SMN1-211ENST00000625245 PRB1P04280 392 aa19.41■□□□□ 0.7
SMN1-211ENST00000625245 PNMA6AP0CW24 399 aaPredicted RBP19.41■□□□□ 0.7
SMN1-211ENST00000625245 CLCN1P35523 988 aa19.41■□□□□ 0.7
SMN1-211ENST00000625245 RECQLP46063 649 aaPredicted RBP19.41■□□□□ 0.7
SMN1-211ENST00000625245 CXCR3P49682 368 aa19.41■□□□□ 0.7
SMN1-211ENST00000625245 CLDN2P57739 230 aa19.41■□□□□ 0.7
SMN1-211ENST00000625245 DEUP1Q05D60 604 aa19.41■□□□□ 0.7
SMN1-211ENST00000625245 ZNF284Q2VY69 593 aa19.41■□□□□ 0.7
SMN1-211ENST00000625245 ARSIQ5FYB1 569 aa19.41■□□□□ 0.7
SMN1-211ENST00000625245 BRMS1LQ5PSV4 323 aa19.41■□□□□ 0.7
SMN1-211ENST00000625245 OTUD1Q5VV17 481 aaPredicted RBP19.41■□□□□ 0.7
SMN1-211ENST00000625245 ZNF397Q8NF99 534 aaPredicted RBP19.41■□□□□ 0.7
SMN1-211ENST00000625245 OR13H1Q8NG92 308 aa19.41■□□□□ 0.7
SMN1-211ENST00000625245 GRIN3AQ8TCU5 1115 aa19.41■□□□□ 0.7
SMN1-211ENST00000625245 RFFLQ8WZ73 363 aa19.41■□□□□ 0.7
SMN1-211ENST00000625245 FGF11Q92914 225 aa19.41■□□□□ 0.7
SMN1-211ENST00000625245 SPON2Q9BUD6 331 aa19.41■□□□□ 0.7
SMN1-211ENST00000625245 TNKS2Q9H2K2 1166 aa19.41■□□□□ 0.7
SMN1-211ENST00000625245 CAAP1Q9H8G2 361 aa19.41■□□□□ 0.7
SMN1-211ENST00000625245 ARHGEF38Q9NXL2 777 aa19.41■□□□□ 0.7
SMN1-211ENST00000625245 RRN3Q9NYV6 651 aa19.41■□□□□ 0.7
SMN1-211ENST00000625245 MPP6Q9NZW5 540 aa19.41■□□□□ 0.7
SMN1-211ENST00000625245 STAP1Q9ULZ2 295 aa19.41■□□□□ 0.7
SMN1-211ENST00000625245 PTPRQQ9UMZ3 2332 aa19.4■□□□□ 0.7
SMN1-211ENST00000625245 GTPBP10A4D1E9 387 aaKnown RBP19.4■□□□□ 0.7
SMN1-211ENST00000625245 RNF103O00237 685 aa19.4■□□□□ 0.7
SMN1-211ENST00000625245 HNRNPA2B1P22626 353 aaKnown RBP19.4■□□□□ 0.7
SMN1-211ENST00000625245 ACTN2P35609 894 aa19.4■□□□□ 0.7
SMN1-211ENST00000625245 CAMK4Q16566 473 aa19.4■□□□□ 0.7
SMN1-211ENST00000625245 ERN2Q76MJ5 926 aaKnown RBP19.4■□□□□ 0.7
SMN1-211ENST00000625245 SETD3Q86TU7 594 aaPredicted RBP19.4■□□□□ 0.7
SMN1-211ENST00000625245 ZDHHC17Q8IUH5 632 aa19.4■□□□□ 0.7
SMN1-211ENST00000625245 CACTIN-AS1Q8N1I8 211 aa19.4■□□□□ 0.7
SMN1-211ENST00000625245 DCBLD1Q8N8Z6 715 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 765.4 ms