RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 CFIP05156 583 aa12.73□□□□□ -0.37
LINC00963-217ENST00000624009 ZNF883P0CG24 379 aa12.73□□□□□ -0.37
LINC00963-217ENST00000624009 SRCP12931 536 aa12.73□□□□□ -0.37
LINC00963-217ENST00000624009 CD27P26842 260 aa12.73□□□□□ -0.37
LINC00963-217ENST00000624009 SLC8A1P32418 973 aa12.73□□□□□ -0.37
LINC00963-217ENST00000624009 CCR5P51681 352 aa12.73□□□□□ -0.37
LINC00963-217ENST00000624009 AFF3P51826 1226 aaKnown RBP12.73□□□□□ -0.37
LINC00963-217ENST00000624009 YBEYP58557 167 aaPredicted RBP12.73□□□□□ -0.37
LINC00963-217ENST00000624009 SEMA3BQ13214 749 aa12.73□□□□□ -0.37
LINC00963-217ENST00000624009 STK40Q8N2I9 435 aa12.73□□□□□ -0.37
LINC00963-217ENST00000624009 PCDH20Q8N6Y1 951 aaKnown RBP12.73□□□□□ -0.37
LINC00963-217ENST00000624009 CCDC185Q8N715 623 aa12.73□□□□□ -0.37
LINC00963-217ENST00000624009 RTL3Q8N8U3 475 aaKnown RBP12.73□□□□□ -0.37
LINC00963-217ENST00000624009 OR2T34Q8NGX1 318 aa12.73□□□□□ -0.37
LINC00963-217ENST00000624009 CASKIN2Q8WXE0 1202 aa12.73□□□□□ -0.37
LINC00963-217ENST00000624009 OMDQ99983 421 aa12.73□□□□□ -0.37
LINC00963-217ENST00000624009 CATSPERBQ9H7T0 1116 aa12.73□□□□□ -0.37
LINC00963-217ENST00000624009 DNAAF2Q9NVR5 837 aaKnown RBP12.73□□□□□ -0.37
LINC00963-217ENST00000624009 FZD10Q9ULW2 581 aa12.73□□□□□ -0.37
LINC00963-217ENST00000624009 SNX10Q9Y5X0 201 aa12.73□□□□□ -0.37
LINC00963-217ENST00000624009 PLXNA2O75051 1894 aa12.73□□□□□ -0.37
LINC00963-217ENST00000624009 TMEM131Q92545 1883 aa12.72□□□□□ -0.37
LINC00963-217ENST00000624009 ATXN2Q99700 1313 aaKnown RBP12.72□□□□□ -0.37
LINC00963-217ENST00000624009 RNF8O76064 485 aa12.72□□□□□ -0.37
LINC00963-217ENST00000624009 GJB6O95452 261 aa12.72□□□□□ -0.37
LINC00963-217ENST00000624009 PRNPP04156 253 aa12.72□□□□□ -0.37
LINC00963-217ENST00000624009 GYPCP04921 128 aa12.72□□□□□ -0.37
LINC00963-217ENST00000624009 PCK1P35558 622 aa12.72□□□□□ -0.37
LINC00963-217ENST00000624009 GRIA4P48058 902 aa12.72□□□□□ -0.37
LINC00963-217ENST00000624009 SERPINH1P50454 418 aaKnown RBP12.72□□□□□ -0.37
LINC00963-217ENST00000624009 ATXN3P54252 364 aaPredicted RBP12.72□□□□□ -0.37
LINC00963-217ENST00000624009 GALCP54803 685 aa12.72□□□□□ -0.37
LINC00963-217ENST00000624009 HNRNPDQ14103 355 aaKnown RBP12.72□□□□□ -0.37
LINC00963-217ENST00000624009 ACCSLQ4AC99 568 aa12.72□□□□□ -0.37
LINC00963-217ENST00000624009 RAB6CQ53S08 254 aa12.72□□□□□ -0.37
LINC00963-217ENST00000624009 KIAA0895LQ68EN5 471 aa12.72□□□□□ -0.37
LINC00963-217ENST00000624009 RWDD4Q6NW29 188 aaKnown RBP12.72□□□□□ -0.37
LINC00963-217ENST00000624009 PHLDB2Q86SQ0 1253 aa12.72□□□□□ -0.37
LINC00963-217ENST00000624009 CACUL1Q86Y37 369 aa12.72□□□□□ -0.37
LINC00963-217ENST00000624009 UMODL1-AS1Q8N2C9 162 aa12.72□□□□□ -0.37
LINC00963-217ENST00000624009 DEFB119Q8N690 84 aa12.72□□□□□ -0.37
LINC00963-217ENST00000624009 ATP11CQ8NB49 1132 aa12.72□□□□□ -0.37
LINC00963-217ENST00000624009 LRIG1Q96JA1 1093 aa12.72□□□□□ -0.37
LINC00963-217ENST00000624009 RAB6CQ9H0N0 254 aa12.72□□□□□ -0.37
LINC00963-217ENST00000624009 NEUROG2Q9H2A3 272 aa12.72□□□□□ -0.37
LINC00963-217ENST00000624009 MTG2Q9H4K7 406 aa12.72□□□□□ -0.37
LINC00963-217ENST00000624009 C6orf106Q9H6K1 298 aaPredicted RBP12.72□□□□□ -0.37
LINC00963-217ENST00000624009 ATP13A1Q9HD20 1204 aa12.72□□□□□ -0.37
LINC00963-217ENST00000624009 IFNKQ9P0W0 207 aa12.72□□□□□ -0.37
LINC00963-217ENST00000624009 CNOT8Q9UFF9 292 aaKnown RBP12.72□□□□□ -0.37
LINC00963-217ENST00000624009 HPCAL4Q9UM19 191 aa12.72□□□□□ -0.37
LINC00963-217ENST00000624009 A0A1W2PP55 124 aa12.71□□□□□ -0.37
LINC00963-217ENST00000624009 A0A1W2PPC4 97 aa12.71□□□□□ -0.37
LINC00963-217ENST00000624009 DCDC2BA2VCK2 349 aa12.71□□□□□ -0.37
LINC00963-217ENST00000624009 FAM72CH0Y354 149 aa12.71□□□□□ -0.37
LINC00963-217ENST00000624009 CBX4O00257 560 aa12.71□□□□□ -0.37
LINC00963-217ENST00000624009 LATO43561 262 aa12.71□□□□□ -0.37
LINC00963-217ENST00000624009 PLRG1O43660 514 aaKnown RBP12.71□□□□□ -0.37
LINC00963-217ENST00000624009 SNAP91O60641 907 aa12.71□□□□□ -0.37
LINC00963-217ENST00000624009 OPHN1O60890 802 aa12.71□□□□□ -0.37
LINC00963-217ENST00000624009 RAMP2O60895 175 aa12.71□□□□□ -0.37
LINC00963-217ENST00000624009 GJB3O75712 270 aa12.71□□□□□ -0.37
LINC00963-217ENST00000624009 RNASEH2AO75792 299 aaKnown RBP12.71□□□□□ -0.37
LINC00963-217ENST00000624009 MT-CO1P00395 513 aa12.71□□□□□ -0.37
LINC00963-217ENST00000624009 IL1BP01584 269 aa12.71□□□□□ -0.37
LINC00963-217ENST00000624009 CEACAM1P13688 526 aa12.71□□□□□ -0.37
LINC00963-217ENST00000624009 PSMA2P25787 234 aa12.71□□□□□ -0.37
LINC00963-217ENST00000624009 DRD3P35462 400 aa12.71□□□□□ -0.37
LINC00963-217ENST00000624009 RECQLP46063 649 aaPredicted RBP12.71□□□□□ -0.37
LINC00963-217ENST00000624009 PSMD8P48556 350 aa12.71□□□□□ -0.37
LINC00963-217ENST00000624009 ADPRHP54922 357 aa12.71□□□□□ -0.37
LINC00963-217ENST00000624009 RACK1P63244 317 aaKnown RBP12.71□□□□□ -0.37
LINC00963-217ENST00000624009 OGDHQ02218 1023 aa12.71□□□□□ -0.37
LINC00963-217ENST00000624009 TEAD4Q15561 434 aa12.71□□□□□ -0.37
LINC00963-217ENST00000624009 PARP15Q460N3 678 aa12.71□□□□□ -0.37
LINC00963-217ENST00000624009 INO80DQ53TQ3 878 aaPredicted RBP12.71□□□□□ -0.37
LINC00963-217ENST00000624009 TDRD12Q587J7 1177 aaKnown RBP12.71□□□□□ -0.37
LINC00963-217ENST00000624009 PPM1JQ5JR12 505 aa12.71□□□□□ -0.37
LINC00963-217ENST00000624009 ERMARDQ5T6L9 678 aa12.71□□□□□ -0.37
LINC00963-217ENST00000624009 FAM72AQ5TYM5 149 aa12.71□□□□□ -0.37
LINC00963-217ENST00000624009 SPECC1LQ69YQ0 1117 aa12.71□□□□□ -0.37
LINC00963-217ENST00000624009 FAM72DQ6L9T8 149 aa12.71□□□□□ -0.37
LINC00963-217ENST00000624009 NEK5Q6P3R8 708 aa12.71□□□□□ -0.37
LINC00963-217ENST00000624009 C22orf39Q6P5X5 142 aa12.71□□□□□ -0.37
LINC00963-217ENST00000624009 Q6ZVU0 165 aa12.71□□□□□ -0.37
LINC00963-217ENST00000624009 FAM124AQ86V42 546 aa12.71□□□□□ -0.37
LINC00963-217ENST00000624009 ZSCAN30Q86W11 494 aa12.71□□□□□ -0.37
LINC00963-217ENST00000624009 FAM72BQ86X60 149 aa12.71□□□□□ -0.37
LINC00963-217ENST00000624009 AADATQ8N5Z0 425 aa12.71□□□□□ -0.37
LINC00963-217ENST00000624009 OR2A12Q8NGT7 310 aa12.71□□□□□ -0.37
LINC00963-217ENST00000624009 GANCQ8TET4 914 aa12.71□□□□□ -0.37
LINC00963-217ENST00000624009 ARHGEF2Q92974 986 aaKnown RBP12.71□□□□□ -0.37
LINC00963-217ENST00000624009 BIRC7Q96CA5 298 aa12.71□□□□□ -0.37
LINC00963-217ENST00000624009 ZNF653Q96CK0 615 aa12.71□□□□□ -0.37
LINC00963-217ENST00000624009 PPP1R16AQ96I34 528 aa12.71□□□□□ -0.37
LINC00963-217ENST00000624009 DNAJC7Q99615 494 aa12.71□□□□□ -0.37
LINC00963-217ENST00000624009 XPO4Q9C0E2 1151 aaKnown RBP12.71□□□□□ -0.37
LINC00963-217ENST00000624009 TSPY26PQ9H489 355 aa12.71□□□□□ -0.37
LINC00963-217ENST00000624009 SERGEFQ9UGK8 458 aa12.71□□□□□ -0.37
LINC00963-217ENST00000624009 EIF2B4Q9UI10 523 aaKnown RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms