RNA–Protein interactions for RNA: ENST00000621093.4

POLR2J3-221, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene POLR2J3, Length 348 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-221ENST00000621093 SMARCAL1Q9NZC9 954 aa11.16□□□□□ -0.62
POLR2J3-221ENST00000621093 IPO11Q9UI26 975 aaKnown RBP11.16□□□□□ -0.62
POLR2J3-221ENST00000621093 SLC25A13Q9UJS0 675 aa11.16□□□□□ -0.62
POLR2J3-221ENST00000621093 R3HDM2Q9Y2K5 976 aaKnown RBP11.16□□□□□ -0.62
POLR2J3-221ENST00000621093 FCF1Q9Y324 198 aaKnown RBP11.16□□□□□ -0.62
POLR2J3-221ENST00000621093 NCAM2O15394 837 aa11.15□□□□□ -0.62
POLR2J3-221ENST00000621093 PEX11BO96011 259 aa11.15□□□□□ -0.62
POLR2J3-221ENST00000621093 SRPRAP08240 638 aaKnown RBP11.15□□□□□ -0.62
POLR2J3-221ENST00000621093 ZFXP17010 805 aaPredicted RBP11.15□□□□□ -0.62
POLR2J3-221ENST00000621093 TGM2P21980 687 aa11.15□□□□□ -0.62
POLR2J3-221ENST00000621093 MSNP26038 577 aaKnown RBP11.15□□□□□ -0.62
POLR2J3-221ENST00000621093 NTSR1P30989 418 aa11.15□□□□□ -0.62
POLR2J3-221ENST00000621093 ETFBP38117 255 aa11.15□□□□□ -0.62
POLR2J3-221ENST00000621093 CETN2P41208 172 aa11.15□□□□□ -0.62
POLR2J3-221ENST00000621093 GARSP41250 739 aaKnown RBP11.15□□□□□ -0.62
POLR2J3-221ENST00000621093 SERPINH1P50454 418 aaKnown RBP11.15□□□□□ -0.62
POLR2J3-221ENST00000621093 ETF1P62495 437 aaKnown RBP11.15□□□□□ -0.62
POLR2J3-221ENST00000621093 OTUD4Q01804 1114 aaKnown RBP11.15□□□□□ -0.62
POLR2J3-221ENST00000621093 SULT2A1Q06520 285 aa11.15□□□□□ -0.62
POLR2J3-221ENST00000621093 IL10RBQ08334 325 aa11.15□□□□□ -0.62
POLR2J3-221ENST00000621093 MTAPQ13126 283 aa11.15□□□□□ -0.62
POLR2J3-221ENST00000621093 KLF1Q13351 362 aaPredicted RBP11.15□□□□□ -0.62
POLR2J3-221ENST00000621093 ENPP2Q13822 863 aa11.15□□□□□ -0.62
POLR2J3-221ENST00000621093 CYTH1Q15438 398 aa11.15□□□□□ -0.62
POLR2J3-221ENST00000621093 ACCSLQ4AC99 568 aa11.15□□□□□ -0.62
POLR2J3-221ENST00000621093 KIAA1211LQ6NV74 962 aa11.15□□□□□ -0.62
POLR2J3-221ENST00000621093 TMEM92Q6UXU6 159 aa11.15□□□□□ -0.62
POLR2J3-221ENST00000621093 BMP8AQ7Z5Y6 402 aa11.15□□□□□ -0.62
POLR2J3-221ENST00000621093 ZC3H18Q86VM9 953 aaKnown RBP11.15□□□□□ -0.62
POLR2J3-221ENST00000621093 SYNPOQ8N3V7 929 aa11.15□□□□□ -0.62
POLR2J3-221ENST00000621093 FBXL6Q8N531 539 aa11.15□□□□□ -0.62
POLR2J3-221ENST00000621093 ATPAF2Q8N5M1 289 aa11.15□□□□□ -0.62
POLR2J3-221ENST00000621093 ATP11CQ8NB49 1132 aa11.15□□□□□ -0.62
POLR2J3-221ENST00000621093 ACTL9Q8TC94 416 aa11.15□□□□□ -0.62
POLR2J3-221ENST00000621093 FRS2Q8WU20 508 aa11.15□□□□□ -0.62
POLR2J3-221ENST00000621093 ACDQ96AP0 544 aa11.15□□□□□ -0.62
POLR2J3-221ENST00000621093 OLFM3Q96PB7 478 aa11.15□□□□□ -0.62
POLR2J3-221ENST00000621093 LGMNQ99538 433 aa11.15□□□□□ -0.62
POLR2J3-221ENST00000621093 NAPGQ99747 312 aaPredicted RBP11.15□□□□□ -0.62
POLR2J3-221ENST00000621093 TNKS2Q9H2K2 1166 aa11.15□□□□□ -0.62
POLR2J3-221ENST00000621093 CHRDQ9H2X0 955 aa11.15□□□□□ -0.62
POLR2J3-221ENST00000621093 TMEM245Q9H330 911 aa11.15□□□□□ -0.62
POLR2J3-221ENST00000621093 DONSONQ9NYP3 566 aa11.15□□□□□ -0.62
POLR2J3-221ENST00000621093 HPCAL4Q9UM19 191 aa11.15□□□□□ -0.62
POLR2J3-221ENST00000621093 SNX12Q9UMY4 172 aa11.15□□□□□ -0.62
POLR2J3-221ENST00000621093 PLA2G4CQ9UP65 541 aa11.15□□□□□ -0.62
POLR2J3-221ENST00000621093 EFR3BQ9Y2G0 817 aa11.15□□□□□ -0.62
POLR2J3-221ENST00000621093 TTC28Q96AY4 2481 aa11.15□□□□□ -0.62
POLR2J3-221ENST00000621093 TRIOO75962 3097 aa11.15□□□□□ -0.63
POLR2J3-221ENST00000621093 CHURC1-FNTBB4DL54 471 aa11.14□□□□□ -0.63
POLR2J3-221ENST00000621093 APOC4-APOC2K7ER74 178 aa11.14□□□□□ -0.63
POLR2J3-221ENST00000621093 ATP9BO43861 1147 aa11.14□□□□□ -0.63
POLR2J3-221ENST00000621093 BNIP3LO60238 219 aa11.14□□□□□ -0.63
POLR2J3-221ENST00000621093 ZNF821O75541 412 aaPredicted RBP11.14□□□□□ -0.63
POLR2J3-221ENST00000621093 TMCC1O94876 653 aa11.14□□□□□ -0.63
POLR2J3-221ENST00000621093 TJP3O95049 919 aa11.14□□□□□ -0.63
POLR2J3-221ENST00000621093 APOC2P02655 101 aa11.14□□□□□ -0.63
POLR2J3-221ENST00000621093 EPHX1P07099 455 aa11.14□□□□□ -0.63
POLR2J3-221ENST00000621093 RPS9P46781 194 aaKnown RBP11.14□□□□□ -0.63
POLR2J3-221ENST00000621093 CLCN5P51795 746 aa11.14□□□□□ -0.63
POLR2J3-221ENST00000621093 ST8SIA6P61647 398 aa11.14□□□□□ -0.63
POLR2J3-221ENST00000621093 SATB1Q01826 763 aa11.14□□□□□ -0.63
POLR2J3-221ENST00000621093 SLC10A7Q0GE19 358 aa11.14□□□□□ -0.63
POLR2J3-221ENST00000621093 NOMO1Q15155 1222 aa11.14□□□□□ -0.63
POLR2J3-221ENST00000621093 SIX1Q15475 284 aaPredicted RBP11.14□□□□□ -0.63
POLR2J3-221ENST00000621093 DLG2Q15700 870 aa11.14□□□□□ -0.63
POLR2J3-221ENST00000621093 CCDC181Q5TID7 509 aa11.14□□□□□ -0.63
POLR2J3-221ENST00000621093 PAPD7Q5XG87 772 aaKnown RBP11.14□□□□□ -0.63
POLR2J3-221ENST00000621093 RETSATQ6NUM9 610 aa11.14□□□□□ -0.63
POLR2J3-221ENST00000621093 SERPINA13PQ6UXR4 307 aa11.14□□□□□ -0.63
POLR2J3-221ENST00000621093 Q6ZVU0 165 aa11.14□□□□□ -0.63
POLR2J3-221ENST00000621093 CCNYQ8ND76 341 aa11.14□□□□□ -0.63
POLR2J3-221ENST00000621093 KCNV2Q8TDN2 545 aa11.14□□□□□ -0.63
POLR2J3-221ENST00000621093 UBE2Q2Q8WVN8 375 aa11.14□□□□□ -0.63
POLR2J3-221ENST00000621093 P3H4Q92791 437 aa11.14□□□□□ -0.63
POLR2J3-221ENST00000621093 PTPRN2Q92932 1015 aa11.14□□□□□ -0.63
POLR2J3-221ENST00000621093 HDAC11Q96DB2 347 aa11.14□□□□□ -0.63
POLR2J3-221ENST00000621093 ZNF419Q96HQ0 510 aaPredicted RBP11.14□□□□□ -0.63
POLR2J3-221ENST00000621093 GABRG3Q99928 467 aa11.14□□□□□ -0.63
POLR2J3-221ENST00000621093 SLC6A17Q9H1V8 727 aa11.14□□□□□ -0.63
POLR2J3-221ENST00000621093 PRDM16Q9HAZ2 1276 aa11.14□□□□□ -0.63
POLR2J3-221ENST00000621093 UBA2Q9UBT2 640 aaPredicted RBP11.14□□□□□ -0.63
POLR2J3-221ENST00000621093 MMP17Q9ULZ9 603 aa11.14□□□□□ -0.63
POLR2J3-221ENST00000621093 HS3ST2Q9Y278 367 aa11.14□□□□□ -0.63
POLR2J3-221ENST00000621093 A0A1W2PQF6 199 aa11.13□□□□□ -0.63
POLR2J3-221ENST00000621093 TTC24A2A3L6 582 aaPredicted RBP11.13□□□□□ -0.63
POLR2J3-221ENST00000621093 CTAGE9A4FU28 777 aa11.13□□□□□ -0.63
POLR2J3-221ENST00000621093 RNF103O00237 685 aa11.13□□□□□ -0.63
POLR2J3-221ENST00000621093 DLL1O00548 723 aa11.13□□□□□ -0.63
POLR2J3-221ENST00000621093 MUSKO15146 869 aa11.13□□□□□ -0.63
POLR2J3-221ENST00000621093 SIN3BO75182 1162 aa11.13□□□□□ -0.63
POLR2J3-221ENST00000621093 GJB3O75712 270 aa11.13□□□□□ -0.63
POLR2J3-221ENST00000621093 FGGP02679 453 aa11.13□□□□□ -0.63
POLR2J3-221ENST00000621093 HOXB2P14652 356 aa11.13□□□□□ -0.63
POLR2J3-221ENST00000621093 CCNCP24863 283 aa11.13□□□□□ -0.63
POLR2J3-221ENST00000621093 CASQ1P31415 396 aa11.13□□□□□ -0.63
POLR2J3-221ENST00000621093 RGRP47804 291 aa11.13□□□□□ -0.63
POLR2J3-221ENST00000621093 NR2C2P49116 596 aa11.13□□□□□ -0.63
POLR2J3-221ENST00000621093 NRLP54845 237 aa11.13□□□□□ -0.63
POLR2J3-221ENST00000621093 EIF3EP60228 445 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms