RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 NNMTP40261 264 aa5.11□□□□□ -1.59
VPS13D-214ENST00000620676 DPYSL3Q14195 570 aa5.11□□□□□ -1.59
VPS13D-214ENST00000620676 GPR162Q16538 588 aa5.11□□□□□ -1.59
VPS13D-214ENST00000620676 SWSAP1Q6NVH7 229 aa5.11□□□□□ -1.59
VPS13D-214ENST00000620676 ZNF544Q6NX49 715 aa5.11□□□□□ -1.59
VPS13D-214ENST00000620676 KCNK18Q7Z418 384 aa5.11□□□□□ -1.59
VPS13D-214ENST00000620676 TOR1AIP2Q8NFQ8 470 aa5.11□□□□□ -1.59
VPS13D-214ENST00000620676 OR10Q1Q8NGQ4 319 aa5.11□□□□□ -1.59
VPS13D-214ENST00000620676 SYTL5Q8TDW5 730 aaPredicted RBP5.11□□□□□ -1.59
VPS13D-214ENST00000620676 SNX27Q96L92 541 aa5.11□□□□□ -1.59
VPS13D-214ENST00000620676 EMILIN2Q9BXX0 1053 aa5.11□□□□□ -1.59
VPS13D-214ENST00000620676 MTRRQ9UBK8 725 aa5.11□□□□□ -1.59
VPS13D-214ENST00000620676 ERI2A8K979 691 aaKnown RBP5.11□□□□□ -1.59
VPS13D-214ENST00000620676 E5RI56 91 aa5.11□□□□□ -1.59
VPS13D-214ENST00000620676 ATP6V1G2-DDX39BF2Z307 99 aa5.11□□□□□ -1.59
VPS13D-214ENST00000620676 WWP2O00308 870 aa5.11□□□□□ -1.59
VPS13D-214ENST00000620676 IL7RP16871 459 aa5.11□□□□□ -1.59
VPS13D-214ENST00000620676 POLR2EP19388 210 aaKnown RBP5.11□□□□□ -1.59
VPS13D-214ENST00000620676 GAD2Q05329 585 aa5.11□□□□□ -1.59
VPS13D-214ENST00000620676 OCLNQ16625 522 aa5.11□□□□□ -1.59
VPS13D-214ENST00000620676 DPY19L2Q6NUT2 758 aa5.11□□□□□ -1.59
VPS13D-214ENST00000620676 ZNF605Q86T29 641 aa5.11□□□□□ -1.59
VPS13D-214ENST00000620676 TRIM69Q86WT6 500 aa5.11□□□□□ -1.59
VPS13D-214ENST00000620676 RXFP2Q8WXD0 754 aa5.11□□□□□ -1.59
VPS13D-214ENST00000620676 APOL4Q9BPW4 351 aa5.11□□□□□ -1.59
VPS13D-214ENST00000620676 EMC3Q9P0I2 261 aa5.11□□□□□ -1.59
VPS13D-214ENST00000620676 MBD2Q9UBB5 411 aa5.11□□□□□ -1.59
VPS13D-214ENST00000620676 NFKBIL1Q9UBC1 381 aaPredicted RBP5.11□□□□□ -1.59
VPS13D-214ENST00000620676 FSCN2O14926 492 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 MAP3K10Q02779 954 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 CD300CQ08708 224 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 ATP6AP1LQ52LC2 224 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 PLEKHO2Q8TD55 490 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 HSFY1Q96LI6 401 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 RTKNQ9BST9 563 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 FANCFQ9NPI8 374 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 TBC1D22BQ9NU19 505 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 ITGB1P05556 798 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 GPX6P59796 221 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 CYP2A13Q16696 494 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 ASPRV1Q53RT3 343 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 OR7G1Q8NGA0 311 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 CYP2W1Q8TAV3 490 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 SMG7Q92540 1137 aaKnown RBP5.1□□□□□ -1.59
VPS13D-214ENST00000620676 GLT1D1Q96MS3 346 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 MAT2BQ9NZL9 334 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 RNF112Q9ULX5 631 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 GCC2Q8IWJ2 1684 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 ICMTO60725 284 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 CKMT2P17540 419 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 AP5B1Q2VPB7 878 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 VPS26BQ4G0F5 336 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 TFDP3Q5H9I0 405 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 TMEM198Q66K66 360 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 DENND1BQ6P3S1 775 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 PROSER1Q86XN7 944 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 EPHX4Q8IUS5 362 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 SHCBP1Q8NEM2 672 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 MED28Q9H204 178 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 SNTG1Q9NSN8 517 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 HSPB11Q9Y547 144 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 MAP1BP46821 2468 aaKnown RBP5.1□□□□□ -1.59
VPS13D-214ENST00000620676 FANCAO15360 1455 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 LRIG2O94898 1065 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 ELK4P28324 431 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 SULT1E1P49888 294 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 NAGLUP54802 743 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 POU4F1Q01851 419 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 CCDC115Q96NT0 180 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 MLPHQ9BV36 600 aaPredicted RBP5.1□□□□□ -1.59
VPS13D-214ENST00000620676 TRPM5Q9NZQ8 1165 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 HUS1O60921 280 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 SLC2A4P14672 509 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 TUBA4AP68366 448 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 ACAP2Q15057 778 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 SPESP1Q6UW49 350 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 SLAIN1Q8ND83 568 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 BHMTQ93088 406 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 NACC2Q96BF6 587 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.1□□□□□ -1.59
VPS13D-214ENST00000620676 PPEF1O14829 653 aaPredicted RBP5.1□□□□□ -1.59
VPS13D-214ENST00000620676 BCKDKO14874 412 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 FARP2O94887 1054 aaPredicted RBP5.1□□□□□ -1.59
VPS13D-214ENST00000620676 CAPGP40121 348 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 STARP49675 285 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 SNX20Q7Z614 316 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 ARMC5Q96C12 935 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 KAZALD1Q96I82 304 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 KIFC1Q9BW19 673 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 AS3MTQ9HBK9 375 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 LRRC4Q9HBW1 653 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 NRBP2Q9NSY0 501 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 RBAKQ9NYW8 714 aaPredicted RBP5.1□□□□□ -1.59
VPS13D-214ENST00000620676 PAK5Q9P286 719 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 COL15A1P39059 1388 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 ILVBLA1L0T0 632 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 PDIA5Q14554 519 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 QRICH1Q2TAL8 776 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 PIWIL3Q7Z3Z3 882 aaKnown RBP5.1□□□□□ -1.59
VPS13D-214ENST00000620676 ETNPPLQ8TBG4 499 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms