RNA–Protein interactions for RNA: ENST00000620507.4

RBFOX1-223, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-223ENST00000620507 TBL3Q12788 808 aaKnown RBP9.37□□□□□ -0.91
RBFOX1-223ENST00000620507 PDAP1Q13442 181 aaKnown RBP9.37□□□□□ -0.91
RBFOX1-223ENST00000620507 TUSC3Q13454 348 aa9.37□□□□□ -0.91
RBFOX1-223ENST00000620507 INTS6LQ5JSJ4 861 aaKnown RBP9.37□□□□□ -0.91
RBFOX1-223ENST00000620507 RARS2Q5T160 578 aaKnown RBP9.37□□□□□ -0.91
RBFOX1-223ENST00000620507 NTAN1Q96AB6 310 aa9.37□□□□□ -0.91
RBFOX1-223ENST00000620507 RBBP8Q99708 897 aa9.37□□□□□ -0.91
RBFOX1-223ENST00000620507 STN1Q9H668 368 aaKnown RBP9.37□□□□□ -0.91
RBFOX1-223ENST00000620507 MRPL40Q9NQ50 206 aaKnown RBP9.37□□□□□ -0.91
RBFOX1-223ENST00000620507 LNPEPQ9UIQ6 1025 aa9.37□□□□□ -0.91
RBFOX1-223ENST00000620507 SLC12A8A0AV02 714 aa9.36□□□□□ -0.91
RBFOX1-223ENST00000620507 PAGE1O75459 146 aa9.36□□□□□ -0.91
RBFOX1-223ENST00000620507 BEST1O76090 585 aa9.36□□□□□ -0.91
RBFOX1-223ENST00000620507 USP1O94782 785 aa9.36□□□□□ -0.91
RBFOX1-223ENST00000620507 TOP3BO95985 862 aaKnown RBP9.36□□□□□ -0.91
RBFOX1-223ENST00000620507 CRABP2P29373 138 aa9.36□□□□□ -0.91
RBFOX1-223ENST00000620507 CASP2P42575 452 aa9.36□□□□□ -0.91
RBFOX1-223ENST00000620507 LIMK2P53671 638 aa9.36□□□□□ -0.91
RBFOX1-223ENST00000620507 DSG1Q02413 1049 aa9.36□□□□□ -0.91
RBFOX1-223ENST00000620507 NSUN2Q08J23 767 aaKnown RBP eCLIP9.36□□□□□ -0.91
RBFOX1-223ENST00000620507 CYLC2Q14093 348 aaPredicted RBP9.36□□□□□ -0.91
RBFOX1-223ENST00000620507 CNGA3Q16281 694 aa9.36□□□□□ -0.91
RBFOX1-223ENST00000620507 KHDC1Q4VXA5 237 aaKnown RBP9.36□□□□□ -0.91
RBFOX1-223ENST00000620507 TIGD5Q53EQ6 642 aa9.36□□□□□ -0.91
RBFOX1-223ENST00000620507 RINLQ6ZS11 566 aa9.36□□□□□ -0.91
RBFOX1-223ENST00000620507 TAC4Q86UU9 113 aa9.36□□□□□ -0.91
RBFOX1-223ENST00000620507 DDIASQ8IXT1 998 aa9.36□□□□□ -0.91
RBFOX1-223ENST00000620507 AZIN2Q96A70 460 aa9.36□□□□□ -0.91
RBFOX1-223ENST00000620507 CCDC126Q96EE4 140 aa9.36□□□□□ -0.91
RBFOX1-223ENST00000620507 AGAP2Q99490 1192 aa9.36□□□□□ -0.91
RBFOX1-223ENST00000620507 EFCAB1Q9HAE3 211 aa9.36□□□□□ -0.91
RBFOX1-223ENST00000620507 LRCH1Q9Y2L9 728 aa9.36□□□□□ -0.91
RBFOX1-223ENST00000620507 ATAD5Q96QE3 1844 aa9.36□□□□□ -0.91
RBFOX1-223ENST00000620507 HEATR9A2RTY3 570 aa9.36□□□□□ -0.91
RBFOX1-223ENST00000620507 MSI1O43347 362 aaKnown RBP9.36□□□□□ -0.91
RBFOX1-223ENST00000620507 DLDP09622 509 aaKnown RBP9.36□□□□□ -0.91
RBFOX1-223ENST00000620507 HOXD10P28358 340 aa9.36□□□□□ -0.91
RBFOX1-223ENST00000620507 RPL14P50914 215 aaKnown RBP9.36□□□□□ -0.91
RBFOX1-223ENST00000620507 PRKAA2P54646 552 aa9.36□□□□□ -0.91
RBFOX1-223ENST00000620507 GRIK3Q13003 919 aa9.36□□□□□ -0.91
RBFOX1-223ENST00000620507 LAMB3Q13751 1172 aa9.36□□□□□ -0.91
RBFOX1-223ENST00000620507 FLOT2Q14254 428 aa9.36□□□□□ -0.91
RBFOX1-223ENST00000620507 BRMS1LQ5PSV4 323 aa9.36□□□□□ -0.91
RBFOX1-223ENST00000620507 TCHHL1Q5QJ38 904 aaPredicted RBP9.36□□□□□ -0.91
RBFOX1-223ENST00000620507 WLSQ5T9L3 541 aa9.36□□□□□ -0.91
RBFOX1-223ENST00000620507 IZUMO2Q6UXV1 221 aa9.36□□□□□ -0.91
RBFOX1-223ENST00000620507 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.36□□□□□ -0.91
RBFOX1-223ENST00000620507 ULK2Q8IYT8 1036 aa9.36□□□□□ -0.91
RBFOX1-223ENST00000620507 SPATA22Q8NHS9 363 aa9.36□□□□□ -0.91
RBFOX1-223ENST00000620507 RAET1EQ8TD07 263 aa9.36□□□□□ -0.91
RBFOX1-223ENST00000620507 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.36□□□□□ -0.91
RBFOX1-223ENST00000620507 ACBD6Q9BR61 282 aa9.36□□□□□ -0.91
RBFOX1-223ENST00000620507 SARS2Q9NP81 518 aaKnown RBP9.36□□□□□ -0.91
RBFOX1-223ENST00000620507 EURLQ9NYK6 297 aa9.36□□□□□ -0.91
RBFOX1-223ENST00000620507 MPP6Q9NZW5 540 aa9.36□□□□□ -0.91
RBFOX1-223ENST00000620507 ZNF212Q9UDV6 495 aa9.36□□□□□ -0.91
RBFOX1-223ENST00000620507 PCDHB5Q9Y5E4 795 aa9.36□□□□□ -0.91
RBFOX1-223ENST00000620507 F8W8V4 182 aa9.36□□□□□ -0.91
RBFOX1-223ENST00000620507 UBTFL6P0CB48 400 aaPredicted RBP9.36□□□□□ -0.91
RBFOX1-223ENST00000620507 MRNIPQ6NTE8 343 aa9.36□□□□□ -0.91
RBFOX1-223ENST00000620507 RIPOR1Q6ZS17 1223 aa9.36□□□□□ -0.91
RBFOX1-223ENST00000620507 CTU1Q7Z7A3 348 aaKnown RBP9.36□□□□□ -0.91
RBFOX1-223ENST00000620507 SLC41A1Q8IVJ1 513 aa9.36□□□□□ -0.91
RBFOX1-223ENST00000620507 KCTD4Q8WVF5 259 aa9.36□□□□□ -0.91
RBFOX1-223ENST00000620507 TEKT5Q96M29 485 aa9.36□□□□□ -0.91
RBFOX1-223ENST00000620507 EBF4Q9BQW3 602 aa9.36□□□□□ -0.91
RBFOX1-223ENST00000620507 DHRS4Q9BTZ2 278 aa9.36□□□□□ -0.91
RBFOX1-223ENST00000620507 RHOJQ9H4E5 214 aa9.36□□□□□ -0.91
RBFOX1-223ENST00000620507 DOCK1Q14185 1865 aa9.35□□□□□ -0.91
RBFOX1-223ENST00000620507 RAMP2O60895 175 aa9.35□□□□□ -0.91
RBFOX1-223ENST00000620507 RBP1P09455 135 aa9.35□□□□□ -0.91
RBFOX1-223ENST00000620507 GRIA4P48058 902 aa9.35□□□□□ -0.91
RBFOX1-223ENST00000620507 INHBEP58166 350 aa9.35□□□□□ -0.91
RBFOX1-223ENST00000620507 PPIDQ08752 370 aaKnown RBP9.35□□□□□ -0.91
RBFOX1-223ENST00000620507 OLIG2Q13516 323 aa9.35□□□□□ -0.91
RBFOX1-223ENST00000620507 PAFAH1B3Q15102 231 aaKnown RBP9.35□□□□□ -0.91
RBFOX1-223ENST00000620507 SDHAF4Q5VUM1 108 aa9.35□□□□□ -0.91
RBFOX1-223ENST00000620507 NET1Q7Z628 596 aaPredicted RBP9.35□□□□□ -0.91
RBFOX1-223ENST00000620507 MYLK4Q86YV6 388 aaPredicted RBP9.35□□□□□ -0.91
RBFOX1-223ENST00000620507 KYQ8NBH2 561 aa9.35□□□□□ -0.91
RBFOX1-223ENST00000620507 PIP4K2CQ8TBX8 421 aa9.35□□□□□ -0.91
RBFOX1-223ENST00000620507 IRGQQ8WZA9 623 aa9.35□□□□□ -0.91
RBFOX1-223ENST00000620507 FAM136AQ96C01 138 aa9.35□□□□□ -0.91
RBFOX1-223ENST00000620507 PHF21BQ96EK2 531 aa9.35□□□□□ -0.91
RBFOX1-223ENST00000620507 CATSPER2Q96P56 530 aa9.35□□□□□ -0.91
RBFOX1-223ENST00000620507 SMOQ99835 787 aa9.35□□□□□ -0.91
RBFOX1-223ENST00000620507 RHOBTB2Q9BYZ6 727 aa9.35□□□□□ -0.91
RBFOX1-223ENST00000620507 CXCL16Q9H2A7 254 aa9.35□□□□□ -0.91
RBFOX1-223ENST00000620507 GLOD4Q9HC38 313 aa9.35□□□□□ -0.91
RBFOX1-223ENST00000620507 CRTAC1Q9NQ79 661 aa9.35□□□□□ -0.91
RBFOX1-223ENST00000620507 MRGBPQ9NV56 204 aa9.35□□□□□ -0.91
RBFOX1-223ENST00000620507 ZNF358Q9NW07 568 aa9.35□□□□□ -0.91
RBFOX1-223ENST00000620507 HDAC3O15379 428 aa9.35□□□□□ -0.91
RBFOX1-223ENST00000620507 SNX2O60749 519 aa9.35□□□□□ -0.91
RBFOX1-223ENST00000620507 NDUFS3O75489 264 aa9.35□□□□□ -0.91
RBFOX1-223ENST00000620507 ZMPSTE24O75844 475 aa9.35□□□□□ -0.91
RBFOX1-223ENST00000620507 MT-CYBP00156 380 aaPredicted RBP9.35□□□□□ -0.91
RBFOX1-223ENST00000620507 S100BP04271 92 aaPredicted RBP9.35□□□□□ -0.91
RBFOX1-223ENST00000620507 TPBGLP0DKB5 382 aa9.35□□□□□ -0.91
RBFOX1-223ENST00000620507 LRPAP1P30533 357 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms