RNA–Protein interactions for RNA: ENST00000618944.4

TP53-223, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,404 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-223ENST00000618944 UPF1Q92900 1129 aaKnown RBP eCLIP11.4□□□□□ -0.588e-7■■■□□ 18.8
TP53-223ENST00000618944 CCDC124Q96CT7 223 aaKnown RBP11.4□□□□□ -0.58
TP53-223ENST00000618944 ZNF419Q96HQ0 510 aaPredicted RBP11.4□□□□□ -0.58
TP53-223ENST00000618944 SCYL1Q96KG9 808 aa11.4□□□□□ -0.58
TP53-223ENST00000618944 NDFIP2Q9NV92 336 aa11.4□□□□□ -0.58
TP53-223ENST00000618944 DNAJC28Q9NX36 388 aa11.4□□□□□ -0.58
TP53-223ENST00000618944 TLK1Q9UKI8 766 aa11.4□□□□□ -0.58
TP53-223ENST00000618944 ADAM28Q9UKQ2 775 aa11.4□□□□□ -0.58
TP53-223ENST00000618944 RUVBL2Q9Y230 463 aaKnown RBP11.4□□□□□ -0.58
TP53-223ENST00000618944 PCDHB12Q9Y5F1 795 aa11.4□□□□□ -0.58
TP53-223ENST00000618944 RAD54BQ9Y620 910 aa11.4□□□□□ -0.58
TP53-223ENST00000618944 CCDC189A1A4V9 331 aa11.4□□□□□ -0.58
TP53-223ENST00000618944 DPPA5A6NC42 116 aa11.4□□□□□ -0.58
TP53-223ENST00000618944 F8W8V4 182 aa11.4□□□□□ -0.58
TP53-223ENST00000618944 TK2O00142 265 aa11.4□□□□□ -0.58
TP53-223ENST00000618944 NEMP1O14524 444 aa11.4□□□□□ -0.58
TP53-223ENST00000618944 KIF1CO43896 1103 aaKnown RBP11.4□□□□□ -0.58
TP53-223ENST00000618944 VAPBO95292 243 aa11.4□□□□□ -0.58
TP53-223ENST00000618944 AHSGP02765 367 aa11.4□□□□□ -0.58
TP53-223ENST00000618944 PCSK1P29120 753 aa11.4□□□□□ -0.58
TP53-223ENST00000618944 CD52P31358 61 aa11.4□□□□□ -0.58
TP53-223ENST00000618944 TUBP50607 506 aa11.4□□□□□ -0.58
TP53-223ENST00000618944 CDH17Q12864 832 aa11.4□□□□□ -0.58
TP53-223ENST00000618944 CUL3Q13618 768 aa11.4□□□□□ -0.58
TP53-223ENST00000618944 GPR162Q16538 588 aa11.4□□□□□ -0.58
TP53-223ENST00000618944 TRMT5Q32P41 509 aaKnown RBP11.4□□□□□ -0.58
TP53-223ENST00000618944 PM20D1Q6GTS8 502 aa11.4□□□□□ -0.58
TP53-223ENST00000618944 TMEM154Q6P9G4 183 aa11.4□□□□□ -0.58
TP53-223ENST00000618944 DCLRE1AQ6PJP8 1040 aa11.4□□□□□ -0.58
TP53-223ENST00000618944 MYLK4Q86YV6 388 aaPredicted RBP11.4□□□□□ -0.58
TP53-223ENST00000618944 SLC41A1Q8IVJ1 513 aa11.4□□□□□ -0.58
TP53-223ENST00000618944 DENND6AQ8IWF6 608 aa11.4□□□□□ -0.58
TP53-223ENST00000618944 PYDC1Q8WXC3 89 aa11.4□□□□□ -0.58
TP53-223ENST00000618944 OR52B2Q96RD2 323 aa11.4□□□□□ -0.58
TP53-223ENST00000618944 GATA5Q9BWX5 397 aaPredicted RBP11.4□□□□□ -0.58
TP53-223ENST00000618944 FTHL17Q9BXU8 183 aa11.4□□□□□ -0.58
TP53-223ENST00000618944 BRD8Q9H0E9 1235 aa11.4□□□□□ -0.58
TP53-223ENST00000618944 CDH19Q9H159 772 aa11.4□□□□□ -0.58
TP53-223ENST00000618944 C1orf21Q9H246 121 aa11.4□□□□□ -0.58
TP53-223ENST00000618944 WDR55Q9H6Y2 383 aaPredicted RBP11.4□□□□□ -0.58
TP53-223ENST00000618944 ZNF212Q9UDV6 495 aa11.4□□□□□ -0.58
TP53-223ENST00000618944 PACSIN3Q9UKS6 424 aa11.4□□□□□ -0.58
TP53-223ENST00000618944 PPM1HQ9ULR3 514 aa11.4□□□□□ -0.58
TP53-223ENST00000618944 SORCS3Q9UPU3 1222 aa11.4□□□□□ -0.58
TP53-223ENST00000618944 NUP205Q92621 2012 aa11.4□□□□□ -0.58
TP53-223ENST00000618944 ERI2A8K979 691 aaKnown RBP11.39□□□□□ -0.59
TP53-223ENST00000618944 TIMM44O43615 452 aa11.39□□□□□ -0.59
TP53-223ENST00000618944 ZBTB14O43829 449 aa11.39□□□□□ -0.59
TP53-223ENST00000618944 MGEA5O60502 916 aa11.39□□□□□ -0.59
TP53-223ENST00000618944 TRIM13O60858 407 aa11.39□□□□□ -0.59
TP53-223ENST00000618944 PMPCBO75439 489 aa11.39□□□□□ -0.59
TP53-223ENST00000618944 MOCS2O96007 188 aaPredicted RBP11.39□□□□□ -0.59
TP53-223ENST00000618944 ITGB1P05556 798 aa11.39□□□□□ -0.59
TP53-223ENST00000618944 ATP5BP06576 529 aaKnown RBP11.39□□□□□ -0.59
TP53-223ENST00000618944 MPSTP25325 297 aa11.39□□□□□ -0.59
TP53-223ENST00000618944 GABRB3P28472 473 aa11.39□□□□□ -0.59
TP53-223ENST00000618944 LRRC36Q1X8D7 754 aa11.39□□□□□ -0.59
TP53-223ENST00000618944 INTS6LQ5JSJ4 861 aaKnown RBP11.39□□□□□ -0.59
TP53-223ENST00000618944 NAIF1Q69YI7 327 aaPredicted RBP11.39□□□□□ -0.59
TP53-223ENST00000618944 NAPEPLDQ6IQ20 393 aa11.39□□□□□ -0.59
TP53-223ENST00000618944 ESRP1Q6NXG1 681 aaKnown RBP11.39□□□□□ -0.59
TP53-223ENST00000618944 EPGNQ6UW88 154 aa11.39□□□□□ -0.59
TP53-223ENST00000618944 FRMD7Q6ZUT3 714 aa11.39□□□□□ -0.59
TP53-223ENST00000618944 METTL23Q86XA0 190 aa11.39□□□□□ -0.59
TP53-223ENST00000618944 TRPV1Q8NER1 839 aa11.39□□□□□ -0.59
TP53-223ENST00000618944 OR10T2Q8NGX3 314 aa11.39□□□□□ -0.59
TP53-223ENST00000618944 OR6Y1Q8NGX8 325 aa11.39□□□□□ -0.59
TP53-223ENST00000618944 KCTD4Q8WVF5 259 aa11.39□□□□□ -0.59
TP53-223ENST00000618944 CSNK1G1Q9HCP0 422 aa11.39□□□□□ -0.59
TP53-223ENST00000618944 SLC2A6Q9UGQ3 507 aa11.39□□□□□ -0.59
TP53-223ENST00000618944 CDY1Q9Y6F8 540 aa11.39□□□□□ -0.59
TP53-223ENST00000618944 BPTFQ12830 3046 aa11.39□□□□□ -0.59
TP53-223ENST00000618944 ODC1P11926 461 aa11.39□□□□□ -0.59
TP53-223ENST00000618944 SKIP12755 728 aa11.39□□□□□ -0.59
TP53-223ENST00000618944 HOXC8P31273 242 aa11.39□□□□□ -0.59
TP53-223ENST00000618944 SERPINB5P36952 375 aa11.39□□□□□ -0.59
TP53-223ENST00000618944 THPOP40225 353 aa11.39□□□□□ -0.59
TP53-223ENST00000618944 GRIA4P48058 902 aa11.39□□□□□ -0.59
TP53-223ENST00000618944 AP2B1P63010 937 aa11.39□□□□□ -0.59
TP53-223ENST00000618944 MPP1Q00013 466 aa11.39□□□□□ -0.59
TP53-223ENST00000618944 KLC1Q07866 573 aa11.39□□□□□ -0.59
TP53-223ENST00000618944 TCHHL1Q5QJ38 904 aaPredicted RBP11.39□□□□□ -0.59
TP53-223ENST00000618944 CLEC14AQ86T13 490 aa11.39□□□□□ -0.59
TP53-223ENST00000618944 ZC3HC1Q86WB0 502 aaKnown RBP11.39□□□□□ -0.59
TP53-223ENST00000618944 DEFB107AQ8IZN7 70 aa11.39□□□□□ -0.59
TP53-223ENST00000618944 PNPLA1Q8N8W4 532 aa11.39□□□□□ -0.59
TP53-223ENST00000618944 ISL2Q96A47 359 aa11.39□□□□□ -0.59
TP53-223ENST00000618944 VAT1Q99536 393 aa11.39□□□□□ -0.59
TP53-223ENST00000618944 OMDQ99983 421 aa11.39□□□□□ -0.59
TP53-223ENST00000618944 FICDQ9BVA6 458 aa11.39□□□□□ -0.59
TP53-223ENST00000618944 ACE2Q9BYF1 805 aaPredicted RBP11.39□□□□□ -0.59
TP53-223ENST00000618944 SLC39A8Q9C0K1 460 aa11.39□□□□□ -0.59
TP53-223ENST00000618944 STN1Q9H668 368 aaKnown RBP11.39□□□□□ -0.59
TP53-223ENST00000618944 RRN3Q9NYV6 651 aa11.39□□□□□ -0.59
TP53-223ENST00000618944 MPP6Q9NZW5 540 aa11.39□□□□□ -0.59
TP53-223ENST00000618944 ANGPTL2Q9UKU9 493 aa11.39□□□□□ -0.59
TP53-223ENST00000618944 GIT1Q9Y2X7 761 aa11.39□□□□□ -0.59
TP53-223ENST00000618944 A6NHS1 94 aa11.38□□□□□ -0.59
TP53-223ENST00000618944 PAGE1O75459 146 aa11.38□□□□□ -0.59
TP53-223ENST00000618944 OR4Q2P0C623 313 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms