RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 KIAA0907Q7Z7F0 614 aaPredicted RBP8.82□□□□□ -1
GPC6-202ENST00000617456 MMAAQ8IVH4 418 aaKnown RBP8.82□□□□□ -1
GPC6-202ENST00000617456 DHX40Q8IX18 779 aaKnown RBP8.82□□□□□ -1
GPC6-202ENST00000617456 PPM1KQ8N3J5 372 aa8.82□□□□□ -1
GPC6-202ENST00000617456 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.82□□□□□ -1
GPC6-202ENST00000617456 MLKLQ8NB16 471 aa8.82□□□□□ -1
GPC6-202ENST00000617456 KDM1BQ8NB78 822 aa8.82□□□□□ -1
GPC6-202ENST00000617456 RNF214Q8ND24 703 aa8.82□□□□□ -1
GPC6-202ENST00000617456 WFDC5Q8TCV5 224 aa8.82□□□□□ -1
GPC6-202ENST00000617456 MIPOL1Q8TD10 442 aa8.82□□□□□ -1
GPC6-202ENST00000617456 EDEM1Q92611 657 aa8.82□□□□□ -1
GPC6-202ENST00000617456 THOC1Q96FV9 657 aaKnown RBP8.82□□□□□ -1
GPC6-202ENST00000617456 LGMNQ99538 433 aa8.82□□□□□ -1
GPC6-202ENST00000617456 OMDQ99983 421 aa8.82□□□□□ -1
GPC6-202ENST00000617456 DDX50Q9BQ39 737 aaKnown RBP8.82□□□□□ -1
GPC6-202ENST00000617456 ULBP1Q9BZM6 244 aa8.82□□□□□ -1
GPC6-202ENST00000617456 RBSNQ9H1K0 784 aa8.82□□□□□ -1
GPC6-202ENST00000617456 NEUROG2Q9H2A3 272 aa8.82□□□□□ -1
GPC6-202ENST00000617456 SPATA7Q9P0W8 599 aa8.82□□□□□ -1
GPC6-202ENST00000617456 STIM2Q9P246 746 aa8.82□□□□□ -1
GPC6-202ENST00000617456 ARID1BQ8NFD5 2236 aaPredicted RBP8.82□□□□□ -1
GPC6-202ENST00000617456 GOLGA6L7A0A1B0GV03 622 aa8.81□□□□□ -1
GPC6-202ENST00000617456 A0A1W2PR77 199 aa8.81□□□□□ -1
GPC6-202ENST00000617456 YJEFN3A6XGL0 299 aa8.81□□□□□ -1
GPC6-202ENST00000617456 E7ENQ6 273 aa8.81□□□□□ -1
GPC6-202ENST00000617456 YKT6O15498 198 aa8.81□□□□□ -1
GPC6-202ENST00000617456 MSI1O43347 362 aaKnown RBP8.81□□□□□ -1
GPC6-202ENST00000617456 SIN3BO75182 1162 aa8.81□□□□□ -1
GPC6-202ENST00000617456 KRT38O76015 456 aa8.81□□□□□ -1
GPC6-202ENST00000617456 IGLV3-27P01718 113 aa8.81□□□□□ -1
GPC6-202ENST00000617456 GLI1P08151 1106 aa8.81□□□□□ -1
GPC6-202ENST00000617456 EPHA8P29322 1005 aaPredicted RBP8.81□□□□□ -1
GPC6-202ENST00000617456 GPD2P43304 727 aa8.81□□□□□ -1
GPC6-202ENST00000617456 PSMD8P48556 350 aa8.81□□□□□ -1
GPC6-202ENST00000617456 SLC11A2P49281 568 aa8.81□□□□□ -1
GPC6-202ENST00000617456 ARRB1P49407 418 aaPredicted RBP8.81□□□□□ -1
GPC6-202ENST00000617456 SNX16P57768 344 aa8.81□□□□□ -1
GPC6-202ENST00000617456 ST8SIA6P61647 398 aa8.81□□□□□ -1
GPC6-202ENST00000617456 TPM4P67936 248 aa8.81□□□□□ -1
GPC6-202ENST00000617456 ADIGQ0VDE8 80 aa8.81□□□□□ -1
GPC6-202ENST00000617456 CST6Q15828 149 aa8.81□□□□□ -1
GPC6-202ENST00000617456 PPP1R15BQ5SWA1 713 aa8.81□□□□□ -1
GPC6-202ENST00000617456 ARHGAP40Q5TG30 622 aa8.81□□□□□ -1
GPC6-202ENST00000617456 SFMBT2Q5VUG0 894 aa8.81□□□□□ -1
GPC6-202ENST00000617456 PMF1Q6P1K2 205 aa8.81□□□□□ -1
GPC6-202ENST00000617456 USP30Q70CQ3 517 aa8.81□□□□□ -1
GPC6-202ENST00000617456 TMEM110Q86TL2 294 aa8.81□□□□□ -1
GPC6-202ENST00000617456 ERICH1Q86X53 443 aa8.81□□□□□ -1
GPC6-202ENST00000617456 LRRC49Q8IUZ0 686 aa8.81□□□□□ -1
GPC6-202ENST00000617456 VPS37AQ8NEZ2 397 aa8.81□□□□□ -1
GPC6-202ENST00000617456 OR2T34Q8NGX1 318 aa8.81□□□□□ -1
GPC6-202ENST00000617456 TSC1Q92574 1164 aa8.81□□□□□ -1
GPC6-202ENST00000617456 SERAC1Q96JX3 654 aa8.81□□□□□ -1
GPC6-202ENST00000617456 SERPINB11Q96P15 392 aa8.81□□□□□ -1
GPC6-202ENST00000617456 MED15Q96RN5 788 aa8.81□□□□□ -1
GPC6-202ENST00000617456 SRRTQ9BXP5 876 aaKnown RBP8.81□□□□□ -1
GPC6-202ENST00000617456 FBXO9Q9UK97 447 aaPredicted RBP8.81□□□□□ -1
GPC6-202ENST00000617456 CLCA2Q9UQC9 943 aa8.81□□□□□ -1
GPC6-202ENST00000617456 PCDHB4Q9Y5E5 795 aa8.81□□□□□ -1
GPC6-202ENST00000617456 MYLKQ15746 1914 aa8.81□□□□□ -1
GPC6-202ENST00000617456 PLXNA2O75051 1894 aa8.81□□□□□ -1
GPC6-202ENST00000617456 TLR4O00206 839 aa8.8□□□□□ -1
GPC6-202ENST00000617456 SDC3O75056 442 aa8.8□□□□□ -1
GPC6-202ENST00000617456 NEBLO76041 1014 aa8.8□□□□□ -1
GPC6-202ENST00000617456 LTFP02788 710 aa8.8□□□□□ -1
GPC6-202ENST00000617456 FOSL1P15407 271 aa8.8□□□□□ -1
GPC6-202ENST00000617456 CKMT2P17540 419 aa8.8□□□□□ -1
GPC6-202ENST00000617456 CSKP41240 450 aa8.8□□□□□ -1
GPC6-202ENST00000617456 NXPH1P58417 271 aa8.8□□□□□ -1
GPC6-202ENST00000617456 INSM1Q01101 510 aaPredicted RBP8.8□□□□□ -1
GPC6-202ENST00000617456 KCNJ12Q14500 433 aa8.8□□□□□ -1
GPC6-202ENST00000617456 ARID5BQ14865 1188 aa8.8□□□□□ -1
GPC6-202ENST00000617456 IQCB1Q15051 598 aa8.8□□□□□ -1
GPC6-202ENST00000617456 CLPPQ16740 277 aaPredicted RBP8.8□□□□□ -1
GPC6-202ENST00000617456 KLHL40Q2TBA0 621 aa8.8□□□□□ -1
GPC6-202ENST00000617456 SLC45A4Q5BKX6 768 aa8.8□□□□□ -1
GPC6-202ENST00000617456 BROXQ5VW32 411 aa8.8□□□□□ -1
GPC6-202ENST00000617456 CAVIN1Q6NZI2 390 aaKnown RBP8.8□□□□□ -1
GPC6-202ENST00000617456 SPATA21Q7Z572 469 aa8.8□□□□□ -1
GPC6-202ENST00000617456 OR14C36Q8NHC7 312 aa8.8□□□□□ -1
GPC6-202ENST00000617456 GIMAP7Q8NHV1 300 aa8.8□□□□□ -1
GPC6-202ENST00000617456 TFAP2BQ92481 460 aa8.8□□□□□ -1
GPC6-202ENST00000617456 YIPF2Q9BWQ6 316 aa8.8□□□□□ -1
GPC6-202ENST00000617456 MAK16Q9BXY0 300 aaKnown RBP8.8□□□□□ -1
GPC6-202ENST00000617456 SLC4A5Q9BY07 1137 aa8.8□□□□□ -1
GPC6-202ENST00000617456 CPNE5Q9HCH3 593 aa8.8□□□□□ -1
GPC6-202ENST00000617456 ASNSD1Q9NWL6 643 aa8.8□□□□□ -1
GPC6-202ENST00000617456 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.8□□□□□ -1
GPC6-202ENST00000617456 ITGB1BP2Q9UKP3 347 aa8.8□□□□□ -1
GPC6-202ENST00000617456 SCML1Q9UN30 329 aa8.8□□□□□ -1
GPC6-202ENST00000617456 TLR6Q9Y2C9 796 aa8.8□□□□□ -1
GPC6-202ENST00000617456 ATMQ13315 3056 aa8.79□□□□□ -1
GPC6-202ENST00000617456 A0A087WUV0 522 aaPredicted RBP8.79□□□□□ -1
GPC6-202ENST00000617456 TBC1D3DA0A087WVF3 549 aa8.79□□□□□ -1
GPC6-202ENST00000617456 TBC1D3IA0A087WXS9 549 aa8.79□□□□□ -1
GPC6-202ENST00000617456 TBC1D3EA0A087X179 549 aa8.79□□□□□ -1
GPC6-202ENST00000617456 TBC1D3KA0A087X1G2 549 aa8.79□□□□□ -1
GPC6-202ENST00000617456 TYW5A2RUC4 315 aaKnown RBP8.79□□□□□ -1
GPC6-202ENST00000617456 TBC1D3FA6NER0 549 aaPredicted RBP8.79□□□□□ -1
GPC6-202ENST00000617456 CAPN8A6NHC0 703 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms