RNA–Protein interactions for RNA: ENST00000613104.1

ATF3-210, Transcript of activating transcription factor 3, humanhuman

TSL 1 (best) BASIC

Gene ATF3, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-210ENST00000613104 TRIM67Q6ZTA4 783 aa9.5□□□□□ -0.89
ATF3-210ENST00000613104 BZW1Q7L1Q6 419 aaKnown RBP9.5□□□□□ -0.89
ATF3-210ENST00000613104 PACS2Q86VP3 889 aa9.5□□□□□ -0.89
ATF3-210ENST00000613104 KDM1BQ8NB78 822 aa9.5□□□□□ -0.89
ATF3-210ENST00000613104 TTC13Q8NBP0 860 aa9.5□□□□□ -0.89
ATF3-210ENST00000613104 UCMAQ8WVF2 138 aa9.5□□□□□ -0.89
ATF3-210ENST00000613104 P3H4Q92791 437 aa9.5□□□□□ -0.89
ATF3-210ENST00000613104 FATE1Q969F0 183 aa9.5□□□□□ -0.89
ATF3-210ENST00000613104 MYO19Q96H55 970 aa9.5□□□□□ -0.89
ATF3-210ENST00000613104 MRGPRX3Q96LB0 322 aa9.5□□□□□ -0.89
ATF3-210ENST00000613104 TSGA13Q96PP4 275 aa9.5□□□□□ -0.89
ATF3-210ENST00000613104 KCNK17Q96T54 332 aa9.5□□□□□ -0.89
ATF3-210ENST00000613104 SPON2Q9BUD6 331 aa9.5□□□□□ -0.89
ATF3-210ENST00000613104 C2orf49Q9BVC5 232 aaPredicted RBP9.5□□□□□ -0.89
ATF3-210ENST00000613104 TBC1D17Q9HA65 648 aa9.5□□□□□ -0.89
ATF3-210ENST00000613104 THAP10Q9P2Z0 257 aaPredicted RBP9.5□□□□□ -0.89
ATF3-210ENST00000613104 IPO11Q9UI26 975 aaKnown RBP9.5□□□□□ -0.89
ATF3-210ENST00000613104 VPS51Q9UID3 782 aa9.5□□□□□ -0.89
ATF3-210ENST00000613104 ERVW-1Q9UQF0 538 aa9.5□□□□□ -0.89
ATF3-210ENST00000613104 SAR1BQ9Y6B6 198 aa9.5□□□□□ -0.89
ATF3-210ENST00000613104 SHROOM3Q8TF72 1996 aa9.5□□□□□ -0.89
ATF3-210ENST00000613104 MYO18AQ92614 2054 aaKnown RBP9.49□□□□□ -0.89
ATF3-210ENST00000613104 ANTXRLA6NF34 631 aa9.49□□□□□ -0.89
ATF3-210ENST00000613104 ZSCAN5CA6NGD5 496 aaPredicted RBP9.49□□□□□ -0.89
ATF3-210ENST00000613104 FAM170BA6NMN3 283 aa9.49□□□□□ -0.89
ATF3-210ENST00000613104 J3KR12 359 aa9.49□□□□□ -0.89
ATF3-210ENST00000613104 CBX4O00257 560 aa9.49□□□□□ -0.89
ATF3-210ENST00000613104 NPC1O15118 1278 aa9.49□□□□□ -0.89
ATF3-210ENST00000613104 ZNF185O15231 689 aa9.49□□□□□ -0.89
ATF3-210ENST00000613104 ZNF500O60304 480 aaPredicted RBP9.49□□□□□ -0.89
ATF3-210ENST00000613104 PRAMEF11O60813 436 aa9.49□□□□□ -0.89
ATF3-210ENST00000613104 MAP3K6O95382 1288 aa9.49□□□□□ -0.89
ATF3-210ENST00000613104 PEX11BO96011 259 aa9.49□□□□□ -0.89
ATF3-210ENST00000613104 FGGP02679 453 aa9.49□□□□□ -0.89
ATF3-210ENST00000613104 CCNCP24863 283 aa9.49□□□□□ -0.89
ATF3-210ENST00000613104 CTSOP43234 321 aaPredicted RBP9.49□□□□□ -0.89
ATF3-210ENST00000613104 ECT2LQ008S8 904 aa9.49□□□□□ -0.89
ATF3-210ENST00000613104 OTUD4Q01804 1114 aaKnown RBP9.49□□□□□ -0.89
ATF3-210ENST00000613104 SLC20A2Q08357 652 aa9.49□□□□□ -0.89
ATF3-210ENST00000613104 PPIDQ08752 370 aaKnown RBP9.49□□□□□ -0.89
ATF3-210ENST00000613104 PDK1Q15118 436 aa9.49□□□□□ -0.89
ATF3-210ENST00000613104 E2F5Q15329 346 aa9.49□□□□□ -0.89
ATF3-210ENST00000613104 LONRF2Q1L5Z9 754 aa9.49□□□□□ -0.89
ATF3-210ENST00000613104 HSF5Q4G112 596 aaPredicted RBP9.49□□□□□ -0.89
ATF3-210ENST00000613104 EMC10Q5UCC4 262 aa9.49□□□□□ -0.89
ATF3-210ENST00000613104 EGFLAMQ63HQ2 1017 aa9.49□□□□□ -0.89
ATF3-210ENST00000613104 CWF19L1Q69YN2 538 aaKnown RBP9.49□□□□□ -0.89
ATF3-210ENST00000613104 TIGD7Q6NT04 549 aaPredicted RBP9.49□□□□□ -0.89
ATF3-210ENST00000613104 RETSATQ6NUM9 610 aa9.49□□□□□ -0.89
ATF3-210ENST00000613104 CREG2Q8IUH2 290 aa9.49□□□□□ -0.89
ATF3-210ENST00000613104 SYNPOQ8N3V7 929 aa9.49□□□□□ -0.89
ATF3-210ENST00000613104 ATPAF2Q8N5M1 289 aa9.49□□□□□ -0.89
ATF3-210ENST00000613104 PJA1Q8NG27 643 aa9.49□□□□□ -0.89
ATF3-210ENST00000613104 CCDC26Q8TAB7 109 aa9.49□□□□□ -0.89
ATF3-210ENST00000613104 ACTL9Q8TC94 416 aa9.49□□□□□ -0.89
ATF3-210ENST00000613104 USP33Q8TEY7 942 aa9.49□□□□□ -0.89
ATF3-210ENST00000613104 CYB5D2Q8WUJ1 264 aa9.49□□□□□ -0.89
ATF3-210ENST00000613104 MAIP1Q8WWC4 291 aa9.49□□□□□ -0.89
ATF3-210ENST00000613104 SORCS1Q8WY21 1168 aa9.49□□□□□ -0.89
ATF3-210ENST00000613104 CLDN23Q96B33 292 aa9.49□□□□□ -0.89
ATF3-210ENST00000613104 HAUS1Q96CS2 278 aa9.49□□□□□ -0.89
ATF3-210ENST00000613104 MS4A14Q96JA4 679 aa9.49□□□□□ -0.89
ATF3-210ENST00000613104 FRMD8P1Q9BZ68 369 aaPredicted RBP9.49□□□□□ -0.89
ATF3-210ENST00000613104 FOXQ1Q9C009 403 aa9.49□□□□□ -0.89
ATF3-210ENST00000613104 CIPCQ9C0C6 399 aa9.49□□□□□ -0.89
ATF3-210ENST00000613104 BRD8Q9H0E9 1235 aa9.49□□□□□ -0.89
ATF3-210ENST00000613104 SP110Q9HB58 689 aa9.49□□□□□ -0.89
ATF3-210ENST00000613104 RBM12Q9NTZ6 932 aaKnown RBP9.49□□□□□ -0.89
ATF3-210ENST00000613104 SAE1Q9UBE0 346 aaPredicted RBP9.49□□□□□ -0.89
ATF3-210ENST00000613104 HPCAL4Q9UM19 191 aa9.49□□□□□ -0.89
ATF3-210ENST00000613104 NDRG2Q9UN36 371 aaKnown RBP9.49□□□□□ -0.89
ATF3-210ENST00000613104 HS3ST2Q9Y278 367 aa9.49□□□□□ -0.89
ATF3-210ENST00000613104 R3HDM2Q9Y2K5 976 aaKnown RBP9.49□□□□□ -0.89
ATF3-210ENST00000613104 MTF2Q9Y483 593 aaPredicted RBP9.49□□□□□ -0.89
ATF3-210ENST00000613104 HEY1Q9Y5J3 304 aa9.49□□□□□ -0.89
ATF3-210ENST00000613104 F5P12259 2224 aa9.48□□□□□ -0.89
ATF3-210ENST00000613104 HACD1B0YJ81 288 aa9.48□□□□□ -0.89
ATF3-210ENST00000613104 ESPNB1AK53 854 aa9.48□□□□□ -0.89
ATF3-210ENST00000613104 PGRMC1O00264 195 aaKnown RBP9.48□□□□□ -0.89
ATF3-210ENST00000613104 PPP1R12AO14974 1030 aaPredicted RBP9.48□□□□□ -0.89
ATF3-210ENST00000613104 ATP9BO43861 1147 aa9.48□□□□□ -0.89
ATF3-210ENST00000613104 RNF40O75150 1001 aa9.48□□□□□ -0.89
ATF3-210ENST00000613104 SRCP12931 536 aa9.48□□□□□ -0.89
ATF3-210ENST00000613104 NUMBP49757 651 aa9.48□□□□□ -0.89
ATF3-210ENST00000613104 STK19P49842 368 aaPredicted RBP9.48□□□□□ -0.89
ATF3-210ENST00000613104 SERPINH1P50454 418 aaKnown RBP9.48□□□□□ -0.89
ATF3-210ENST00000613104 SEC13P55735 322 aa9.48□□□□□ -0.89
ATF3-210ENST00000613104 GEMIN4P57678 1058 aaKnown RBP9.48□□□□□ -0.89
ATF3-210ENST00000613104 LRRC32Q14392 662 aa9.48□□□□□ -0.89
ATF3-210ENST00000613104 ZNF234Q14588 700 aa9.48□□□□□ -0.89
ATF3-210ENST00000613104 RFTN1Q14699 578 aaPredicted RBP9.48□□□□□ -0.89
ATF3-210ENST00000613104 UBXN2BQ14CS0 331 aa9.48□□□□□ -0.89
ATF3-210ENST00000613104 PRKD1Q15139 912 aaPredicted RBP9.48□□□□□ -0.89
ATF3-210ENST00000613104 INO80DQ53TQ3 878 aaPredicted RBP9.48□□□□□ -0.89
ATF3-210ENST00000613104 CCDC181Q5TID7 509 aa9.48□□□□□ -0.89
ATF3-210ENST00000613104 ZNF354CQ86Y25 554 aa9.48□□□□□ -0.89
ATF3-210ENST00000613104 CCDC13Q8IYE1 715 aa9.48□□□□□ -0.89
ATF3-210ENST00000613104 CCDC105Q8IYK2 499 aa9.48□□□□□ -0.89
ATF3-210ENST00000613104 SH2D3CQ8N5H7 860 aa9.48□□□□□ -0.89
ATF3-210ENST00000613104 CCDC33Q8N5R6 958 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms