RNA–Protein interactions for RNA: ENST00000611733.4

CLK4-215, Transcript of CDC like kinase 4, humanhuman

TSL 5 BASIC

Gene CLK4, Length 2,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-215ENST00000611733 ERVW-1Q9UQF0 538 aa12.3□□□□□ -0.44
CLK4-215ENST00000611733 ZNF148Q9UQR1 794 aa12.3□□□□□ -0.44
CLK4-215ENST00000611733 RAD54BQ9Y620 910 aa12.3□□□□□ -0.44
CLK4-215ENST00000611733 MUSKO15146 869 aa12.29□□□□□ -0.44
CLK4-215ENST00000611733 NCAM2O15394 837 aa12.29□□□□□ -0.44
CLK4-215ENST00000611733 GJB3O75712 270 aa12.29□□□□□ -0.44
CLK4-215ENST00000611733 JCHAINP01591 159 aa12.29□□□□□ -0.44
CLK4-215ENST00000611733 APODP05090 189 aa12.29□□□□□ -0.44
CLK4-215ENST00000611733 COILP38432 576 aaPredicted RBP12.29□□□□□ -0.44
CLK4-215ENST00000611733 CLCN6P51797 869 aa12.29□□□□□ -0.44
CLK4-215ENST00000611733 ECT2LQ008S8 904 aa12.29□□□□□ -0.44
CLK4-215ENST00000611733 IL10RBQ08334 325 aa12.29□□□□□ -0.44
CLK4-215ENST00000611733 WASHC5Q12768 1159 aa12.29□□□□□ -0.44
CLK4-215ENST00000611733 EGFLAMQ63HQ2 1017 aa12.29□□□□□ -0.44
CLK4-215ENST00000611733 BZW1Q7L1Q6 419 aaKnown RBP12.29□□□□□ -0.44
CLK4-215ENST00000611733 SIX5Q8N196 739 aa12.29□□□□□ -0.44
CLK4-215ENST00000611733 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.29□□□□□ -0.44
CLK4-215ENST00000611733 C2orf49Q9BVC5 232 aaPredicted RBP12.29□□□□□ -0.44
CLK4-215ENST00000611733 ARHGEF3Q9NR81 526 aa12.29□□□□□ -0.44
CLK4-215ENST00000611733 WNT16Q9UBV4 365 aa12.29□□□□□ -0.44
CLK4-215ENST00000611733 HPCAL4Q9UM19 191 aa12.29□□□□□ -0.44
CLK4-215ENST00000611733 FCF1Q9Y324 198 aaKnown RBP12.29□□□□□ -0.44
CLK4-215ENST00000611733 CHD5Q8TDI0 1954 aa12.29□□□□□ -0.44
CLK4-215ENST00000611733 F5P12259 2224 aa12.29□□□□□ -0.44
CLK4-215ENST00000611733 BCLAF3A2AJT9 711 aaKnown RBP12.29□□□□□ -0.44
CLK4-215ENST00000611733 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.29□□□□□ -0.44
CLK4-215ENST00000611733 PPP1R12AO14974 1030 aaPredicted RBP12.29□□□□□ -0.44
CLK4-215ENST00000611733 MATN3O15232 486 aa12.29□□□□□ -0.44
CLK4-215ENST00000611733 KCNN4O15554 427 aa12.29□□□□□ -0.44
CLK4-215ENST00000611733 PHF2O75151 1096 aa12.29□□□□□ -0.44
CLK4-215ENST00000611733 ZSCAN5DPP0CG00 497 aa12.29□□□□□ -0.44
CLK4-215ENST00000611733 CHRM1P11229 460 aaPredicted RBP12.29□□□□□ -0.44
CLK4-215ENST00000611733 SRCP12931 536 aa12.29□□□□□ -0.44
CLK4-215ENST00000611733 CCNB1P14635 433 aa12.29□□□□□ -0.44
CLK4-215ENST00000611733 GLULP15104 373 aa12.29□□□□□ -0.44
CLK4-215ENST00000611733 DMC1Q14565 340 aa12.29□□□□□ -0.44
CLK4-215ENST00000611733 CCDC137Q6PK04 289 aaKnown RBP12.29□□□□□ -0.44
CLK4-215ENST00000611733 ZNF572Q7Z3I7 529 aaPredicted RBP12.29□□□□□ -0.44
CLK4-215ENST00000611733 PGBD5Q8N414 524 aa12.29□□□□□ -0.44
CLK4-215ENST00000611733 CNTD1Q8N815 330 aa12.29□□□□□ -0.44
CLK4-215ENST00000611733 ZNF557Q8N988 423 aaPredicted RBP12.29□□□□□ -0.44
CLK4-215ENST00000611733 C12orf50Q8NA57 414 aaPredicted RBP12.29□□□□□ -0.44
CLK4-215ENST00000611733 WFIKKN2Q8TEU8 576 aa12.29□□□□□ -0.44
CLK4-215ENST00000611733 HTR3CQ8WXA8 447 aa12.29□□□□□ -0.44
CLK4-215ENST00000611733 ACDQ96AP0 544 aa12.29□□□□□ -0.44
CLK4-215ENST00000611733 UHRF1Q96T88 793 aaPredicted RBP12.29□□□□□ -0.44
CLK4-215ENST00000611733 KRT12Q99456 494 aa12.29□□□□□ -0.44
CLK4-215ENST00000611733 L2HGDHQ9H9P8 463 aa12.29□□□□□ -0.44
CLK4-215ENST00000611733 POLR3BQ9NW08 1133 aaPredicted RBP12.29□□□□□ -0.44
CLK4-215ENST00000611733 KIAA1549LQ6ZVL6 1849 aa12.28□□□□□ -0.44
CLK4-215ENST00000611733 A0A0C4DFX4 3053 aa12.28□□□□□ -0.44
CLK4-215ENST00000611733 TTC34A8MYJ7 566 aa12.28□□□□□ -0.44
CLK4-215ENST00000611733 HACD1B0YJ81 288 aa12.28□□□□□ -0.44
CLK4-215ENST00000611733 F5H423 210 aaPredicted RBP12.28□□□□□ -0.44
CLK4-215ENST00000611733 ZNF821O75541 412 aaPredicted RBP12.28□□□□□ -0.44
CLK4-215ENST00000611733 DLDP09622 509 aaKnown RBP12.28□□□□□ -0.44
CLK4-215ENST00000611733 HLA-EP13747 358 aa12.28□□□□□ -0.44
CLK4-215ENST00000611733 PTPN3P26045 913 aa12.28□□□□□ -0.44
CLK4-215ENST00000611733 TIE1P35590 1138 aa12.28□□□□□ -0.44
CLK4-215ENST00000611733 WASP42768 502 aa12.28□□□□□ -0.44
CLK4-215ENST00000611733 KIR2DL1P43626 348 aaPredicted RBP12.28□□□□□ -0.44
CLK4-215ENST00000611733 RGRP47804 291 aa12.28□□□□□ -0.44
CLK4-215ENST00000611733 ZXDAP98168 799 aa12.28□□□□□ -0.44
CLK4-215ENST00000611733 TRIP13Q15645 432 aaPredicted RBP12.28□□□□□ -0.44
CLK4-215ENST00000611733 C2orf27AQ580R0 203 aa12.28□□□□□ -0.44
CLK4-215ENST00000611733 DGKKQ5KSL6 1271 aa12.28□□□□□ -0.44
CLK4-215ENST00000611733 DRICH1Q6PGQ1 229 aaPredicted RBP12.28□□□□□ -0.44
CLK4-215ENST00000611733 LRRC49Q8IUZ0 686 aa12.28□□□□□ -0.44
CLK4-215ENST00000611733 ZNF687Q8N1G0 1237 aa12.28□□□□□ -0.44
CLK4-215ENST00000611733 TAB3Q8N5C8 712 aaPredicted RBP12.28□□□□□ -0.44
CLK4-215ENST00000611733 ATP11CQ8NB49 1132 aa12.28□□□□□ -0.44
CLK4-215ENST00000611733 TSEN2Q8NCE0 465 aaKnown RBP12.28□□□□□ -0.44
CLK4-215ENST00000611733 MAML1Q92585 1016 aa12.28□□□□□ -0.44
CLK4-215ENST00000611733 NSMCE3Q96MG7 304 aa12.28□□□□□ -0.44
CLK4-215ENST00000611733 FOXQ1Q9C009 403 aa12.28□□□□□ -0.44
CLK4-215ENST00000611733 UBA2Q9UBT2 640 aaPredicted RBP12.28□□□□□ -0.44
CLK4-215ENST00000611733 AMACRQ9UHK6 382 aa12.28□□□□□ -0.44
CLK4-215ENST00000611733 DRG1Q9Y295 367 aaKnown RBP12.28□□□□□ -0.44
CLK4-215ENST00000611733 TMCC1O94876 653 aa12.28□□□□□ -0.44
CLK4-215ENST00000611733 ITGAVP06756 1048 aa12.28□□□□□ -0.44
CLK4-215ENST00000611733 TARSP26639 723 aaKnown RBP12.28□□□□□ -0.44
CLK4-215ENST00000611733 MAXP61244 160 aa12.28□□□□□ -0.44
CLK4-215ENST00000611733 GRSF1Q12849 480 aaKnown RBP eCLIP12.28□□□□□ -0.44
CLK4-215ENST00000611733 TUBB2AQ13885 445 aa12.28□□□□□ -0.44
CLK4-215ENST00000611733 ZNF234Q14588 700 aa12.28□□□□□ -0.44
CLK4-215ENST00000611733 LBRQ14739 615 aaKnown RBP12.28□□□□□ -0.44
CLK4-215ENST00000611733 CDKL3Q8IVW4 592 aaPredicted RBP12.28□□□□□ -0.44
CLK4-215ENST00000611733 UBALD2Q8IYN6 164 aa12.28□□□□□ -0.44
CLK4-215ENST00000611733 SH2D3CQ8N5H7 860 aa12.28□□□□□ -0.44
CLK4-215ENST00000611733 NOA1Q8NC60 698 aaKnown RBP12.28□□□□□ -0.44
CLK4-215ENST00000611733 CCDC110Q8TBZ0 833 aa12.28□□□□□ -0.44
CLK4-215ENST00000611733 EXOC2Q96KP1 924 aa12.28□□□□□ -0.44
CLK4-215ENST00000611733 CCDC114Q96M63 670 aa12.28□□□□□ -0.44
CLK4-215ENST00000611733 AGAP3Q96P47 875 aa12.28□□□□□ -0.44
CLK4-215ENST00000611733 HINFPQ9BQA5 517 aa12.28□□□□□ -0.44
CLK4-215ENST00000611733 TUBB2BQ9BVA1 445 aa12.28□□□□□ -0.44
CLK4-215ENST00000611733 TNKS2Q9H2K2 1166 aa12.28□□□□□ -0.44
CLK4-215ENST00000611733 RBM22Q9NW64 420 aaKnown RBP eCLIP12.28□□□□□ -0.44
CLK4-215ENST00000611733 CACNA2D2Q9NY47 1150 aa12.28□□□□□ -0.44
CLK4-215ENST00000611733 GOLGA6L10A0A0M3HER8 536 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms