RNA–Protein interactions for RNA: ENST00000608674.5

TOM1-218, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1, Length 541 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-218ENST00000608674 LINGO4Q6UY18 593 aa13.54□□□□□ -0.24
TOM1-218ENST00000608674 STRADAQ7RTN6 431 aa13.54□□□□□ -0.24
TOM1-218ENST00000608674 PRPF39Q86UA1 669 aaKnown RBP13.54□□□□□ -0.24
TOM1-218ENST00000608674 DRC7Q8IY82 874 aa13.54□□□□□ -0.24
TOM1-218ENST00000608674 CHCHD4Q8N4Q1 142 aa13.54□□□□□ -0.24
TOM1-218ENST00000608674 OR7D4Q8NG98 312 aa13.54□□□□□ -0.24
TOM1-218ENST00000608674 JOSD2Q8TAC2 188 aa13.54□□□□□ -0.24
TOM1-218ENST00000608674 PCDHB18PQ96TA0 734 aa13.54□□□□□ -0.24
TOM1-218ENST00000608674 CDC6Q99741 560 aa13.54□□□□□ -0.24
TOM1-218ENST00000608674 AGPAT1Q99943 283 aa13.54□□□□□ -0.24
TOM1-218ENST00000608674 ORAI3Q9BRQ5 295 aa13.54□□□□□ -0.24
TOM1-218ENST00000608674 ATP13A1Q9HD20 1204 aa13.54□□□□□ -0.24
TOM1-218ENST00000608674 DYRK4Q9NR20 520 aa13.54□□□□□ -0.24
TOM1-218ENST00000608674 PPARGC1AQ9UBK2 798 aaKnown RBP13.54□□□□□ -0.24
TOM1-218ENST00000608674 SARDHQ9UL12 918 aa13.54□□□□□ -0.24
TOM1-218ENST00000608674 WASF3Q9UPY6 502 aa13.54□□□□□ -0.24
TOM1-218ENST00000608674 CHD6Q8TD26 2715 aa13.53□□□□□ -0.24
TOM1-218ENST00000608674 H0Y8X5 98 aa13.53□□□□□ -0.24
TOM1-218ENST00000608674 K7ERQ8 282 aa13.53□□□□□ -0.24
TOM1-218ENST00000608674 KPNA3O00505 521 aaPredicted RBP13.53□□□□□ -0.24
TOM1-218ENST00000608674 PLRG1O43660 514 aaKnown RBP13.53□□□□□ -0.24
TOM1-218ENST00000608674 CBFA2T3O75081 653 aa13.53□□□□□ -0.24
TOM1-218ENST00000608674 GJB6O95452 261 aa13.53□□□□□ -0.24
TOM1-218ENST00000608674 PRNPP04156 253 aa13.53□□□□□ -0.24
TOM1-218ENST00000608674 PROS1P07225 676 aa13.53□□□□□ -0.24
TOM1-218ENST00000608674 FTH1P19P0C7X4 201 aa13.53□□□□□ -0.24
TOM1-218ENST00000608674 ATP1A3P13637 1013 aa13.53□□□□□ -0.24
TOM1-218ENST00000608674 FERP16591 822 aa13.53□□□□□ -0.24
TOM1-218ENST00000608674 DESP17661 470 aa13.53□□□□□ -0.24
TOM1-218ENST00000608674 CHRNA3P32297 505 aa13.53□□□□□ -0.24
TOM1-218ENST00000608674 NUDT1P36639 197 aa13.53□□□□□ -0.24
TOM1-218ENST00000608674 ETFBP38117 255 aa13.53□□□□□ -0.24
TOM1-218ENST00000608674 DNA2P51530 1060 aa13.53□□□□□ -0.24
TOM1-218ENST00000608674 GNA12Q03113 381 aa13.53□□□□□ -0.24
TOM1-218ENST00000608674 SLC20A2Q08357 652 aa13.53□□□□□ -0.24
TOM1-218ENST00000608674 INAVAQ3KP66 663 aa13.53□□□□□ -0.24
TOM1-218ENST00000608674 FILIP1LQ4L180 1135 aa13.53□□□□□ -0.24
TOM1-218ENST00000608674 KCNT1Q5JUK3 1230 aa13.53□□□□□ -0.24
TOM1-218ENST00000608674 DNAJC24Q6P3W2 148 aa13.53□□□□□ -0.24
TOM1-218ENST00000608674 PHF13Q86YI8 300 aaPredicted RBP13.53□□□□□ -0.24
TOM1-218ENST00000608674 TMIEQ8NEW7 156 aa13.53□□□□□ -0.24
TOM1-218ENST00000608674 FAM172AQ8WUF8 416 aa13.53□□□□□ -0.24
TOM1-218ENST00000608674 OSBPL2Q9H1P3 480 aa13.53□□□□□ -0.24
TOM1-218ENST00000608674 EBF2Q9HAK2 575 aa13.53□□□□□ -0.24
TOM1-218ENST00000608674 TMEM63CQ9P1W3 806 aa13.53□□□□□ -0.24
TOM1-218ENST00000608674 NEUROG3Q9Y4Z2 214 aa13.53□□□□□ -0.24
TOM1-218ENST00000608674 C1QTNF9BB2RNN3 333 aa13.52□□□□□ -0.25
TOM1-218ENST00000608674 SMAD6O43541 496 aaKnown RBP13.52□□□□□ -0.25
TOM1-218ENST00000608674 PCDHGA12O60330 932 aa13.52□□□□□ -0.25
TOM1-218ENST00000608674 PLEKP08567 350 aaPredicted RBP13.52□□□□□ -0.25
TOM1-218ENST00000608674 C1QTNF9P0C862 333 aa13.52□□□□□ -0.25
TOM1-218ENST00000608674 RHOQP17081 205 aa13.52□□□□□ -0.25
TOM1-218ENST00000608674 GPD1P21695 349 aa13.52□□□□□ -0.25
TOM1-218ENST00000608674 GLDCP23378 1020 aa13.52□□□□□ -0.25
TOM1-218ENST00000608674 MAT2AP31153 395 aaKnown RBP13.52□□□□□ -0.25
TOM1-218ENST00000608674 RFC1P35251 1148 aaPredicted RBP13.52□□□□□ -0.25
TOM1-218ENST00000608674 GRK6P43250 576 aa13.52□□□□□ -0.25
TOM1-218ENST00000608674 GSCP56915 257 aaPredicted RBP13.52□□□□□ -0.25
TOM1-218ENST00000608674 PPP2CBP62714 309 aa13.52□□□□□ -0.25
TOM1-218ENST00000608674 PPP2CAP67775 309 aa13.52□□□□□ -0.25
TOM1-218ENST00000608674 NRG1Q02297 640 aaPredicted RBP13.52□□□□□ -0.25
TOM1-218ENST00000608674 C1QBPQ07021 282 aaKnown RBP13.52□□□□□ -0.25
TOM1-218ENST00000608674 PTP4A2Q12974 167 aa13.52□□□□□ -0.25
TOM1-218ENST00000608674 RAB6CQ53S08 254 aa13.52□□□□□ -0.25
TOM1-218ENST00000608674 AGBL4Q5VU57 503 aa13.52□□□□□ -0.25
TOM1-218ENST00000608674 NAPEPLDQ6IQ20 393 aa13.52□□□□□ -0.25
TOM1-218ENST00000608674 C22orf39Q6P5X5 142 aa13.52□□□□□ -0.25
TOM1-218ENST00000608674 DBX2Q6ZNG2 339 aa13.52□□□□□ -0.25
TOM1-218ENST00000608674 C3orf20Q8ND61 904 aa13.52□□□□□ -0.25
TOM1-218ENST00000608674 OR2A12Q8NGT7 310 aa13.52□□□□□ -0.25
TOM1-218ENST00000608674 CENPIQ92674 756 aaPredicted RBP13.52□□□□□ -0.25
TOM1-218ENST00000608674 TBC1D31Q96DN5 1066 aa13.52□□□□□ -0.25
TOM1-218ENST00000608674 PPP1R16AQ96I34 528 aa13.52□□□□□ -0.25
TOM1-218ENST00000608674 RAB6CQ9H0N0 254 aa13.52□□□□□ -0.25
TOM1-218ENST00000608674 HSD3B7Q9H2F3 369 aa13.52□□□□□ -0.25
TOM1-218ENST00000608674 TNKS2Q9H2K2 1166 aa13.52□□□□□ -0.25
TOM1-218ENST00000608674 RETREG1Q9H6L5 497 aa13.52□□□□□ -0.25
TOM1-218ENST00000608674 PREBQ9HCU5 417 aa13.52□□□□□ -0.25
TOM1-218ENST00000608674 GDF3Q9NR23 364 aa13.52□□□□□ -0.25
TOM1-218ENST00000608674 HPCAL4Q9UM19 191 aa13.52□□□□□ -0.25
TOM1-218ENST00000608674 MSRB2Q9Y3D2 182 aa13.52□□□□□ -0.25
TOM1-218ENST00000608674 ANKRD11Q6UB99 2663 aaPredicted RBP13.51□□□□□ -0.25
TOM1-218ENST00000608674 SIGLEC16A6NMB1 481 aa13.51□□□□□ -0.25
TOM1-218ENST00000608674 GOLGA8CPA6NN73 597 aa13.51□□□□□ -0.25
TOM1-218ENST00000608674 TLR4O00206 839 aa13.51□□□□□ -0.25
TOM1-218ENST00000608674 LATO43561 262 aa13.51□□□□□ -0.25
TOM1-218ENST00000608674 WNT1P04628 370 aa13.51□□□□□ -0.25
TOM1-218ENST00000608674 CTSLP07711 333 aa13.51□□□□□ -0.25
TOM1-218ENST00000608674 TNFAIP3P21580 790 aa13.51□□□□□ -0.25
TOM1-218ENST00000608674 MAPKAPK2P49137 400 aa13.51□□□□□ -0.25
TOM1-218ENST00000608674 ARRB1P49407 418 aaPredicted RBP13.51□□□□□ -0.25
TOM1-218ENST00000608674 SERPINH1P50454 418 aaKnown RBP13.51□□□□□ -0.25
TOM1-218ENST00000608674 HDAC4P56524 1084 aa13.51□□□□□ -0.25
TOM1-218ENST00000608674 IL9RQ01113 521 aa13.51□□□□□ -0.25
TOM1-218ENST00000608674 STAT4Q14765 748 aa13.51□□□□□ -0.25
TOM1-218ENST00000608674 SETMARQ53H47 684 aaPredicted RBP13.51□□□□□ -0.25
TOM1-218ENST00000608674 ARSIQ5FYB1 569 aa13.51□□□□□ -0.25
TOM1-218ENST00000608674 PRAMEF14Q5SWL7 426 aa13.51□□□□□ -0.25
TOM1-218ENST00000608674 PPP1R2P3Q6NXS1 205 aa13.51□□□□□ -0.25
TOM1-218ENST00000608674 CAVIN1Q6NZI2 390 aaKnown RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms