RNA–Protein interactions for RNA: ENST00000602837.1

UBE2E3-211, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

TSL 3

Gene UBE2E3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-211ENST00000602837 PLD2O14939 933 aa7.49□□□□□ -1.21
UBE2E3-211ENST00000602837 PAPSS1O43252 624 aaPredicted RBP7.49□□□□□ -1.21
UBE2E3-211ENST00000602837 GRAP2O75791 330 aa7.49□□□□□ -1.21
UBE2E3-211ENST00000602837 LTFP02788 710 aa7.49□□□□□ -1.21
UBE2E3-211ENST00000602837 ERBB2P04626 1255 aa7.49□□□□□ -1.21
UBE2E3-211ENST00000602837 CCDC172P0C7W6 258 aa7.49□□□□□ -1.21
UBE2E3-211ENST00000602837 PFKLP17858 780 aa7.49□□□□□ -1.21
UBE2E3-211ENST00000602837 RPL10P27635 214 aaKnown RBP7.49□□□□□ -1.21
UBE2E3-211ENST00000602837 IFNAR2P48551 515 aa7.49□□□□□ -1.21
UBE2E3-211ENST00000602837 SEPHS1P49903 392 aa7.49□□□□□ -1.21
UBE2E3-211ENST00000602837 RNASE9P60153 205 aaKnown RBP7.49□□□□□ -1.21
UBE2E3-211ENST00000602837 SLC7A9P82251 487 aa7.49□□□□□ -1.21
UBE2E3-211ENST00000602837 ZXDBP98169 803 aa7.49□□□□□ -1.21
UBE2E3-211ENST00000602837 FMO1Q01740 532 aa7.49□□□□□ -1.21
UBE2E3-211ENST00000602837 CDR2Q01850 454 aa7.49□□□□□ -1.21
UBE2E3-211ENST00000602837 PRKCQQ04759 706 aa7.49□□□□□ -1.21
UBE2E3-211ENST00000602837 GOLGA8FQ08AF8 430 aa7.49□□□□□ -1.21
UBE2E3-211ENST00000602837 GOLGA8DPQ0D2H9 430 aa7.49□□□□□ -1.21
UBE2E3-211ENST00000602837 ZNF268Q14587 947 aaPredicted RBP7.49□□□□□ -1.21
UBE2E3-211ENST00000602837 TAF5Q15542 800 aa7.49□□□□□ -1.21
UBE2E3-211ENST00000602837 PTPN20Q4JDL3 420 aa7.49□□□□□ -1.21
UBE2E3-211ENST00000602837 C2CD6Q53TS8 623 aa7.49□□□□□ -1.21
UBE2E3-211ENST00000602837 SNX30Q5VWJ9 437 aa7.49□□□□□ -1.21
UBE2E3-211ENST00000602837 TRIM68Q6AZZ1 485 aa7.49□□□□□ -1.21
UBE2E3-211ENST00000602837 RNF111Q6ZNA4 994 aa7.49□□□□□ -1.21
UBE2E3-211ENST00000602837 FAM183BPQ6ZVS7 135 aa7.49□□□□□ -1.21
UBE2E3-211ENST00000602837 BHLHA9Q7RTU4 235 aa7.49□□□□□ -1.21
UBE2E3-211ENST00000602837 TMC6Q7Z403 805 aa7.49□□□□□ -1.21
UBE2E3-211ENST00000602837 IRF2BP2Q7Z5L9 587 aa7.49□□□□□ -1.21
UBE2E3-211ENST00000602837 TADA2BQ86TJ2 420 aa7.49□□□□□ -1.21
UBE2E3-211ENST00000602837 TMEM110Q86TL2 294 aa7.49□□□□□ -1.21
UBE2E3-211ENST00000602837 ERICH1Q86X53 443 aa7.49□□□□□ -1.21
UBE2E3-211ENST00000602837 ZNF677Q86XU0 584 aa7.49□□□□□ -1.21
UBE2E3-211ENST00000602837 MIB1Q86YT6 1006 aa7.49□□□□□ -1.21
UBE2E3-211ENST00000602837 SYNPOQ8N3V7 929 aa7.49□□□□□ -1.21
UBE2E3-211ENST00000602837 ZNF397Q8NF99 534 aaPredicted RBP7.49□□□□□ -1.21
UBE2E3-211ENST00000602837 SLC30A5Q8TAD4 765 aa7.49□□□□□ -1.21
UBE2E3-211ENST00000602837 CSGALNACT1Q8TDX6 532 aa7.49□□□□□ -1.21
UBE2E3-211ENST00000602837 IPO4Q8TEX9 1081 aaKnown RBP7.49□□□□□ -1.21
UBE2E3-211ENST00000602837 DEPDC1BQ8WUY9 529 aa7.49□□□□□ -1.21
UBE2E3-211ENST00000602837 WBP2Q969T9 261 aa7.49□□□□□ -1.21
UBE2E3-211ENST00000602837 FAM149B1Q96BN6 582 aa7.49□□□□□ -1.21
UBE2E3-211ENST00000602837 CPXM1Q96SM3 734 aa7.49□□□□□ -1.21
UBE2E3-211ENST00000602837 PCDHB18PQ96TA0 734 aa7.49□□□□□ -1.21
UBE2E3-211ENST00000602837 EDEM3Q9BZQ6 932 aa7.49□□□□□ -1.21
UBE2E3-211ENST00000602837 LINC00597Q9H2U6 94 aa7.49□□□□□ -1.21
UBE2E3-211ENST00000602837 KIF9Q9HAQ2 790 aa7.49□□□□□ -1.21
UBE2E3-211ENST00000602837 DUS2Q9NX74 493 aaKnown RBP7.49□□□□□ -1.21
UBE2E3-211ENST00000602837 OBP2AQ9NY56 170 aa7.49□□□□□ -1.21
UBE2E3-211ENST00000602837 CLIC5Q9NZA1 410 aa7.49□□□□□ -1.21
UBE2E3-211ENST00000602837 MARCH2Q9P0N8 246 aa7.49□□□□□ -1.21
UBE2E3-211ENST00000602837 NDOR1Q9UHB4 597 aa7.49□□□□□ -1.21
UBE2E3-211ENST00000602837 SFMBT1Q9UHJ3 866 aa7.49□□□□□ -1.21
UBE2E3-211ENST00000602837 NOCTQ9UK39 431 aaKnown RBP7.49□□□□□ -1.21
UBE2E3-211ENST00000602837 MYO6Q9UM54 1294 aa7.49□□□□□ -1.21
UBE2E3-211ENST00000602837 ARHGAP26Q9UNA1 814 aa7.49□□□□□ -1.21
UBE2E3-211ENST00000602837 LUC7L2Q9Y383 392 aaKnown RBP7.49□□□□□ -1.21
UBE2E3-211ENST00000602837 SH3BP1Q9Y3L3 701 aa7.49□□□□□ -1.21
UBE2E3-211ENST00000602837 TRAF6Q9Y4K3 522 aa7.49□□□□□ -1.21
UBE2E3-211ENST00000602837 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.49□□□□□ -1.21
UBE2E3-211ENST00000602837 WNT6Q9Y6F9 365 aa7.49□□□□□ -1.21
UBE2E3-211ENST00000602837 XIRP2A4UGR9 3374 aa7.49□□□□□ -1.21
UBE2E3-211ENST00000602837 OBSL1O75147 1896 aa7.49□□□□□ -1.21
UBE2E3-211ENST00000602837 MYO16Q9Y6X6 1858 aa7.49□□□□□ -1.21
UBE2E3-211ENST00000602837 PATJQ8NI35 1801 aa7.48□□□□□ -1.21
UBE2E3-211ENST00000602837 SYNJ2BP-COX16A0A087WUM0 186 aa7.48□□□□□ -1.21
UBE2E3-211ENST00000602837 TMEM221A6NGB7 291 aa7.48□□□□□ -1.21
UBE2E3-211ENST00000602837 TMCO5BA8MYB1 307 aa7.48□□□□□ -1.21
UBE2E3-211ENST00000602837 M0R296 226 aa7.48□□□□□ -1.21
UBE2E3-211ENST00000602837 CAPN9O14815 690 aa7.48□□□□□ -1.21
UBE2E3-211ENST00000602837 CHADO15335 359 aa7.48□□□□□ -1.21
UBE2E3-211ENST00000602837 CPP00450 1065 aa7.48□□□□□ -1.21
UBE2E3-211ENST00000602837 TPM1P09493 284 aa7.48□□□□□ -1.21
UBE2E3-211ENST00000602837 NCAM1P13591 858 aa7.48□□□□□ -1.21
UBE2E3-211ENST00000602837 ARSAP15289 507 aa7.48□□□□□ -1.21
UBE2E3-211ENST00000602837 CASP14P31944 242 aa7.48□□□□□ -1.21
UBE2E3-211ENST00000602837 RPL34P49207 117 aaKnown RBP7.48□□□□□ -1.21
UBE2E3-211ENST00000602837 TUBP50607 506 aa7.48□□□□□ -1.21
UBE2E3-211ENST00000602837 KPNA1P52294 538 aaPredicted RBP7.48□□□□□ -1.21
UBE2E3-211ENST00000602837 SNX16P57768 344 aa7.48□□□□□ -1.21
UBE2E3-211ENST00000602837 NOMO3P69849 1222 aa7.48□□□□□ -1.21
UBE2E3-211ENST00000602837 ZBED6P86452 979 aa7.48□□□□□ -1.21
UBE2E3-211ENST00000602837 SIGLEC14Q08ET2 396 aa7.48□□□□□ -1.21
UBE2E3-211ENST00000602837 KLHL30Q0D2K2 578 aa7.48□□□□□ -1.21
UBE2E3-211ENST00000602837 IKZF1Q13422 519 aa7.48□□□□□ -1.21
UBE2E3-211ENST00000602837 MTF1Q14872 753 aa7.48□□□□□ -1.21
UBE2E3-211ENST00000602837 ZNF77Q15935 545 aa7.48□□□□□ -1.21
UBE2E3-211ENST00000602837 MEA1Q16626 185 aa7.48□□□□□ -1.21
UBE2E3-211ENST00000602837 ARHGAP29Q52LW3 1261 aa7.48□□□□□ -1.21
UBE2E3-211ENST00000602837 SLC44A4Q53GD3 710 aa7.48□□□□□ -1.21
UBE2E3-211ENST00000602837 FIGNQ5HY92 759 aa7.48□□□□□ -1.21
UBE2E3-211ENST00000602837 E4F1Q66K89 784 aaPredicted RBP7.48□□□□□ -1.21
UBE2E3-211ENST00000602837 TRIM72Q6ZMU5 477 aa7.48□□□□□ -1.21
UBE2E3-211ENST00000602837 ZNF574Q6ZN55 896 aaPredicted RBP7.48□□□□□ -1.21
UBE2E3-211ENST00000602837 MMS22LQ6ZRQ5 1243 aa7.48□□□□□ -1.21
UBE2E3-211ENST00000602837 DDX42Q86XP3 938 aaKnown RBP eCLIP7.48□□□□□ -1.21
UBE2E3-211ENST00000602837 FMNL3Q8IVF7 1028 aa7.48□□□□□ -1.21
UBE2E3-211ENST00000602837 VSTM4Q8IW00 320 aa7.48□□□□□ -1.21
UBE2E3-211ENST00000602837 CCDC103Q8IW40 242 aa7.48□□□□□ -1.21
UBE2E3-211ENST00000602837 PPIL6Q8IXY8 311 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms