RNA–Protein interactions for RNA: ENST00000599938.5

ZNF558-206, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 780 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-206ENST00000599938 HDDC3Q8N4P3 179 aa28.8■■■□□ 2.2
ZNF558-206ENST00000599938 AADATQ8N5Z0 425 aa28.8■■■□□ 2.2
ZNF558-206ENST00000599938 FNIP1Q8TF40 1166 aa28.8■■■□□ 2.2
ZNF558-206ENST00000599938 CCDC114Q96M63 670 aa28.8■■■□□ 2.2
ZNF558-206ENST00000599938 MRPL47Q9HD33 250 aaKnown RBP28.8■■■□□ 2.2
ZNF558-206ENST00000599938 EIF2B4Q9UI10 523 aaKnown RBP28.8■■■□□ 2.2
ZNF558-206ENST00000599938 ZBTB32Q9Y2Y4 487 aaPredicted RBP28.8■■■□□ 2.2
ZNF558-206ENST00000599938 CHD5Q8TDI0 1954 aa28.8■■■□□ 2.2
ZNF558-206ENST00000599938 NCOR2Q9Y618 2525 aa28.8■■■□□ 2.2
ZNF558-206ENST00000599938 ADAMTS9Q9P2N4 1935 aa28.79■■■□□ 2.2
ZNF558-206ENST00000599938 FAM47DPA6NHR8 397 aa28.79■■■□□ 2.2
ZNF558-206ENST00000599938 ALOX15BO15296 676 aa28.79■■■□□ 2.2
ZNF558-206ENST00000599938 CREB3O43889 395 aa28.79■■■□□ 2.2
ZNF558-206ENST00000599938 RAMP2O60895 175 aa28.79■■■□□ 2.2
ZNF558-206ENST00000599938 ACVRL1P37023 503 aa28.79■■■□□ 2.2
ZNF558-206ENST00000599938 ATXN3P54252 364 aaPredicted RBP28.79■■■□□ 2.2
ZNF558-206ENST00000599938 SPECC1LQ69YQ0 1117 aa28.79■■■□□ 2.2
ZNF558-206ENST00000599938 C22orf39Q6P5X5 142 aa28.79■■■□□ 2.2
ZNF558-206ENST00000599938 GTPBP2Q9BX10 602 aaKnown RBP28.79■■■□□ 2.2
ZNF558-206ENST00000599938 NEUROG2Q9H2A3 272 aa28.79■■■□□ 2.2
ZNF558-206ENST00000599938 A0A1B0GTW7 788 aa28.78■■■□□ 2.2
ZNF558-206ENST00000599938 C1QTNF3-AMACRE9PGA6 284 aa28.78■■■□□ 2.2
ZNF558-206ENST00000599938 CDX4O14627 284 aaPredicted RBP28.78■■■□□ 2.2
ZNF558-206ENST00000599938 SMAD6O43541 496 aaKnown RBP28.78■■■□□ 2.2
ZNF558-206ENST00000599938 ZMPSTE24O75844 475 aa28.78■■■□□ 2.2
ZNF558-206ENST00000599938 FSBPO95073 299 aa28.78■■■□□ 2.2
ZNF558-206ENST00000599938 GOT1P17174 413 aa28.78■■■□□ 2.2
ZNF558-206ENST00000599938 SERPINH1P50454 418 aaKnown RBP28.78■■■□□ 2.2
ZNF558-206ENST00000599938 ARF5P84085 180 aa28.78■■■□□ 2.2
ZNF558-206ENST00000599938 TRIM14Q14142 442 aa28.78■■■□□ 2.2
ZNF558-206ENST00000599938 FAM46CQ5VWP2 391 aa28.78■■■□□ 2.2
ZNF558-206ENST00000599938 RTL3Q8N8U3 475 aaKnown RBP28.78■■■□□ 2.2
ZNF558-206ENST00000599938 GPATCH2LQ9NWQ4 482 aa28.78■■■□□ 2.2
ZNF558-206ENST00000599938 AP4E1Q9UPM8 1137 aa28.78■■■□□ 2.2
ZNF558-206ENST00000599938 FARP1Q9Y4F1 1045 aaPredicted RBP28.78■■■□□ 2.2
ZNF558-206ENST00000599938 MCF2LO15068 1137 aa28.77■■■□□ 2.2
ZNF558-206ENST00000599938 BCAT2O15382 392 aaPredicted RBP28.77■■■□□ 2.2
ZNF558-206ENST00000599938 RNF8O76064 485 aa28.77■■■□□ 2.2
ZNF558-206ENST00000599938 METAP1P53582 386 aa28.77■■■□□ 2.2
ZNF558-206ENST00000599938 SEMA3BQ13214 749 aa28.77■■■□□ 2.2
ZNF558-206ENST00000599938 DAB2IPQ5VWQ8 1189 aa28.77■■■□□ 2.2
ZNF558-206ENST00000599938 PIP4K2CQ8TBX8 421 aa28.77■■■□□ 2.2
ZNF558-206ENST00000599938 ARHGEF2Q92974 986 aaKnown RBP28.77■■■□□ 2.2
ZNF558-206ENST00000599938 BIRC7Q96CA5 298 aa28.77■■■□□ 2.2
ZNF558-206ENST00000599938 ACE2Q9BYF1 805 aaPredicted RBP28.77■■■□□ 2.2
ZNF558-206ENST00000599938 MAGEH1Q9H213 219 aa28.77■■■□□ 2.2
ZNF558-206ENST00000599938 ARHGAP20Q9P2F6 1191 aa28.77■■■□□ 2.2
ZNF558-206ENST00000599938 SARDHQ9UL12 918 aa28.77■■■□□ 2.2
ZNF558-206ENST00000599938 A0A087X0T9 212 aa28.76■■■□□ 2.19
ZNF558-206ENST00000599938 LRRC72A6NJI9 287 aa28.76■■■□□ 2.19
ZNF558-206ENST00000599938 SYPP08247 313 aa28.76■■■□□ 2.19
ZNF558-206ENST00000599938 FAM228BP0C875 321 aa28.76■■■□□ 2.19
ZNF558-206ENST00000599938 KCNA4P22459 653 aa28.76■■■□□ 2.19
ZNF558-206ENST00000599938 DRD3P35462 400 aa28.76■■■□□ 2.19
ZNF558-206ENST00000599938 ADPRHP54922 357 aa28.76■■■□□ 2.19
ZNF558-206ENST00000599938 TPI1P60174 286 aa28.76■■■□□ 2.19
ZNF558-206ENST00000599938 UAP1L1Q3KQV9 507 aa28.76■■■□□ 2.19
ZNF558-206ENST00000599938 POM121L1PQ3SYA9 428 aa28.76■■■□□ 2.19
ZNF558-206ENST00000599938 KIAA0895LQ68EN5 471 aa28.76■■■□□ 2.19
ZNF558-206ENST00000599938 NCEH1Q6PIU2 408 aa28.76■■■□□ 2.19
ZNF558-206ENST00000599938 OR2A12Q8NGT7 310 aa28.76■■■□□ 2.19
ZNF558-206ENST00000599938 OR2T34Q8NGX1 318 aa28.76■■■□□ 2.19
ZNF558-206ENST00000599938 TNKS2Q9H2K2 1166 aa28.76■■■□□ 2.19
ZNF558-206ENST00000599938 CATSPERBQ9H7T0 1116 aa28.76■■■□□ 2.19
ZNF558-206ENST00000599938 PCSK1NQ9UHG2 260 aa28.76■■■□□ 2.19
ZNF558-206ENST00000599938 PPM1HQ9ULR3 514 aa28.76■■■□□ 2.19
ZNF558-206ENST00000599938 HPCAL4Q9UM19 191 aa28.76■■■□□ 2.19
ZNF558-206ENST00000599938 ASCC3Q8N3C0 2202 aaKnown RBP28.75■■■□□ 2.19
ZNF558-206ENST00000599938 ARHGAP33O14559 1287 aa28.75■■■□□ 2.19
ZNF558-206ENST00000599938 PRPSAP2O60256 369 aa28.75■■■□□ 2.19
ZNF558-206ENST00000599938 MIPP30301 263 aa28.75■■■□□ 2.19
ZNF558-206ENST00000599938 RECQLP46063 649 aaPredicted RBP28.75■■■□□ 2.19
ZNF558-206ENST00000599938 GALCP54803 685 aa28.75■■■□□ 2.19
ZNF558-206ENST00000599938 FOXK2Q01167 660 aa28.75■■■□□ 2.19
ZNF558-206ENST00000599938 SLC20A2Q08357 652 aa28.75■■■□□ 2.19
ZNF558-206ENST00000599938 POLD3Q15054 466 aaPredicted RBP28.75■■■□□ 2.19
ZNF558-206ENST00000599938 ZNF354CQ86Y25 554 aa28.75■■■□□ 2.19
ZNF558-206ENST00000599938 VSTM4Q8IW00 320 aa28.75■■■□□ 2.19
ZNF558-206ENST00000599938 ARFGAP1Q8N6T3 406 aa28.75■■■□□ 2.19
ZNF558-206ENST00000599938 OR14C36Q8NHC7 312 aa28.75■■■□□ 2.19
ZNF558-206ENST00000599938 PEBP4Q96S96 227 aa28.75■■■□□ 2.19
ZNF558-206ENST00000599938 SNRNP25Q9BV90 132 aaKnown RBP28.75■■■□□ 2.19
ZNF558-206ENST00000599938 CEP44Q9C0F1 390 aa28.75■■■□□ 2.19
ZNF558-206ENST00000599938 THAP2Q9H0W7 228 aa28.75■■■□□ 2.19
ZNF558-206ENST00000599938 DHX35Q9H5Z1 703 aaKnown RBP28.75■■■□□ 2.19
ZNF558-206ENST00000599938 TM4SF5O14894 197 aa28.74■■■□□ 2.19
ZNF558-206ENST00000599938 FGF10O15520 208 aaPredicted RBP28.74■■■□□ 2.19
ZNF558-206ENST00000599938 HNRNPH3P31942 346 aaKnown RBP28.74■■■□□ 2.19
ZNF558-206ENST00000599938 HTR7P34969 479 aa28.74■■■□□ 2.19
ZNF558-206ENST00000599938 GEMIN4P57678 1058 aaKnown RBP28.74■■■□□ 2.19
ZNF558-206ENST00000599938 GRIK2Q13002 908 aa28.74■■■□□ 2.19
ZNF558-206ENST00000599938 PPM1JQ5JR12 505 aa28.74■■■□□ 2.19
ZNF558-206ENST00000599938 ALKBH5Q6P6C2 394 aaKnown RBP28.74■■■□□ 2.19
ZNF558-206ENST00000599938 PCDH20Q8N6Y1 951 aaKnown RBP28.74■■■□□ 2.19
ZNF558-206ENST00000599938 FCF1Q9Y324 198 aaKnown RBP28.74■■■□□ 2.19
ZNF558-206ENST00000599938 PLK4O00444 970 aa28.73■■■□□ 2.19
ZNF558-206ENST00000599938 LRCH4O75427 683 aa28.73■■■□□ 2.19
ZNF558-206ENST00000599938 IGHV4-34P06331 123 aa28.73■■■□□ 2.19
ZNF558-206ENST00000599938 CTSLP07711 333 aa28.73■■■□□ 2.19
ZNF558-206ENST00000599938 TPM1P09493 284 aa28.73■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms