RNA–Protein interactions for RNA: ENST00000599689.1

SHD-204, Transcript of Src homology 2 domain containing transforming protein D, humanhuman

TSL 5 BASIC

Gene SHD, Length 1,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHD-204ENST00000599689 TMC7Q7Z402 723 aa23.5■■□□□ 1.35
SHD-204ENST00000599689 RBM23Q86U06 439 aaKnown RBP23.5■■□□□ 1.35
SHD-204ENST00000599689 KLHDC8BQ8IXV7 354 aa23.5■■□□□ 1.35
SHD-204ENST00000599689 ANKRD42Q8N9B4 389 aa23.5■■□□□ 1.35
SHD-204ENST00000599689 IGSF8Q969P0 613 aa23.5■■□□□ 1.35
SHD-204ENST00000599689 CDCA3Q99618 268 aaPredicted RBP23.5■■□□□ 1.35
SHD-204ENST00000599689 NAT9Q9BTE0 207 aa23.5■■□□□ 1.35
SHD-204ENST00000599689 CASS4Q9NQ75 786 aa23.5■■□□□ 1.35
SHD-204ENST00000599689 NKIRAS1Q9NYS0 192 aa23.5■■□□□ 1.35
SHD-204ENST00000599689 TTC28Q96AY4 2481 aa23.5■■□□□ 1.35
SHD-204ENST00000599689 IQANK1A0A1B0GTG1 560 aa23.5■■□□□ 1.35
SHD-204ENST00000599689 PRPF4O43172 522 aaKnown RBP eCLIP23.5■■□□□ 1.35
SHD-204ENST00000599689 CNTN5O94779 1100 aa23.5■■□□□ 1.35
SHD-204ENST00000599689 SLC18A1P54219 525 aa23.5■■□□□ 1.35
SHD-204ENST00000599689 PLPP4Q5VZY2 271 aa23.5■■□□□ 1.35
SHD-204ENST00000599689 CASC4Q6P4E1 433 aa23.5■■□□□ 1.35
SHD-204ENST00000599689 SLC26A11Q86WA9 606 aa23.5■■□□□ 1.35
SHD-204ENST00000599689 GPR65Q8IYL9 337 aa23.5■■□□□ 1.35
SHD-204ENST00000599689 OR52K1Q8NGK4 314 aa23.5■■□□□ 1.35
SHD-204ENST00000599689 MGARPQ8TDB4 240 aa23.5■■□□□ 1.35
SHD-204ENST00000599689 TRMT2BQ96GJ1 504 aaKnown RBP23.5■■□□□ 1.35
SHD-204ENST00000599689 TRIM56Q9BRZ2 755 aaKnown RBP23.5■■□□□ 1.35
SHD-204ENST00000599689 MRPL17Q9NRX2 175 aaKnown RBP23.5■■□□□ 1.35
SHD-204ENST00000599689 BRWD1Q9NSI6 2320 aa23.5■■□□□ 1.35
SHD-204ENST00000599689 TRPM5Q9NZQ8 1165 aa23.5■■□□□ 1.35
SHD-204ENST00000599689 PLXNA4Q9HCM2 1894 aa23.49■■□□□ 1.35
SHD-204ENST00000599689 FAM47DPA6NHR8 397 aa23.49■■□□□ 1.35
SHD-204ENST00000599689 PGAM1P18669 254 aa23.49■■□□□ 1.35
SHD-204ENST00000599689 VEPH1Q14D04 833 aa23.49■■□□□ 1.35
SHD-204ENST00000599689 TAF12Q16514 161 aa23.49■■□□□ 1.35
SHD-204ENST00000599689 NADSYN1Q6IA69 706 aa23.49■■□□□ 1.35
SHD-204ENST00000599689 TFAP2DQ7Z6R9 452 aa23.49■■□□□ 1.35
SHD-204ENST00000599689 LRRC6Q86X45 466 aa23.49■■□□□ 1.35
SHD-204ENST00000599689 CHSY1Q86X52 802 aa23.49■■□□□ 1.35
SHD-204ENST00000599689 CTAGE3PQ8IX95 158 aa23.49■■□□□ 1.35
SHD-204ENST00000599689 PPM1NQ8N819 430 aa23.49■■□□□ 1.35
SHD-204ENST00000599689 ZNF473Q8WTR7 871 aaKnown RBP23.49■■□□□ 1.35
SHD-204ENST00000599689 AUTS2Q8WXX7 1259 aa23.49■■□□□ 1.35
SHD-204ENST00000599689 NACA2Q9H009 215 aa23.49■■□□□ 1.35
SHD-204ENST00000599689 KIF9Q9HAQ2 790 aa23.49■■□□□ 1.35
SHD-204ENST00000599689 SSU72Q9NP77 194 aaKnown RBP23.49■■□□□ 1.35
SHD-204ENST00000599689 PIH1D1Q9NWS0 290 aaKnown RBP23.49■■□□□ 1.35
SHD-204ENST00000599689 SYBUQ9NX95 663 aa23.49■■□□□ 1.35
SHD-204ENST00000599689 MOCS1Q9NZB8 636 aa23.49■■□□□ 1.35
SHD-204ENST00000599689 IPO11Q9UI26 975 aaKnown RBP23.49■■□□□ 1.35
SHD-204ENST00000599689 ZNF180Q9UJW8 692 aa23.49■■□□□ 1.35
SHD-204ENST00000599689 SMG5Q9UPR3 1016 aaKnown RBP23.49■■□□□ 1.35
SHD-204ENST00000599689 ANAPC1Q9H1A4 1944 aa23.49■■□□□ 1.35
SHD-204ENST00000599689 FAM159BA6NKW6 160 aa23.48■■□□□ 1.35
SHD-204ENST00000599689 CXorf49A8MYA2 514 aaPredicted RBP23.48■■□□□ 1.35
SHD-204ENST00000599689 LINC01565O15544 149 aa23.48■■□□□ 1.35
SHD-204ENST00000599689 TACR2P21452 398 aa23.48■■□□□ 1.35
SHD-204ENST00000599689 ELF1P32519 619 aa23.48■■□□□ 1.35
SHD-204ENST00000599689 CRADDP78560 199 aa23.48■■□□□ 1.35
SHD-204ENST00000599689 DLX2Q07687 328 aaPredicted RBP23.48■■□□□ 1.35
SHD-204ENST00000599689 ANO4Q32M45 955 aa23.48■■□□□ 1.35
SHD-204ENST00000599689 PTCRAQ6ISU1 281 aaPredicted RBP23.48■■□□□ 1.35
SHD-204ENST00000599689 TRMT10BQ6PF06 316 aaKnown RBP23.48■■□□□ 1.35
SHD-204ENST00000599689 FOXR1Q6PIV2 292 aa23.48■■□□□ 1.35
SHD-204ENST00000599689 OTOP3Q7RTS5 596 aa23.48■■□□□ 1.35
SHD-204ENST00000599689 CHMP6Q96FZ7 201 aa23.48■■□□□ 1.35
SHD-204ENST00000599689 FCRL5Q96RD9 977 aa23.48■■□□□ 1.35
SHD-204ENST00000599689 LRRC40Q9H9A6 602 aa23.48■■□□□ 1.35
SHD-204ENST00000599689 GLOD4Q9HC38 313 aa23.48■■□□□ 1.35
SHD-204ENST00000599689 SMYD2Q9NRG4 433 aa23.48■■□□□ 1.35
SHD-204ENST00000599689 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.48■■□□□ 1.35
SHD-204ENST00000599689 STK39Q9UEW8 545 aa23.48■■□□□ 1.35
SHD-204ENST00000599689 MAFFQ9ULX9 164 aa23.48■■□□□ 1.35
SHD-204ENST00000599689 GOLGA6L7A0A1B0GV03 622 aa23.47■■□□□ 1.35
SHD-204ENST00000599689 PRRG1O14668 218 aa23.47■■□□□ 1.35
SHD-204ENST00000599689 PER2O15055 1255 aa23.47■■□□□ 1.35
SHD-204ENST00000599689 COCHO43405 550 aa23.47■■□□□ 1.35
SHD-204ENST00000599689 TBX10O75333 385 aa23.47■■□□□ 1.35
SHD-204ENST00000599689 SPAG7O75391 227 aa23.47■■□□□ 1.35
SHD-204ENST00000599689 ALDH1A2O94788 518 aa23.47■■□□□ 1.35
SHD-204ENST00000599689 OLIG2Q13516 323 aa23.47■■□□□ 1.35
SHD-204ENST00000599689 LRRC14Q15048 493 aa23.47■■□□□ 1.35
SHD-204ENST00000599689 DUSP6Q16828 381 aa23.47■■□□□ 1.35
SHD-204ENST00000599689 TCEAL8Q8IYN2 117 aa23.47■■□□□ 1.35
SHD-204ENST00000599689 C4orf33Q8N1A6 199 aa23.47■■□□□ 1.35
SHD-204ENST00000599689 DYDC1Q8WWB3 177 aa23.47■■□□□ 1.35
SHD-204ENST00000599689 FATE1Q969F0 183 aa23.47■■□□□ 1.35
SHD-204ENST00000599689 SGSM3Q96HU1 749 aa23.47■■□□□ 1.35
SHD-204ENST00000599689 RPRD1AQ96P16 312 aaPredicted RBP23.47■■□□□ 1.35
SHD-204ENST00000599689 ZNF317Q96PQ6 595 aaPredicted RBP23.47■■□□□ 1.35
SHD-204ENST00000599689 ZNF212Q9UDV6 495 aa23.47■■□□□ 1.35
SHD-204ENST00000599689 AAR2Q9Y312 384 aaKnown RBP23.47■■□□□ 1.35
SHD-204ENST00000599689 ATG2AQ2TAZ0 1938 aa23.47■■□□□ 1.35
SHD-204ENST00000599689 GRXCR2A6NFK2 248 aa23.47■■□□□ 1.35
SHD-204ENST00000599689 ACSL4O60488 711 aa23.47■■□□□ 1.35
SHD-204ENST00000599689 USP12O75317 370 aa23.47■■□□□ 1.35
SHD-204ENST00000599689 IFNAR2P48551 515 aa23.47■■□□□ 1.35
SHD-204ENST00000599689 CCT5P48643 541 aa23.47■■□□□ 1.35
SHD-204ENST00000599689 TWF1Q12792 350 aa23.47■■□□□ 1.35
SHD-204ENST00000599689 PLD1Q13393 1074 aa23.47■■□□□ 1.35
SHD-204ENST00000599689 MRPL43Q8N983 215 aaKnown RBP23.47■■□□□ 1.35
SHD-204ENST00000599689 HMCESQ96FZ2 354 aa23.47■■□□□ 1.35
SHD-204ENST00000599689 OXNAD1Q96HP4 312 aaPredicted RBP23.47■■□□□ 1.35
SHD-204ENST00000599689 PPP1R2P1Q96PQ5 205 aa23.47■■□□□ 1.35
SHD-204ENST00000599689 RBM22Q9NW64 420 aaKnown RBP eCLIP23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms