RNA–Protein interactions for RNA: ENST00000597304.5

ZNF558-205, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 2,612 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-205ENST00000597304 MPP3Q13368 585 aa12.8□□□□□ -0.36
ZNF558-205ENST00000597304 CLVS1Q8IUQ0 354 aaPredicted RBP12.8□□□□□ -0.36
ZNF558-205ENST00000597304 HERC6Q8IVU3 1022 aa12.8□□□□□ -0.36
ZNF558-205ENST00000597304 TTC39CQ8N584 583 aa12.8□□□□□ -0.36
ZNF558-205ENST00000597304 ANKRD60Q9BZ19 345 aa12.8□□□□□ -0.36
ZNF558-205ENST00000597304 PCDHAC1Q9H158 963 aa12.8□□□□□ -0.36
ZNF558-205ENST00000597304 UTP6Q9NYH9 597 aaKnown RBP12.8□□□□□ -0.36
ZNF558-205ENST00000597304 TNFSF13BQ9Y275 285 aa12.8□□□□□ -0.36
ZNF558-205ENST00000597304 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.8□□□□□ -0.36
ZNF558-205ENST00000597304 USP3Q9Y6I4 520 aa12.8□□□□□ -0.36
ZNF558-205ENST00000597304 KDM4FA0A1W2PPD8 638 aa12.79□□□□□ -0.36
ZNF558-205ENST00000597304 WNT10BO00744 389 aa12.79□□□□□ -0.36
ZNF558-205ENST00000597304 CABYRO75952 493 aa12.79□□□□□ -0.36
ZNF558-205ENST00000597304 STAG3L1P0CL83 205 aa12.79□□□□□ -0.36
ZNF558-205ENST00000597304 MCF2P10911 925 aa12.79□□□□□ -0.36
ZNF558-205ENST00000597304 GLUD2P49448 558 aa12.79□□□□□ -0.36
ZNF558-205ENST00000597304 CSE1LP55060 971 aaKnown RBP12.79□□□□□ -0.36
ZNF558-205ENST00000597304 OLIG2Q13516 323 aa12.79□□□□□ -0.36
ZNF558-205ENST00000597304 ITGA7Q13683 1181 aa12.79□□□□□ -0.36
ZNF558-205ENST00000597304 MAMDC4Q6UXC1 1216 aa12.79□□□□□ -0.36
ZNF558-205ENST00000597304 GK5Q6ZS86 529 aa12.79□□□□□ -0.36
ZNF558-205ENST00000597304 TRIM50Q86XT4 487 aa12.79□□□□□ -0.36
ZNF558-205ENST00000597304 ZDHHC17Q8IUH5 632 aa12.79□□□□□ -0.36
ZNF558-205ENST00000597304 ZNF567Q8N184 647 aa12.79□□□□□ -0.36
ZNF558-205ENST00000597304 PYROXD2Q8N2H3 581 aa12.79□□□□□ -0.36
ZNF558-205ENST00000597304 PCDH20Q8N6Y1 951 aaKnown RBP12.79□□□□□ -0.36
ZNF558-205ENST00000597304 NETO2Q8NC67 525 aa12.79□□□□□ -0.36
ZNF558-205ENST00000597304 CCNYQ8ND76 341 aa12.79□□□□□ -0.36
ZNF558-205ENST00000597304 ISOC1Q96CN7 298 aa12.79□□□□□ -0.36
ZNF558-205ENST00000597304 VPS39Q96JC1 886 aa12.79□□□□□ -0.36
ZNF558-205ENST00000597304 SCYL1Q96KG9 808 aa12.79□□□□□ -0.36
ZNF558-205ENST00000597304 CIB1Q99828 191 aa12.79□□□□□ -0.36
ZNF558-205ENST00000597304 TMEM165Q9HC07 324 aa12.79□□□□□ -0.36
ZNF558-205ENST00000597304 ANLNQ9NQW6 1124 aa12.79□□□□□ -0.36
ZNF558-205ENST00000597304 IPO11Q9UI26 975 aaKnown RBP12.79□□□□□ -0.36
ZNF558-205ENST00000597304 TLK1Q9UKI8 766 aa12.79□□□□□ -0.36
ZNF558-205ENST00000597304 VANGL2Q9ULK5 521 aa12.79□□□□□ -0.36
ZNF558-205ENST00000597304 ANKRD6Q9Y2G4 727 aa12.79□□□□□ -0.36
ZNF558-205ENST00000597304 PCDHGA7Q9Y5G6 932 aa12.79□□□□□ -0.36
ZNF558-205ENST00000597304 SNX9Q9Y5X1 595 aa12.79□□□□□ -0.36
ZNF558-205ENST00000597304 BOLA2-SMG1P6H3BVE0 249 aa12.79□□□□□ -0.36
ZNF558-205ENST00000597304 HTRA2O43464 458 aaPredicted RBP12.79□□□□□ -0.36
ZNF558-205ENST00000597304 CBFA2T3O75081 653 aa12.79□□□□□ -0.36
ZNF558-205ENST00000597304 FAM163BP0C2L3 166 aa12.79□□□□□ -0.36
ZNF558-205ENST00000597304 HSPA1AP0DMV8 641 aaKnown RBP12.79□□□□□ -0.36
ZNF558-205ENST00000597304 HSPA1BP0DMV9 641 aaKnown RBP12.79□□□□□ -0.36
ZNF558-205ENST00000597304 VARSP26640 1264 aaKnown RBP12.79□□□□□ -0.36
ZNF558-205ENST00000597304 PHKA2P46019 1235 aa12.79□□□□□ -0.36
ZNF558-205ENST00000597304 PSMD8P48556 350 aa12.79□□□□□ -0.36
ZNF558-205ENST00000597304 CDH15P55291 814 aa12.79□□□□□ -0.36
ZNF558-205ENST00000597304 BACE1P56817 501 aa12.79□□□□□ -0.36
ZNF558-205ENST00000597304 PKDCCQ504Y2 493 aa12.79□□□□□ -0.36
ZNF558-205ENST00000597304 GLRA4Q5JXX5 417 aa12.79□□□□□ -0.36
ZNF558-205ENST00000597304 ITPRIPL1Q6GPH6 555 aa12.79□□□□□ -0.36
ZNF558-205ENST00000597304 TMEM135Q86UB9 458 aa12.79□□□□□ -0.36
ZNF558-205ENST00000597304 LZTR1Q8N653 840 aa12.79□□□□□ -0.36
ZNF558-205ENST00000597304 FAM47BQ8NA70 645 aa12.79□□□□□ -0.36
ZNF558-205ENST00000597304 CENPIQ92674 756 aaPredicted RBP12.79□□□□□ -0.36
ZNF558-205ENST00000597304 SLC29A1Q99808 456 aa12.79□□□□□ -0.36
ZNF558-205ENST00000597304 C11orf84Q9BUA3 381 aaPredicted RBP12.79□□□□□ -0.36
ZNF558-205ENST00000597304 EFHD1Q9BUP0 239 aa12.79□□□□□ -0.36
ZNF558-205ENST00000597304 BFARQ9NZS9 450 aa12.79□□□□□ -0.36
ZNF558-205ENST00000597304 EBF1Q9UH73 591 aa12.79□□□□□ -0.36
ZNF558-205ENST00000597304 SLC39A10Q9ULF5 831 aa12.79□□□□□ -0.36
ZNF558-205ENST00000597304 EP400Q96L91 3159 aa12.79□□□□□ -0.36
ZNF558-205ENST00000597304 A0A087WXM4 84 aa12.78□□□□□ -0.36
ZNF558-205ENST00000597304 ZCWPW2A0A1B0GU75 182 aa12.78□□□□□ -0.36
ZNF558-205ENST00000597304 HEATR9A2RTY3 570 aa12.78□□□□□ -0.36
ZNF558-205ENST00000597304 KCNU1A8MYU2 1149 aa12.78□□□□□ -0.36
ZNF558-205ENST00000597304 FAM155AB1AL88 458 aaPredicted RBP12.78□□□□□ -0.36
ZNF558-205ENST00000597304 GJB1P08034 283 aa12.78□□□□□ -0.36
ZNF558-205ENST00000597304 PDGFRBP09619 1106 aa12.78□□□□□ -0.36
ZNF558-205ENST00000597304 SLC7A1P30825 629 aa12.78□□□□□ -0.36
ZNF558-205ENST00000597304 ANO4Q32M45 955 aa12.78□□□□□ -0.36
ZNF558-205ENST00000597304 GPR180Q86V85 440 aa12.78□□□□□ -0.36
ZNF558-205ENST00000597304 KCNMB4Q86W47 210 aa12.78□□□□□ -0.36
ZNF558-205ENST00000597304 DNAAF3Q8N9W5 541 aa12.78□□□□□ -0.36
ZNF558-205ENST00000597304 ACVR1CQ8NER5 493 aa12.78□□□□□ -0.36
ZNF558-205ENST00000597304 DNERQ8NFT8 737 aa12.78□□□□□ -0.36
ZNF558-205ENST00000597304 GIPC3Q8TF64 312 aa12.78□□□□□ -0.36
ZNF558-205ENST00000597304 SLC35F5Q8WV83 523 aa12.78□□□□□ -0.36
ZNF558-205ENST00000597304 UNC93B1Q9H1C4 597 aa12.78□□□□□ -0.36
ZNF558-205ENST00000597304 TBC1D23Q9NUY8 699 aa12.78□□□□□ -0.36
ZNF558-205ENST00000597304 TUBA8Q9NY65 449 aaPredicted RBP12.78□□□□□ -0.36
ZNF558-205ENST00000597304 E7ENX8 843 aa12.78□□□□□ -0.36
ZNF558-205ENST00000597304 ZNF701M0R085 212 aaPredicted RBP12.78□□□□□ -0.36
ZNF558-205ENST00000597304 USP12O75317 370 aa12.78□□□□□ -0.36
ZNF558-205ENST00000597304 DDHD2O94830 711 aa12.78□□□□□ -0.36
ZNF558-205ENST00000597304 MAGEA10P43363 369 aaPredicted RBP12.78□□□□□ -0.36
ZNF558-205ENST00000597304 GLRBP48167 497 aa12.78□□□□□ -0.36
ZNF558-205ENST00000597304 TRAP1Q12931 704 aaKnown RBP12.78□□□□□ -0.36
ZNF558-205ENST00000597304 FRG1Q14331 258 aaKnown RBP12.78□□□□□ -0.36
ZNF558-205ENST00000597304 TMEM132DQ14C87 1099 aa12.78□□□□□ -0.36
ZNF558-205ENST00000597304 KCTD21Q4G0X4 260 aa12.78□□□□□ -0.36
ZNF558-205ENST00000597304 ELMSAN1Q6PJG2 1045 aa12.78□□□□□ -0.36
ZNF558-205ENST00000597304 ZBTB49Q6ZSB9 765 aa12.78□□□□□ -0.36
ZNF558-205ENST00000597304 PID1Q7Z2X4 250 aa12.78□□□□□ -0.36
ZNF558-205ENST00000597304 CLEC4CQ8WTT0 213 aa12.78□□□□□ -0.36
ZNF558-205ENST00000597304 SEPT1Q8WYJ6 367 aa12.78□□□□□ -0.36
ZNF558-205ENST00000597304 RSPH1Q8WYR4 309 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms