RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 TBC1D3KA0A087X1G2 549 aa18.34■□□□□ 0.53
CHMP2A-203ENST00000597209 A0A1W2PR77 199 aa18.34■□□□□ 0.53
CHMP2A-203ENST00000597209 TCRBV5S1A1TA0A578 114 aa18.34■□□□□ 0.53
CHMP2A-203ENST00000597209 FAM221BA6H8Z2 402 aa18.34■□□□□ 0.53
CHMP2A-203ENST00000597209 TBC1D3FA6NER0 549 aaPredicted RBP18.34■□□□□ 0.53
CHMP2A-203ENST00000597209 TBC1D3LB9A6J9 549 aa18.34■□□□□ 0.53
CHMP2A-203ENST00000597209 PCDHGA12O60330 932 aa18.34■□□□□ 0.53
CHMP2A-203ENST00000597209 TOP3BO95985 862 aaKnown RBP18.34■□□□□ 0.53
CHMP2A-203ENST00000597209 TBC1D3HP0C7X1 549 aa18.34■□□□□ 0.53
CHMP2A-203ENST00000597209 RHOQP17081 205 aa18.34■□□□□ 0.53
CHMP2A-203ENST00000597209 GPD1P21695 349 aa18.34■□□□□ 0.53
CHMP2A-203ENST00000597209 CHRNA3P32297 505 aa18.34■□□□□ 0.53
CHMP2A-203ENST00000597209 RFC1P35251 1148 aaPredicted RBP18.34■□□□□ 0.53
CHMP2A-203ENST00000597209 METAP1P53582 386 aa18.34■□□□□ 0.53
CHMP2A-203ENST00000597209 HDAC4P56524 1084 aa18.34■□□□□ 0.53
CHMP2A-203ENST00000597209 C21orf59P57076 290 aa18.34■□□□□ 0.53
CHMP2A-203ENST00000597209 GNA12Q03113 381 aa18.34■□□□□ 0.53
CHMP2A-203ENST00000597209 CCDC15Q0P6D6 951 aa18.34■□□□□ 0.53
CHMP2A-203ENST00000597209 ST3GAL2Q16842 350 aa18.34■□□□□ 0.53
CHMP2A-203ENST00000597209 RAB6CQ53S08 254 aa18.34■□□□□ 0.53
CHMP2A-203ENST00000597209 AGBL4Q5VU57 503 aa18.34■□□□□ 0.53
CHMP2A-203ENST00000597209 TBC1D3GQ6DHY5 549 aa18.34■□□□□ 0.53
CHMP2A-203ENST00000597209 TBC1D3CQ6IPX1 549 aa18.34■□□□□ 0.53
CHMP2A-203ENST00000597209 PPP1R2P3Q6NXS1 205 aa18.34■□□□□ 0.53
CHMP2A-203ENST00000597209 WDR59Q6PJI9 974 aa18.34■□□□□ 0.53
CHMP2A-203ENST00000597209 IRF2BP2Q7Z5L9 587 aa18.34■□□□□ 0.53
CHMP2A-203ENST00000597209 TRIM69Q86WT6 500 aa18.34■□□□□ 0.53
CHMP2A-203ENST00000597209 TBC1D3Q8IZP1 549 aaPredicted RBP18.34■□□□□ 0.53
CHMP2A-203ENST00000597209 OR7D4Q8NG98 312 aa18.34■□□□□ 0.53
CHMP2A-203ENST00000597209 SLC6A18Q96N87 628 aa18.34■□□□□ 0.53
CHMP2A-203ENST00000597209 CEP44Q9C0F1 390 aa18.34■□□□□ 0.53
CHMP2A-203ENST00000597209 RAB6CQ9H0N0 254 aa18.34■□□□□ 0.53
CHMP2A-203ENST00000597209 K7ERQ8 282 aa18.33■□□□□ 0.52
CHMP2A-203ENST00000597209 TEX33O43247 280 aa18.33■□□□□ 0.52
CHMP2A-203ENST00000597209 SMAD6O43541 496 aaKnown RBP18.33■□□□□ 0.52
CHMP2A-203ENST00000597209 RTN2O75298 545 aa18.33■□□□□ 0.52
CHMP2A-203ENST00000597209 GJB6O95452 261 aa18.33■□□□□ 0.52
CHMP2A-203ENST00000597209 PRNPP04156 253 aa18.33■□□□□ 0.52
CHMP2A-203ENST00000597209 WNT1P04628 370 aa18.33■□□□□ 0.52
CHMP2A-203ENST00000597209 CTSLP07711 333 aa18.33■□□□□ 0.52
CHMP2A-203ENST00000597209 RRM1P23921 792 aa18.33■□□□□ 0.52
CHMP2A-203ENST00000597209 CD38P28907 300 aa18.33■□□□□ 0.52
CHMP2A-203ENST00000597209 ETFBP38117 255 aa18.33■□□□□ 0.52
CHMP2A-203ENST00000597209 MAPKAPK2P49137 400 aa18.33■□□□□ 0.52
CHMP2A-203ENST00000597209 CCT8P50990 548 aa18.33■□□□□ 0.52
CHMP2A-203ENST00000597209 SCAPQ12770 1279 aa18.33■□□□□ 0.52
CHMP2A-203ENST00000597209 CNTN1Q12860 1018 aa18.33■□□□□ 0.52
CHMP2A-203ENST00000597209 KCNT1Q5JUK3 1230 aa18.33■□□□□ 0.52
CHMP2A-203ENST00000597209 ACAD10Q6JQN1 1059 aa18.33■□□□□ 0.52
CHMP2A-203ENST00000597209 RAB44Q7Z6P3 723 aaPredicted RBP18.33■□□□□ 0.52
CHMP2A-203ENST00000597209 PRPF39Q86UA1 669 aaKnown RBP18.33■□□□□ 0.52
CHMP2A-203ENST00000597209 NLRP14Q86W24 1093 aa18.33■□□□□ 0.52
CHMP2A-203ENST00000597209 SETD7Q8WTS6 366 aaKnown RBP18.33■□□□□ 0.52
CHMP2A-203ENST00000597209 FAM172AQ8WUF8 416 aa18.33■□□□□ 0.52
CHMP2A-203ENST00000597209 SYT11Q9BT88 431 aa18.33■□□□□ 0.52
CHMP2A-203ENST00000597209 SPON2Q9BUD6 331 aa18.33■□□□□ 0.52
CHMP2A-203ENST00000597209 TMEM121BQ9BXQ6 578 aaPredicted RBP18.33■□□□□ 0.52
CHMP2A-203ENST00000597209 PREBQ9HCU5 417 aa18.33■□□□□ 0.52
CHMP2A-203ENST00000597209 ATP13A1Q9HD20 1204 aa18.33■□□□□ 0.52
CHMP2A-203ENST00000597209 TMEM248Q9NWD8 314 aa18.33■□□□□ 0.52
CHMP2A-203ENST00000597209 ARHGAP20Q9P2F6 1191 aa18.33■□□□□ 0.52
CHMP2A-203ENST00000597209 DMTF1Q9Y222 760 aa18.33■□□□□ 0.52
CHMP2A-203ENST00000597209 CHD8Q9HCK8 2581 aa18.32■□□□□ 0.52
CHMP2A-203ENST00000597209 H0Y8X5 98 aa18.32■□□□□ 0.52
CHMP2A-203ENST00000597209 CBX4O00257 560 aa18.32■□□□□ 0.52
CHMP2A-203ENST00000597209 PLK4O00444 970 aa18.32■□□□□ 0.52
CHMP2A-203ENST00000597209 BNIP3LO60238 219 aa18.32■□□□□ 0.52
CHMP2A-203ENST00000597209 PROS1P07225 676 aa18.32■□□□□ 0.52
CHMP2A-203ENST00000597209 PLEKP08567 350 aaPredicted RBP18.32■□□□□ 0.52
CHMP2A-203ENST00000597209 SPINK2P20155 84 aa18.32■□□□□ 0.52
CHMP2A-203ENST00000597209 GLDCP23378 1020 aa18.32■□□□□ 0.52
CHMP2A-203ENST00000597209 SERPINH1P50454 418 aaKnown RBP18.32■□□□□ 0.52
CHMP2A-203ENST00000597209 ZNF143P52747 638 aaPredicted RBP18.32■□□□□ 0.52
CHMP2A-203ENST00000597209 PPP2CBP62714 309 aa18.32■□□□□ 0.52
CHMP2A-203ENST00000597209 PPP2CAP67775 309 aa18.32■□□□□ 0.52
CHMP2A-203ENST00000597209 FILIP1LQ4L180 1135 aa18.32■□□□□ 0.52
CHMP2A-203ENST00000597209 SLC45A4Q5BKX6 768 aa18.32■□□□□ 0.52
CHMP2A-203ENST00000597209 NAPEPLDQ6IQ20 393 aa18.32■□□□□ 0.52
CHMP2A-203ENST00000597209 NEK5Q6P3R8 708 aa18.32■□□□□ 0.52
CHMP2A-203ENST00000597209 C22orf39Q6P5X5 142 aa18.32■□□□□ 0.52
CHMP2A-203ENST00000597209 LAYNQ6UX15 382 aa18.32■□□□□ 0.52
CHMP2A-203ENST00000597209 LINGO4Q6UY18 593 aa18.32■□□□□ 0.52
CHMP2A-203ENST00000597209 PLPP6Q8IY26 295 aa18.32■□□□□ 0.52
CHMP2A-203ENST00000597209 PCDH20Q8N6Y1 951 aaKnown RBP18.32■□□□□ 0.52
CHMP2A-203ENST00000597209 ADAMTS14Q8WXS8 1223 aa18.32■□□□□ 0.52
CHMP2A-203ENST00000597209 BAP1Q92560 729 aa18.32■□□□□ 0.52
CHMP2A-203ENST00000597209 VCPIP1Q96JH7 1222 aa18.32■□□□□ 0.52
CHMP2A-203ENST00000597209 SERAC1Q96JX3 654 aa18.32■□□□□ 0.52
CHMP2A-203ENST00000597209 CDC6Q99741 560 aa18.32■□□□□ 0.52
CHMP2A-203ENST00000597209 AASDHPPTQ9NRN7 309 aa18.32■□□□□ 0.52
CHMP2A-203ENST00000597209 SEPT11Q9NVA2 429 aaKnown RBP18.32■□□□□ 0.52
CHMP2A-203ENST00000597209 NEU3Q9UQ49 428 aa18.32■□□□□ 0.52
CHMP2A-203ENST00000597209 APOBEC2Q9Y235 224 aaKnown RBP18.32■□□□□ 0.52
CHMP2A-203ENST00000597209 MSRB2Q9Y3D2 182 aa18.32■□□□□ 0.52
CHMP2A-203ENST00000597209 TMEM131Q92545 1883 aa18.32■□□□□ 0.52
CHMP2A-203ENST00000597209 A0A1B0GTQ1 180 aa18.31■□□□□ 0.52
CHMP2A-203ENST00000597209 A0A1W2PQC6 194 aa18.31■□□□□ 0.52
CHMP2A-203ENST00000597209 ANKRD62A6NC57 917 aa18.31■□□□□ 0.52
CHMP2A-203ENST00000597209 FAM72CH0Y354 149 aa18.31■□□□□ 0.52
CHMP2A-203ENST00000597209 HYAL3O43820 417 aaPredicted RBP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms