RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 DRC7Q8IY82 874 aa18.15■□□□□ 0.5
SHKBP1-204ENST00000594862 CCDC185Q8N715 623 aa18.15■□□□□ 0.5
SHKBP1-204ENST00000594862 FNIP1Q8TF40 1166 aa18.15■□□□□ 0.5
SHKBP1-204ENST00000594862 SKA1Q96BD8 255 aa18.15■□□□□ 0.5
SHKBP1-204ENST00000594862 BIRC7Q96CA5 298 aa18.15■□□□□ 0.5
SHKBP1-204ENST00000594862 SPON2Q9BUD6 331 aa18.15■□□□□ 0.5
SHKBP1-204ENST00000594862 MAGEH1Q9H213 219 aa18.15■□□□□ 0.5
SHKBP1-204ENST00000594862 DNAAF2Q9NVR5 837 aaKnown RBP18.15■□□□□ 0.5
SHKBP1-204ENST00000594862 HPCAL4Q9UM19 191 aa18.15■□□□□ 0.5
SHKBP1-204ENST00000594862 A0A0D9SEW6 157 aa18.14■□□□□ 0.49
SHKBP1-204ENST00000594862 ZSCAN5CA6NGD5 496 aaPredicted RBP18.14■□□□□ 0.49
SHKBP1-204ENST00000594862 FGF10O15520 208 aaPredicted RBP18.14■□□□□ 0.49
SHKBP1-204ENST00000594862 SNAP91O60641 907 aa18.14■□□□□ 0.49
SHKBP1-204ENST00000594862 RAMP2O60895 175 aa18.14■□□□□ 0.49
SHKBP1-204ENST00000594862 KCNK5O95279 499 aa18.14■□□□□ 0.49
SHKBP1-204ENST00000594862 PRNPP04156 253 aa18.14■□□□□ 0.49
SHKBP1-204ENST00000594862 CEACAM1P13688 526 aa18.14■□□□□ 0.49
SHKBP1-204ENST00000594862 GRIA4P48058 902 aa18.14■□□□□ 0.49
SHKBP1-204ENST00000594862 SERPINH1P50454 418 aaKnown RBP18.14■□□□□ 0.49
SHKBP1-204ENST00000594862 NOVA1P51513 510 aaKnown RBP18.14■□□□□ 0.49
SHKBP1-204ENST00000594862 GALCP54803 685 aa18.14■□□□□ 0.49
SHKBP1-204ENST00000594862 RPL7AP62424 266 aaKnown RBP18.14■□□□□ 0.49
SHKBP1-204ENST00000594862 GRIK2Q13002 908 aa18.14■□□□□ 0.49
SHKBP1-204ENST00000594862 MAMLD1Q13495 774 aa18.14■□□□□ 0.49
SHKBP1-204ENST00000594862 HNRNPDQ14103 355 aaKnown RBP18.14■□□□□ 0.49
SHKBP1-204ENST00000594862 SCYL2Q6P3W7 929 aa18.14■□□□□ 0.49
SHKBP1-204ENST00000594862 C22orf39Q6P5X5 142 aa18.14■□□□□ 0.49
SHKBP1-204ENST00000594862 NLRP14Q86W24 1093 aa18.14■□□□□ 0.49
SHKBP1-204ENST00000594862 AADATQ8N5Z0 425 aa18.14■□□□□ 0.49
SHKBP1-204ENST00000594862 PCDH20Q8N6Y1 951 aaKnown RBP18.14■□□□□ 0.49
SHKBP1-204ENST00000594862 FAM131CQ96AQ9 280 aa18.14■□□□□ 0.49
SHKBP1-204ENST00000594862 NEUROG2Q9H2A3 272 aa18.14■□□□□ 0.49
SHKBP1-204ENST00000594862 CATSPERBQ9H7T0 1116 aa18.14■□□□□ 0.49
SHKBP1-204ENST00000594862 TAS2R14Q9NYV8 317 aa18.14■□□□□ 0.49
SHKBP1-204ENST00000594862 PPM1HQ9ULR3 514 aa18.14■□□□□ 0.49
SHKBP1-204ENST00000594862 LUC7L2Q9Y383 392 aaKnown RBP18.14■□□□□ 0.49
SHKBP1-204ENST00000594862 TMCO5BA8MYB1 307 aa18.13■□□□□ 0.49
SHKBP1-204ENST00000594862 CBFA2T2O43439 604 aa18.13■□□□□ 0.49
SHKBP1-204ENST00000594862 RNF8O76064 485 aa18.13■□□□□ 0.49
SHKBP1-204ENST00000594862 FTLP02792 175 aaPredicted RBP18.13■□□□□ 0.49
SHKBP1-204ENST00000594862 SERPING1P05155 500 aa18.13■□□□□ 0.49
SHKBP1-204ENST00000594862 ZNF883P0CG24 379 aa18.13■□□□□ 0.49
SHKBP1-204ENST00000594862 VAV1P15498 845 aa18.13■□□□□ 0.49
SHKBP1-204ENST00000594862 KCNA4P22459 653 aa18.13■□□□□ 0.49
SHKBP1-204ENST00000594862 PSMA2P25787 234 aa18.13■□□□□ 0.49
SHKBP1-204ENST00000594862 ADPRHP54922 357 aa18.13■□□□□ 0.49
SHKBP1-204ENST00000594862 SEMA3BQ13214 749 aa18.13■□□□□ 0.49
SHKBP1-204ENST00000594862 RAB6CQ53S08 254 aa18.13■□□□□ 0.49
SHKBP1-204ENST00000594862 ARTNQ5T4W7 220 aa18.13■□□□□ 0.49
SHKBP1-204ENST00000594862 E4F1Q66K89 784 aaPredicted RBP18.13■□□□□ 0.49
SHKBP1-204ENST00000594862 TMIEQ8NEW7 156 aa18.13■□□□□ 0.49
SHKBP1-204ENST00000594862 OR7D4Q8NG98 312 aa18.13■□□□□ 0.49
SHKBP1-204ENST00000594862 C1orf216Q8TAB5 229 aa18.13■□□□□ 0.49
SHKBP1-204ENST00000594862 PIP4K2CQ8TBX8 421 aa18.13■□□□□ 0.49
SHKBP1-204ENST00000594862 ZNF653Q96CK0 615 aa18.13■□□□□ 0.49
SHKBP1-204ENST00000594862 PPP1R16AQ96I34 528 aa18.13■□□□□ 0.49
SHKBP1-204ENST00000594862 ACE2Q9BYF1 805 aaPredicted RBP18.13■□□□□ 0.49
SHKBP1-204ENST00000594862 RAB6CQ9H0N0 254 aa18.13■□□□□ 0.49
SHKBP1-204ENST00000594862 DYRK4Q9NR20 520 aa18.13■□□□□ 0.49
SHKBP1-204ENST00000594862 CNOT8Q9UFF9 292 aaKnown RBP18.13■□□□□ 0.49
SHKBP1-204ENST00000594862 SERGEFQ9UGK8 458 aa18.13■□□□□ 0.49
SHKBP1-204ENST00000594862 CAPN11Q9UMQ6 739 aa18.13■□□□□ 0.49
SHKBP1-204ENST00000594862 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.13■□□□□ 0.49
SHKBP1-204ENST00000594862 CACNA1EQ15878 2313 aa18.13■□□□□ 0.49
SHKBP1-204ENST00000594862 A0A1W2PPC4 97 aa18.12■□□□□ 0.49
SHKBP1-204ENST00000594862 FAM47DPA6NHR8 397 aa18.12■□□□□ 0.49
SHKBP1-204ENST00000594862 DDX3XO00571 662 aaKnown RBP eCLIP18.12■□□□□ 0.49
SHKBP1-204ENST00000594862 KRT37O76014 449 aa18.12■□□□□ 0.49
SHKBP1-204ENST00000594862 IGHV4-34P06331 123 aa18.12■□□□□ 0.49
SHKBP1-204ENST00000594862 EPHB2P29323 1055 aa18.12■□□□□ 0.49
SHKBP1-204ENST00000594862 CHRNA3P32297 505 aa18.12■□□□□ 0.49
SHKBP1-204ENST00000594862 NUMBP49757 651 aa18.12■□□□□ 0.49
SHKBP1-204ENST00000594862 ZNF135P52742 658 aaPredicted RBP18.12■□□□□ 0.49
SHKBP1-204ENST00000594862 YBEYP58557 167 aaPredicted RBP18.12■□□□□ 0.49
SHKBP1-204ENST00000594862 RACK1P63244 317 aaKnown RBP18.12■□□□□ 0.49
SHKBP1-204ENST00000594862 TRIM14Q14142 442 aa18.12■□□□□ 0.49
SHKBP1-204ENST00000594862 SLC45A4Q5BKX6 768 aa18.12■□□□□ 0.49
SHKBP1-204ENST00000594862 NCEH1Q6PIU2 408 aa18.12■□□□□ 0.49
SHKBP1-204ENST00000594862 PSTKQ8IV42 348 aaKnown RBP18.12■□□□□ 0.49
SHKBP1-204ENST00000594862 PLPP6Q8IY26 295 aa18.12■□□□□ 0.49
SHKBP1-204ENST00000594862 RTL3Q8N8U3 475 aaKnown RBP18.12■□□□□ 0.49
SHKBP1-204ENST00000594862 OR2A12Q8NGT7 310 aa18.12■□□□□ 0.49
SHKBP1-204ENST00000594862 OR14C36Q8NHC7 312 aa18.12■□□□□ 0.49
SHKBP1-204ENST00000594862 CASKIN2Q8WXE0 1202 aa18.12■□□□□ 0.49
SHKBP1-204ENST00000594862 ISG20Q96AZ6 181 aaKnown RBP18.12■□□□□ 0.49
SHKBP1-204ENST00000594862 ISCUQ9H1K1 167 aa18.12■□□□□ 0.49
SHKBP1-204ENST00000594862 TM9SF3Q9HD45 589 aa18.12■□□□□ 0.49
SHKBP1-204ENST00000594862 IFNKQ9P0W0 207 aa18.12■□□□□ 0.49
SHKBP1-204ENST00000594862 FZD10Q9ULW2 581 aa18.12■□□□□ 0.49
SHKBP1-204ENST00000594862 NEU3Q9UQ49 428 aa18.12■□□□□ 0.49
SHKBP1-204ENST00000594862 CFAP47Q6ZTR5 3102 aa18.12■□□□□ 0.49
SHKBP1-204ENST00000594862 GON4LQ3T8J9 2241 aa18.11■□□□□ 0.49
SHKBP1-204ENST00000594862 TMEM191CA6NGB0 347 aa18.11■□□□□ 0.49
SHKBP1-204ENST00000594862 FAM72CH0Y354 149 aa18.11■□□□□ 0.49
SHKBP1-204ENST00000594862 PLRG1O43660 514 aaKnown RBP18.11■□□□□ 0.49
SHKBP1-204ENST00000594862 BNIP3LO60238 219 aa18.11■□□□□ 0.49
SHKBP1-204ENST00000594862 ZMPSTE24O75844 475 aa18.11■□□□□ 0.49
SHKBP1-204ENST00000594862 MT-CO1P00395 513 aa18.11■□□□□ 0.49
SHKBP1-204ENST00000594862 DRD3P35462 400 aa18.11■□□□□ 0.49
SHKBP1-204ENST00000594862 ACAP1Q15027 740 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms