RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 PTPN9P43378 593 aa24.03■■□□□ 1.44
LSM4-204ENST00000594828 CLCN6P51797 869 aa24.03■■□□□ 1.44
LSM4-204ENST00000594828 UNQ6494/PRO21346Q6UXR6 183 aa24.03■■□□□ 1.44
LSM4-204ENST00000594828 LINGO4Q6UY18 593 aa24.03■■□□□ 1.44
LSM4-204ENST00000594828 STRADAQ7RTN6 431 aa24.03■■□□□ 1.44
LSM4-204ENST00000594828 CHCHD4Q8N4Q1 142 aa24.03■■□□□ 1.44
LSM4-204ENST00000594828 SERAC1Q96JX3 654 aa24.03■■□□□ 1.44
LSM4-204ENST00000594828 AGPAT1Q99943 283 aa24.03■■□□□ 1.44
LSM4-204ENST00000594828 SELENOOQ9BVL4 669 aa24.03■■□□□ 1.44
LSM4-204ENST00000594828 NEUROG3Q9Y4Z2 214 aa24.03■■□□□ 1.44
LSM4-204ENST00000594828 CBX4O00257 560 aa24.02■■□□□ 1.44
LSM4-204ENST00000594828 SMAD6O43541 496 aaKnown RBP24.02■■□□□ 1.44
LSM4-204ENST00000594828 PLRG1O43660 514 aaKnown RBP24.02■■□□□ 1.44
LSM4-204ENST00000594828 DFNA5O60443 496 aa24.02■■□□□ 1.44
LSM4-204ENST00000594828 GLDCP23378 1020 aa24.02■■□□□ 1.44
LSM4-204ENST00000594828 CHRNA3P32297 505 aa24.02■■□□□ 1.44
LSM4-204ENST00000594828 RFC1P35251 1148 aaPredicted RBP24.02■■□□□ 1.44
LSM4-204ENST00000594828 GSCP56915 257 aaPredicted RBP24.02■■□□□ 1.44
LSM4-204ENST00000594828 PPP2CBP62714 309 aa24.02■■□□□ 1.44
LSM4-204ENST00000594828 PPP2CAP67775 309 aa24.02■■□□□ 1.44
LSM4-204ENST00000594828 ANO6Q4KMQ2 910 aa24.02■■□□□ 1.44
LSM4-204ENST00000594828 RETSATQ6NUM9 610 aa24.02■■□□□ 1.44
LSM4-204ENST00000594828 GLRX5Q86SX6 157 aa24.02■■□□□ 1.44
LSM4-204ENST00000594828 PRPF39Q86UA1 669 aaKnown RBP24.02■■□□□ 1.44
LSM4-204ENST00000594828 DRC7Q8IY82 874 aa24.02■■□□□ 1.44
LSM4-204ENST00000594828 OR2A12Q8NGT7 310 aa24.02■■□□□ 1.44
LSM4-204ENST00000594828 CENPIQ92674 756 aaPredicted RBP24.02■■□□□ 1.44
LSM4-204ENST00000594828 OSBPL2Q9H1P3 480 aa24.02■■□□□ 1.44
LSM4-204ENST00000594828 KLK13Q9UKR3 277 aa24.02■■□□□ 1.44
LSM4-204ENST00000594828 PLXNA2O75051 1894 aa24.01■■□□□ 1.43
LSM4-204ENST00000594828 WNT9AO14904 365 aa24.01■■□□□ 1.43
LSM4-204ENST00000594828 LATO43561 262 aa24.01■■□□□ 1.43
LSM4-204ENST00000594828 WNT1P04628 370 aa24.01■■□□□ 1.43
LSM4-204ENST00000594828 CCDC172P0C7W6 258 aa24.01■■□□□ 1.43
LSM4-204ENST00000594828 FTH1P19P0C7X4 201 aa24.01■■□□□ 1.43
LSM4-204ENST00000594828 CCT8P50990 548 aa24.01■■□□□ 1.43
LSM4-204ENST00000594828 NRG1Q02297 640 aaPredicted RBP24.01■■□□□ 1.43
LSM4-204ENST00000594828 GNA12Q03113 381 aa24.01■■□□□ 1.43
LSM4-204ENST00000594828 SLC20A2Q08357 652 aa24.01■■□□□ 1.43
LSM4-204ENST00000594828 AGBL4Q5VU57 503 aa24.01■■□□□ 1.43
LSM4-204ENST00000594828 WDR59Q6PJI9 974 aa24.01■■□□□ 1.43
LSM4-204ENST00000594828 C3orf20Q8ND61 904 aa24.01■■□□□ 1.43
LSM4-204ENST00000594828 TMIEQ8NEW7 156 aa24.01■■□□□ 1.43
LSM4-204ENST00000594828 FAM172AQ8WUF8 416 aa24.01■■□□□ 1.43
LSM4-204ENST00000594828 CDC6Q99741 560 aa24.01■■□□□ 1.43
LSM4-204ENST00000594828 ATP13A1Q9HD20 1204 aa24.01■■□□□ 1.43
LSM4-204ENST00000594828 APOBEC2Q9Y235 224 aaKnown RBP24.01■■□□□ 1.43
LSM4-204ENST00000594828 SIGLEC16A6NMB1 481 aa24■■□□□ 1.43
LSM4-204ENST00000594828 PCDHGA12O60330 932 aa24■■□□□ 1.43
LSM4-204ENST00000594828 CTSLP07711 333 aa24■■□□□ 1.43
LSM4-204ENST00000594828 FERP16591 822 aa24■■□□□ 1.43
LSM4-204ENST00000594828 GPD1P21695 349 aa24■■□□□ 1.43
LSM4-204ENST00000594828 RECQLP46063 649 aaPredicted RBP24■■□□□ 1.43
LSM4-204ENST00000594828 HDAC4P56524 1084 aa24■■□□□ 1.43
LSM4-204ENST00000594828 CCDC15Q0P6D6 951 aa24■■□□□ 1.43
LSM4-204ENST00000594828 SLC45A4Q5BKX6 768 aa24■■□□□ 1.43
LSM4-204ENST00000594828 RWDD4Q6NW29 188 aaKnown RBP24■■□□□ 1.43
LSM4-204ENST00000594828 C22orf39Q6P5X5 142 aa24■■□□□ 1.43
LSM4-204ENST00000594828 RAB44Q7Z6P3 723 aaPredicted RBP24■■□□□ 1.43
LSM4-204ENST00000594828 PNPLA1Q8N8W4 532 aa24■■□□□ 1.43
LSM4-204ENST00000594828 BAHD1Q8TBE0 780 aaPredicted RBP24■■□□□ 1.43
LSM4-204ENST00000594828 ADAMTS14Q8WXS8 1223 aa24■■□□□ 1.43
LSM4-204ENST00000594828 BPIFA3Q9BQP9 254 aa24■■□□□ 1.43
LSM4-204ENST00000594828 TNKS2Q9H2K2 1166 aa24■■□□□ 1.43
LSM4-204ENST00000594828 RETREG1Q9H6L5 497 aa24■■□□□ 1.43
LSM4-204ENST00000594828 ARHGAP20Q9P2F6 1191 aa24■■□□□ 1.43
LSM4-204ENST00000594828 MSRB2Q9Y3D2 182 aa24■■□□□ 1.43
LSM4-204ENST00000594828 A0A1W2PR77 199 aa23.99■■□□□ 1.43
LSM4-204ENST00000594828 SMTNL1A8MU46 457 aa23.99■■□□□ 1.43
LSM4-204ENST00000594828 KPNA3O00505 521 aaPredicted RBP23.99■■□□□ 1.43
LSM4-204ENST00000594828 TEX33O43247 280 aa23.99■■□□□ 1.43
LSM4-204ENST00000594828 ZMPSTE24O75844 475 aa23.99■■□□□ 1.43
LSM4-204ENST00000594828 KRT37O76014 449 aa23.99■■□□□ 1.43
LSM4-204ENST00000594828 PRNPP04156 253 aa23.99■■□□□ 1.43
LSM4-204ENST00000594828 MAT2AP31153 395 aaKnown RBP23.99■■□□□ 1.43
LSM4-204ENST00000594828 NUDT1P36639 197 aa23.99■■□□□ 1.43
LSM4-204ENST00000594828 C1QBPQ07021 282 aaKnown RBP23.99■■□□□ 1.43
LSM4-204ENST00000594828 PRAMEF14Q5SWL7 426 aa23.99■■□□□ 1.43
LSM4-204ENST00000594828 MANEALQ5VSG8 457 aa23.99■■□□□ 1.43
LSM4-204ENST00000594828 MON1BQ7L1V2 547 aa23.99■■□□□ 1.43
LSM4-204ENST00000594828 SLCO6A1Q86UG4 719 aa23.99■■□□□ 1.43
LSM4-204ENST00000594828 TRIM69Q86WT6 500 aa23.99■■□□□ 1.43
LSM4-204ENST00000594828 CCDC185Q8N715 623 aa23.99■■□□□ 1.43
LSM4-204ENST00000594828 CHST14Q8NCH0 376 aa23.99■■□□□ 1.43
LSM4-204ENST00000594828 GATA6Q92908 595 aa23.99■■□□□ 1.43
LSM4-204ENST00000594828 TMEM121BQ9BXQ6 578 aaPredicted RBP23.99■■□□□ 1.43
LSM4-204ENST00000594828 MAGEB5Q9BZ81 275 aa23.99■■□□□ 1.43
LSM4-204ENST00000594828 BTBD3Q9Y2F9 522 aa23.99■■□□□ 1.43
LSM4-204ENST00000594828 DOCK4Q8N1I0 1966 aa23.99■■□□□ 1.43
LSM4-204ENST00000594828 TMEM131Q92545 1883 aa23.98■■□□□ 1.43
LSM4-204ENST00000594828 A0A1B0GTQ1 180 aa23.98■■□□□ 1.43
LSM4-204ENST00000594828 FAM72CH0Y354 149 aa23.98■■□□□ 1.43
LSM4-204ENST00000594828 PLEKP08567 350 aaPredicted RBP23.98■■□□□ 1.43
LSM4-204ENST00000594828 RHOQP17081 205 aa23.98■■□□□ 1.43
LSM4-204ENST00000594828 GRK6P43250 576 aa23.98■■□□□ 1.43
LSM4-204ENST00000594828 SERPINH1P50454 418 aaKnown RBP23.98■■□□□ 1.43
LSM4-204ENST00000594828 ARF5P84085 180 aa23.98■■□□□ 1.43
LSM4-204ENST00000594828 IL9RQ01113 521 aa23.98■■□□□ 1.43
LSM4-204ENST00000594828 ARSIQ5FYB1 569 aa23.98■■□□□ 1.43
LSM4-204ENST00000594828 FAM72AQ5TYM5 149 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms