RNA–Protein interactions for RNA: ENST00000593977.1

LINC00649-204, long intergenic non-protein coding RNA 649, humanhuman

TSL 5 BASIC

Gene LINC00649, Length 640 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-204ENST00000593977 DBR1Q9UK59 544 aaKnown RBP4.41□□□□□ -1.7
LINC00649-204ENST00000593977 SLC5A6Q9Y289 635 aa4.41□□□□□ -1.7
LINC00649-204ENST00000593977 CACNA1FO60840 1977 aa4.41□□□□□ -1.7
LINC00649-204ENST00000593977 UTYO14607 1347 aa4.41□□□□□ -1.7
LINC00649-204ENST00000593977 ZC3H12DA2A288 527 aaKnown RBP4.4□□□□□ -1.71
LINC00649-204ENST00000593977 RGSL1A5PLK6 1076 aa4.4□□□□□ -1.71
LINC00649-204ENST00000593977 MBD3L4A6NDZ8 208 aaPredicted RBP4.4□□□□□ -1.71
LINC00649-204ENST00000593977 FAM90A18PA6NE21 464 aa4.4□□□□□ -1.71
LINC00649-204ENST00000593977 MBD3L3A6NE82 208 aaPredicted RBP4.4□□□□□ -1.71
LINC00649-204ENST00000593977 FAM90A16PA6NEW6 464 aa4.4□□□□□ -1.71
LINC00649-204ENST00000593977 FAM90A9PA6NNJ1 464 aa4.4□□□□□ -1.71
LINC00649-204ENST00000593977 ZNF839A8K0R7 811 aa4.4□□□□□ -1.71
LINC00649-204ENST00000593977 FAM90A5PA8MXJ8 464 aa4.4□□□□□ -1.71
LINC00649-204ENST00000593977 F2RL2O00254 374 aa4.4□□□□□ -1.71
LINC00649-204ENST00000593977 TP73O15350 636 aa4.4□□□□□ -1.71
LINC00649-204ENST00000593977 TGFB1I1O43294 461 aa4.4□□□□□ -1.71
LINC00649-204ENST00000593977 PROM1O43490 865 aa4.4□□□□□ -1.71
LINC00649-204ENST00000593977 KLHL41O60662 606 aa4.4□□□□□ -1.71
LINC00649-204ENST00000593977 CUTAO60888 179 aa4.4□□□□□ -1.71
LINC00649-204ENST00000593977 SMPD2O60906 423 aa4.4□□□□□ -1.71
LINC00649-204ENST00000593977 PPP6R2O75170 966 aa4.4□□□□□ -1.71
LINC00649-204ENST00000593977 TPPPO94811 219 aa4.4□□□□□ -1.71
LINC00649-204ENST00000593977 CSPG5O95196 566 aa4.4□□□□□ -1.71
LINC00649-204ENST00000593977 GLP2RO95838 553 aa4.4□□□□□ -1.71
LINC00649-204ENST00000593977 FTCDO95954 541 aa4.4□□□□□ -1.71
LINC00649-204ENST00000593977 PDGFBP01127 241 aaPredicted RBP4.4□□□□□ -1.71
LINC00649-204ENST00000593977 LMNAP02545 664 aaKnown RBP4.4□□□□□ -1.71
LINC00649-204ENST00000593977 HPXP02790 462 aa4.4□□□□□ -1.71
LINC00649-204ENST00000593977 FAM90A15PP0C7V4 464 aa4.4□□□□□ -1.71
LINC00649-204ENST00000593977 FAM90A14PP0C7W9 464 aa4.4□□□□□ -1.71
LINC00649-204ENST00000593977 FTH1P19P0C7X4 201 aa4.4□□□□□ -1.71
LINC00649-204ENST00000593977 CD8BP10966 210 aa4.4□□□□□ -1.71
LINC00649-204ENST00000593977 BTF3P20290 206 aaKnown RBP4.4□□□□□ -1.71
LINC00649-204ENST00000593977 HOXA11P31270 313 aaPredicted RBP4.4□□□□□ -1.71
LINC00649-204ENST00000593977 RFC1P35251 1148 aaPredicted RBP4.4□□□□□ -1.71
LINC00649-204ENST00000593977 GCLCP48506 637 aaPredicted RBP4.4□□□□□ -1.71
LINC00649-204ENST00000593977 KCNJ5P48544 419 aa4.4□□□□□ -1.71
LINC00649-204ENST00000593977 HSD17B4P51659 736 aa4.4□□□□□ -1.71
LINC00649-204ENST00000593977 RBM5P52756 815 aaKnown RBP eCLIP4.4□□□□□ -1.71
LINC00649-204ENST00000593977 ARFIP1P53367 373 aa4.4□□□□□ -1.71
LINC00649-204ENST00000593977 ZNF200P98182 395 aaPredicted RBP4.4□□□□□ -1.71
LINC00649-204ENST00000593977 YWHAHQ04917 246 aaPredicted RBP4.4□□□□□ -1.71
LINC00649-204ENST00000593977 RAB32Q13637 225 aa4.4□□□□□ -1.71
LINC00649-204ENST00000593977 IRF3Q14653 427 aa4.4□□□□□ -1.71
LINC00649-204ENST00000593977 NFIL3Q16649 462 aa4.4□□□□□ -1.71
LINC00649-204ENST00000593977 C2orf76Q3KRA6 126 aa4.4□□□□□ -1.71
LINC00649-204ENST00000593977 KBTBD12Q3ZCT8 623 aa4.4□□□□□ -1.71
LINC00649-204ENST00000593977 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.4□□□□□ -1.71
LINC00649-204ENST00000593977 MPP7Q5T2T1 576 aa4.4□□□□□ -1.71
LINC00649-204ENST00000593977 EMC10Q5UCC4 262 aa4.4□□□□□ -1.71
LINC00649-204ENST00000593977 DCAF12L1Q5VU92 463 aa4.4□□□□□ -1.71
LINC00649-204ENST00000593977 SLC23A3Q6PIS1 610 aa4.4□□□□□ -1.71
LINC00649-204ENST00000593977 TEPPQ6URK8 271 aa4.4□□□□□ -1.71
LINC00649-204ENST00000593977 OTOP2Q7RTS6 562 aa4.4□□□□□ -1.71
LINC00649-204ENST00000593977 SPRED2Q7Z698 418 aa4.4□□□□□ -1.71
LINC00649-204ENST00000593977 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.4□□□□□ -1.71
LINC00649-204ENST00000593977 MIB1Q86YT6 1006 aa4.4□□□□□ -1.71
LINC00649-204ENST00000593977 LINC00346Q8IVM7 164 aa4.4□□□□□ -1.71
LINC00649-204ENST00000593977 CCDC28AQ8IWP9 274 aa4.4□□□□□ -1.71
LINC00649-204ENST00000593977 RHOT2Q8IXI1 618 aa4.4□□□□□ -1.71
LINC00649-204ENST00000593977 TMEM199Q8N511 208 aa4.4□□□□□ -1.71
LINC00649-204ENST00000593977 FRMD1Q8N878 549 aa4.4□□□□□ -1.71
LINC00649-204ENST00000593977 GPR156Q8NFN8 814 aa4.4□□□□□ -1.71
LINC00649-204ENST00000593977 OR6J1Q8NGC5 347 aa4.4□□□□□ -1.71
LINC00649-204ENST00000593977 IGDCC4Q8TDY8 1250 aa4.4□□□□□ -1.71
LINC00649-204ENST00000593977 SCFD2Q8WU76 684 aa4.4□□□□□ -1.71
LINC00649-204ENST00000593977 TNPO1Q92973 898 aaKnown RBP4.4□□□□□ -1.71
LINC00649-204ENST00000593977 ATP6V0A1Q93050 837 aa4.4□□□□□ -1.71
LINC00649-204ENST00000593977 PERPQ96FX8 193 aa4.4□□□□□ -1.71
LINC00649-204ENST00000593977 VPS39Q96JC1 886 aa4.4□□□□□ -1.71
LINC00649-204ENST00000593977 CNDP1Q96KN2 507 aa4.4□□□□□ -1.71
LINC00649-204ENST00000593977 ABHD1Q96SE0 405 aa4.4□□□□□ -1.71
LINC00649-204ENST00000593977 ZNF341Q9BYN7 854 aa4.4□□□□□ -1.71
LINC00649-204ENST00000593977 KLHL4Q9C0H6 718 aa4.4□□□□□ -1.71
LINC00649-204ENST00000593977 OR10A5Q9H207 317 aa4.4□□□□□ -1.71
LINC00649-204ENST00000593977 C1orf21Q9H246 121 aa4.4□□□□□ -1.71
LINC00649-204ENST00000593977 MTIF3Q9H2K0 278 aaKnown RBP4.4□□□□□ -1.71
LINC00649-204ENST00000593977 NELFAQ9H3P2 528 aa4.4□□□□□ -1.71
LINC00649-204ENST00000593977 RMI1Q9H9A7 625 aa4.4□□□□□ -1.71
LINC00649-204ENST00000593977 HEYLQ9NQ87 328 aaPredicted RBP4.4□□□□□ -1.71
LINC00649-204ENST00000593977 SLC35C2Q9NQQ7 365 aa4.4□□□□□ -1.71
LINC00649-204ENST00000593977 PAPOLBQ9NRJ5 636 aaKnown RBP4.4□□□□□ -1.71
LINC00649-204ENST00000593977 PCDHB16Q9NRJ7 776 aa4.4□□□□□ -1.71
LINC00649-204ENST00000593977 SNTG1Q9NSN8 517 aa4.4□□□□□ -1.71
LINC00649-204ENST00000593977 GALNT8Q9NY28 637 aa4.4□□□□□ -1.71
LINC00649-204ENST00000593977 MRPL15Q9P015 296 aaKnown RBP4.4□□□□□ -1.71
LINC00649-204ENST00000593977 CACNG4Q9UBN1 327 aa4.4□□□□□ -1.71
LINC00649-204ENST00000593977 GPR160Q9UJ42 338 aa4.4□□□□□ -1.71
LINC00649-204ENST00000593977 HPCAL4Q9UM19 191 aa4.4□□□□□ -1.71
LINC00649-204ENST00000593977 ANGPTL3Q9Y5C1 460 aa4.4□□□□□ -1.71
LINC00649-204ENST00000593977 AP1M2Q9Y6Q5 423 aa4.4□□□□□ -1.71
LINC00649-204ENST00000593977 NOTCH2Q04721 2471 aa4.4□□□□□ -1.71
LINC00649-204ENST00000593977 KDM3AQ9Y4C1 1321 aa4.4□□□□□ -1.71
LINC00649-204ENST00000593977 DMXL2Q8TDJ6 3036 aa4.4□□□□□ -1.71
LINC00649-204ENST00000593977 COL4A4P53420 1690 aaPredicted RBP4.39□□□□□ -1.71
LINC00649-204ENST00000593977 A4D1N5 150 aa4.39□□□□□ -1.71
LINC00649-204ENST00000593977 URADA6NGE7 173 aa4.39□□□□□ -1.71
LINC00649-204ENST00000593977 FAM90A20PA6NIJ5 464 aa4.39□□□□□ -1.71
LINC00649-204ENST00000593977 FAM25EA8MYX2 175 aa4.39□□□□□ -1.71
LINC00649-204ENST00000593977 EXOC3O60645 756 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms