RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 ASH1LQ9NR48 2969 aaKnown RBP15.12■□□□□ 0.01
PNKP-202ENST00000593706 RP1P56715 2156 aa15.11■□□□□ 0.01
PNKP-202ENST00000593706 TENM4Q6N022 2769 aa15.11■□□□□ 0.01
PNKP-202ENST00000593706 KPNA3O00505 521 aaPredicted RBP15.11■□□□□ 0.01
PNKP-202ENST00000593706 MCF2LO15068 1137 aa15.11■□□□□ 0.01
PNKP-202ENST00000593706 SLC31A1O15431 190 aa15.11■□□□□ 0.01
PNKP-202ENST00000593706 SIGLEC6O43699 453 aa15.11■□□□□ 0.01
PNKP-202ENST00000593706 RNGTTO60942 597 aaKnown RBP15.11■□□□□ 0.01
PNKP-202ENST00000593706 CLDN11O75508 207 aa15.11■□□□□ 0.01
PNKP-202ENST00000593706 THEGLP0DJG4 465 aa15.11■□□□□ 0.01
PNKP-202ENST00000593706 PRLRP16471 622 aa15.11■□□□□ 0.01
PNKP-202ENST00000593706 EEF1GP26641 437 aaKnown RBP15.11■□□□□ 0.01
PNKP-202ENST00000593706 VASPP50552 380 aaPredicted RBP15.11■□□□□ 0.01
PNKP-202ENST00000593706 KCNMA1Q12791 1236 aa15.11■□□□□ 0.01
PNKP-202ENST00000593706 EIF4EBP2Q13542 120 aaPredicted RBP15.11■□□□□ 0.01
PNKP-202ENST00000593706 RTP5Q14D33 572 aa15.11■□□□□ 0.01
PNKP-202ENST00000593706 TPD52L1Q16890 204 aaPredicted RBP15.11■□□□□ 0.01
PNKP-202ENST00000593706 OR6B2Q6IFH4 312 aa15.11■□□□□ 0.01
PNKP-202ENST00000593706 FAM183BPQ6ZVS7 135 aa15.11■□□□□ 0.01
PNKP-202ENST00000593706 CREBRFQ8IUR6 639 aa15.11■□□□□ 0.01
PNKP-202ENST00000593706 ATP11CQ8NB49 1132 aa15.11■□□□□ 0.01
PNKP-202ENST00000593706 OR52K2Q8NGK3 314 aa15.11■□□□□ 0.01
PNKP-202ENST00000593706 NAA15Q9BXJ9 866 aaKnown RBP15.11■□□□□ 0.01
PNKP-202ENST00000593706 SIK2Q9H0K1 926 aa15.11■□□□□ 0.01
PNKP-202ENST00000593706 PPM1HQ9ULR3 514 aa15.11■□□□□ 0.01
PNKP-202ENST00000593706 HS3ST4Q9Y661 456 aa15.11■□□□□ 0.01
PNKP-202ENST00000593706 ZNF462Q96JM2 2506 aa15.1■□□□□ 0.01
PNKP-202ENST00000593706 A0A1W2PQU0 124 aa15.1■□□□□ 0.01
PNKP-202ENST00000593706 M0QYT0 321 aa15.1■□□□□ 0.01
PNKP-202ENST00000593706 FFAR2O15552 330 aa15.1■□□□□ 0.01
PNKP-202ENST00000593706 BRINP1O60477 761 aa15.1■□□□□ 0.01
PNKP-202ENST00000593706 PAGE1O75459 146 aa15.1■□□□□ 0.01
PNKP-202ENST00000593706 DAB1O75553 588 aa15.1■□□□□ 0.01
PNKP-202ENST00000593706 RHOCP08134 193 aa15.1■□□□□ 0.01
PNKP-202ENST00000593706 SRCP12931 536 aa15.1■□□□□ 0.01
PNKP-202ENST00000593706 ACP1P24666 158 aa15.1■□□□□ 0.01
PNKP-202ENST00000593706 ACTN2P35609 894 aa15.1■□□□□ 0.01
PNKP-202ENST00000593706 CDH4P55283 916 aa15.1■□□□□ 0.01
PNKP-202ENST00000593706 SNX16P57768 344 aa15.1■□□□□ 0.01
PNKP-202ENST00000593706 KRT83P78385 493 aa15.1■□□□□ 0.01
PNKP-202ENST00000593706 INSM1Q01101 510 aaPredicted RBP15.1■□□□□ 0.01
PNKP-202ENST00000593706 CCDC15Q0P6D6 951 aa15.1■□□□□ 0.01
PNKP-202ENST00000593706 PROX2Q3B8N5 592 aa15.1■□□□□ 0.01
PNKP-202ENST00000593706 PIP5KL1Q5T9C9 394 aa15.1■□□□□ 0.01
PNKP-202ENST00000593706 KDM7AQ6ZMT4 941 aa15.1■□□□□ 0.01
PNKP-202ENST00000593706 C11orf57Q6ZUT1 292 aaPredicted RBP15.1■□□□□ 0.01
PNKP-202ENST00000593706 FAM71AQ8IYT1 594 aa15.1■□□□□ 0.01
PNKP-202ENST00000593706 WDTC1Q8N5D0 677 aa15.1■□□□□ 0.01
PNKP-202ENST00000593706 C1orf131Q8NDD1 294 aaKnown RBP15.1■□□□□ 0.01
PNKP-202ENST00000593706 SNIP1Q8TAD8 396 aaKnown RBP15.1■□□□□ 0.01
PNKP-202ENST00000593706 KLK6Q92876 244 aa15.1■□□□□ 0.01
PNKP-202ENST00000593706 ALG14Q96F25 216 aa15.1■□□□□ 0.01
PNKP-202ENST00000593706 C2orf49Q9BVC5 232 aaPredicted RBP15.1■□□□□ 0.01
PNKP-202ENST00000593706 CALN1Q9BXU9 219 aa15.1■□□□□ 0.01
PNKP-202ENST00000593706 FZD3Q9NPG1 666 aa15.1■□□□□ 0.01
PNKP-202ENST00000593706 DNAJC12Q9UKB3 198 aa15.1■□□□□ 0.01
PNKP-202ENST00000593706 HS3ST2Q9Y278 367 aa15.1■□□□□ 0.01
PNKP-202ENST00000593706 LRRK1Q38SD2 2015 aa15.1■□□□□ 0.01
PNKP-202ENST00000593706 FOXN3O00409 490 aaPredicted RBP15.09■□□□□ 0.01
PNKP-202ENST00000593706 TRIM38O00635 465 aa15.09■□□□□ 0.01
PNKP-202ENST00000593706 PRB1P04280 392 aa15.09■□□□□ 0.01
PNKP-202ENST00000593706 PNMA6AP0CW24 399 aaPredicted RBP15.09■□□□□ 0.01
PNKP-202ENST00000593706 PRKCSHP14314 528 aaPredicted RBP15.09■□□□□ 0.01
PNKP-202ENST00000593706 AKT2P31751 481 aa15.09■□□□□ 0.01
PNKP-202ENST00000593706 CLCN1P35523 988 aa15.09■□□□□ 0.01
PNKP-202ENST00000593706 TAS2R38P59533 333 aa15.09■□□□□ 0.01
PNKP-202ENST00000593706 E2F1Q01094 437 aa15.09■□□□□ 0.01
PNKP-202ENST00000593706 ZNF211Q13398 564 aaPredicted RBP15.09■□□□□ 0.01
PNKP-202ENST00000593706 OLFML1Q6UWY5 402 aa15.09■□□□□ 0.01
PNKP-202ENST00000593706 TMEM145Q8NBT3 493 aa15.09■□□□□ 0.01
PNKP-202ENST00000593706 GRIN3AQ8TCU5 1115 aa15.09■□□□□ 0.01
PNKP-202ENST00000593706 RFFLQ8WZ73 363 aa15.09■□□□□ 0.01
PNKP-202ENST00000593706 SLC39A7Q92504 469 aa15.09■□□□□ 0.01
PNKP-202ENST00000593706 FGF11Q92914 225 aa15.09■□□□□ 0.01
PNKP-202ENST00000593706 HSD3B7Q9H2F3 369 aa15.09■□□□□ 0.01
PNKP-202ENST00000593706 PRORYQ9H606 182 aa15.09■□□□□ 0.01
PNKP-202ENST00000593706 PCDHGC3Q9UN70 934 aa15.09■□□□□ 0.01
PNKP-202ENST00000593706 TBC1D30Q9Y2I9 924 aa15.09■□□□□ 0.01
PNKP-202ENST00000593706 OR51B4Q9Y5P0 310 aa15.09■□□□□ 0.01
PNKP-202ENST00000593706 COL27A1Q8IZC6 1860 aaPredicted RBP15.09■□□□□ 0.01
PNKP-202ENST00000593706 ANKRD36A6QL64 1941 aa15.09■□□□□ 0.01
PNKP-202ENST00000593706 COL6A6A6NMZ7 2263 aa15.08■□□□□ 0
PNKP-202ENST00000593706 SNAP91O60641 907 aa15.08■□□□□ 0
PNKP-202ENST00000593706 CNTN5O94779 1100 aa15.08■□□□□ 0
PNKP-202ENST00000593706 PCDH8O95206 1070 aa15.08■□□□□ 0
PNKP-202ENST00000593706 MBD3O95983 291 aa15.08■□□□□ 0
PNKP-202ENST00000593706 PRNPP04156 253 aa15.08■□□□□ 0
PNKP-202ENST00000593706 ERBB2P04626 1255 aa15.08■□□□□ 0
PNKP-202ENST00000593706 CTSLP07711 333 aa15.08■□□□□ 0
PNKP-202ENST00000593706 ALPPL2P10696 532 aa15.08■□□□□ 0
PNKP-202ENST00000593706 HNRNPA2B1P22626 353 aaKnown RBP15.08■□□□□ 0
PNKP-202ENST00000593706 DGKAP23743 735 aa15.08■□□□□ 0
PNKP-202ENST00000593706 RRM1P23921 792 aa15.08■□□□□ 0
PNKP-202ENST00000593706 CHRNA3P32297 505 aa15.08■□□□□ 0
PNKP-202ENST00000593706 NOS2P35228 1153 aa15.08■□□□□ 0
PNKP-202ENST00000593706 KRT9P35527 623 aa15.08■□□□□ 0
PNKP-202ENST00000593706 RECQLP46063 649 aaPredicted RBP15.08■□□□□ 0
PNKP-202ENST00000593706 PTK2Q05397 1052 aa15.08■□□□□ 0
PNKP-202ENST00000593706 C19orf57Q0VDD7 668 aa15.08■□□□□ 0
PNKP-202ENST00000593706 CCDC173Q0VFZ6 552 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms