RNA–Protein interactions for RNA: ENST00000591622.1

CIRBP-233, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-233ENST00000591622 RTL3Q8N8U3 475 aaKnown RBP16.77■□□□□ 0.28
CIRBP-233ENST00000591622 OR2A12Q8NGT7 310 aa16.77■□□□□ 0.28
CIRBP-233ENST00000591622 ARHGEF2Q92974 986 aaKnown RBP16.77■□□□□ 0.28
CIRBP-233ENST00000591622 CCDC114Q96M63 670 aa16.77■□□□□ 0.28
CIRBP-233ENST00000591622 NCAPGQ9BPX3 1015 aa16.77■□□□□ 0.28
CIRBP-233ENST00000591622 NEUROG2Q9H2A3 272 aa16.77■□□□□ 0.28
CIRBP-233ENST00000591622 GPATCH2LQ9NWQ4 482 aa16.77■□□□□ 0.28
CIRBP-233ENST00000591622 SUSD2Q9UGT4 822 aa16.77■□□□□ 0.28
CIRBP-233ENST00000591622 PCSK1NQ9UHG2 260 aa16.77■□□□□ 0.28
CIRBP-233ENST00000591622 PPM1HQ9ULR3 514 aa16.77■□□□□ 0.28
CIRBP-233ENST00000591622 AP4E1Q9UPM8 1137 aa16.77■□□□□ 0.28
CIRBP-233ENST00000591622 LAMA1P25391 3075 aa16.76■□□□□ 0.27
CIRBP-233ENST00000591622 EIF3CLB5ME19 914 aaKnown RBP16.76■□□□□ 0.27
CIRBP-233ENST00000591622 FGF10O15520 208 aaPredicted RBP16.76■□□□□ 0.27
CIRBP-233ENST00000591622 BNIP3LO60238 219 aa16.76■□□□□ 0.27
CIRBP-233ENST00000591622 PRPSAP2O60256 369 aa16.76■□□□□ 0.27
CIRBP-233ENST00000591622 LRCH4O75427 683 aa16.76■□□□□ 0.27
CIRBP-233ENST00000591622 CYP1A2P05177 515 aa16.76■□□□□ 0.27
CIRBP-233ENST00000591622 GOT1P17174 413 aa16.76■□□□□ 0.27
CIRBP-233ENST00000591622 MIPP30301 263 aa16.76■□□□□ 0.27
CIRBP-233ENST00000591622 HTR7P34969 479 aa16.76■□□□□ 0.27
CIRBP-233ENST00000591622 SERPINH1P50454 418 aaKnown RBP16.76■□□□□ 0.27
CIRBP-233ENST00000591622 GFPT1Q06210 699 aaPredicted RBP16.76■□□□□ 0.27
CIRBP-233ENST00000591622 POLD3Q15054 466 aaPredicted RBP16.76■□□□□ 0.27
CIRBP-233ENST00000591622 FAM46CQ5VWP2 391 aa16.76■□□□□ 0.27
CIRBP-233ENST00000591622 SARM1Q6SZW1 724 aa16.76■□□□□ 0.27
CIRBP-233ENST00000591622 HDDC3Q8N4P3 179 aa16.76■□□□□ 0.27
CIRBP-233ENST00000591622 PEBP4Q96S96 227 aa16.76■□□□□ 0.27
CIRBP-233ENST00000591622 EIF3CQ99613 913 aaKnown RBP16.76■□□□□ 0.27
CIRBP-233ENST00000591622 SNRNP25Q9BV90 132 aaKnown RBP16.76■□□□□ 0.27
CIRBP-233ENST00000591622 CEP44Q9C0F1 390 aa16.76■□□□□ 0.27
CIRBP-233ENST00000591622 CATSPERBQ9H7T0 1116 aa16.76■□□□□ 0.27
CIRBP-233ENST00000591622 CAPN10Q9HC96 672 aa16.76■□□□□ 0.27
CIRBP-233ENST00000591622 ZNHIT6Q9NWK9 470 aaKnown RBP16.76■□□□□ 0.27
CIRBP-233ENST00000591622 EIF2B4Q9UI10 523 aaKnown RBP16.76■□□□□ 0.27
CIRBP-233ENST00000591622 SARDHQ9UL12 918 aa16.76■□□□□ 0.27
CIRBP-233ENST00000591622 NENFQ9UMX5 172 aa16.76■□□□□ 0.27
CIRBP-233ENST00000591622 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.76■□□□□ 0.27
CIRBP-233ENST00000591622 FARP1Q9Y4F1 1045 aaPredicted RBP16.76■□□□□ 0.27
CIRBP-233ENST00000591622 DNAH14Q0VDD8 3507 aa16.75■□□□□ 0.27
CIRBP-233ENST00000591622 TNRC6BQ9UPQ9 1833 aaKnown RBP16.75■□□□□ 0.27
CIRBP-233ENST00000591622 SPTBN4Q9H254 2564 aa16.75■□□□□ 0.27
CIRBP-233ENST00000591622 WASH4PA8MWX3 477 aa16.75■□□□□ 0.27
CIRBP-233ENST00000591622 C1QTNF3-AMACRE9PGA6 284 aa16.75■□□□□ 0.27
CIRBP-233ENST00000591622 CDX4O14627 284 aaPredicted RBP16.75■□□□□ 0.27
CIRBP-233ENST00000591622 ZNF821O75541 412 aaPredicted RBP16.75■□□□□ 0.27
CIRBP-233ENST00000591622 CD160O95971 181 aa16.75■□□□□ 0.27
CIRBP-233ENST00000591622 ENGP17813 658 aa16.75■□□□□ 0.27
CIRBP-233ENST00000591622 DRD3P35462 400 aa16.75■□□□□ 0.27
CIRBP-233ENST00000591622 PCK1P35558 622 aa16.75■□□□□ 0.27
CIRBP-233ENST00000591622 METAP1P53582 386 aa16.75■□□□□ 0.27
CIRBP-233ENST00000591622 GALCP54803 685 aa16.75■□□□□ 0.27
CIRBP-233ENST00000591622 GEMIN4P57678 1058 aaKnown RBP16.75■□□□□ 0.27
CIRBP-233ENST00000591622 TPI1P60174 286 aa16.75■□□□□ 0.27
CIRBP-233ENST00000591622 PIGHQ14442 188 aaPredicted RBP16.75■□□□□ 0.27
CIRBP-233ENST00000591622 SLC18A3Q16572 532 aa16.75■□□□□ 0.27
CIRBP-233ENST00000591622 CA9Q16790 459 aa16.75■□□□□ 0.27
CIRBP-233ENST00000591622 TSR1Q2NL82 804 aaKnown RBP16.75■□□□□ 0.27
CIRBP-233ENST00000591622 C22orf39Q6P5X5 142 aa16.75■□□□□ 0.27
CIRBP-233ENST00000591622 CYP4V2Q6ZWL3 525 aaPredicted RBP16.75■□□□□ 0.27
CIRBP-233ENST00000591622 ERMP1Q7Z2K6 904 aa16.75■□□□□ 0.27
CIRBP-233ENST00000591622 DGLUCYQ7Z3D6 616 aa16.75■□□□□ 0.27
CIRBP-233ENST00000591622 PSTKQ8IV42 348 aaKnown RBP16.75■□□□□ 0.27
CIRBP-233ENST00000591622 UMODL1-AS1Q8N2C9 162 aa16.75■□□□□ 0.27
CIRBP-233ENST00000591622 BIRC7Q96CA5 298 aa16.75■□□□□ 0.27
CIRBP-233ENST00000591622 MIR1-1HGQ9H1L0 117 aa16.75■□□□□ 0.27
CIRBP-233ENST00000591622 TNKS2Q9H2K2 1166 aa16.75■□□□□ 0.27
CIRBP-233ENST00000591622 DHX35Q9H5Z1 703 aaKnown RBP16.75■□□□□ 0.27
CIRBP-233ENST00000591622 NOL6Q9H6R4 1146 aaKnown RBP16.75■□□□□ 0.27
CIRBP-233ENST00000591622 TMEM9BQ9NQ34 198 aa16.75■□□□□ 0.27
CIRBP-233ENST00000591622 ABHD10Q9NUJ1 306 aa16.75■□□□□ 0.27
CIRBP-233ENST00000591622 HPCAL4Q9UM19 191 aa16.75■□□□□ 0.27
CIRBP-233ENST00000591622 A0A1B0GTW7 788 aa16.74■□□□□ 0.27
CIRBP-233ENST00000591622 SSU72P8A0A1W2PR75 194 aa16.74■□□□□ 0.27
CIRBP-233ENST00000591622 DCDC2BA2VCK2 349 aa16.74■□□□□ 0.27
CIRBP-233ENST00000591622 FAM47DPA6NHR8 397 aa16.74■□□□□ 0.27
CIRBP-233ENST00000591622 LRRC72A6NJI9 287 aa16.74■□□□□ 0.27
CIRBP-233ENST00000591622 C4orf47A7E2U8 309 aa16.74■□□□□ 0.27
CIRBP-233ENST00000591622 TM4SF5O14894 197 aa16.74■□□□□ 0.27
CIRBP-233ENST00000591622 KDELR3O43731 214 aa16.74■□□□□ 0.27
CIRBP-233ENST00000591622 MFAP3LO75121 409 aa16.74■□□□□ 0.27
CIRBP-233ENST00000591622 FSBPO95073 299 aa16.74■□□□□ 0.27
CIRBP-233ENST00000591622 CHRNA3P32297 505 aa16.74■□□□□ 0.27
CIRBP-233ENST00000591622 RECQLP46063 649 aaPredicted RBP16.74■□□□□ 0.27
CIRBP-233ENST00000591622 ADKP55263 362 aaKnown RBP16.74■□□□□ 0.27
CIRBP-233ENST00000591622 YBEYP58557 167 aaPredicted RBP16.74■□□□□ 0.27
CIRBP-233ENST00000591622 MAPK8IP2Q13387 824 aaPredicted RBP16.74■□□□□ 0.27
CIRBP-233ENST00000591622 ASTE1Q2TB18 679 aaPredicted RBP16.74■□□□□ 0.27
CIRBP-233ENST00000591622 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.74■□□□□ 0.27
CIRBP-233ENST00000591622 ZCCHC9Q8N567 271 aaKnown RBP16.74■□□□□ 0.27
CIRBP-233ENST00000591622 PCDH20Q8N6Y1 951 aaKnown RBP16.74■□□□□ 0.27
CIRBP-233ENST00000591622 TMIEQ8NEW7 156 aa16.74■□□□□ 0.27
CIRBP-233ENST00000591622 OR2T34Q8NGX1 318 aa16.74■□□□□ 0.27
CIRBP-233ENST00000591622 C1orf216Q8TAB5 229 aa16.74■□□□□ 0.27
CIRBP-233ENST00000591622 PIP4K2CQ8TBX8 421 aa16.74■□□□□ 0.27
CIRBP-233ENST00000591622 SNX19Q92543 992 aa16.74■□□□□ 0.27
CIRBP-233ENST00000591622 FAM131CQ96AQ9 280 aa16.74■□□□□ 0.27
CIRBP-233ENST00000591622 ARHGEF26Q96DR7 871 aa16.74■□□□□ 0.27
CIRBP-233ENST00000591622 NUP85Q9BW27 656 aa16.74■□□□□ 0.27
CIRBP-233ENST00000591622 TRIM5Q9C035 493 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 137.4 ms