RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 ATXN7L3BQ96GX2 97 aa17.8■□□□□ 0.44
RETREG3-210ENST00000590541 SRRTQ9BXP5 876 aaKnown RBP17.8■□□□□ 0.44
RETREG3-210ENST00000590541 USP29Q9HBJ7 922 aa17.8■□□□□ 0.44
RETREG3-210ENST00000590541 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.8■□□□□ 0.44
RETREG3-210ENST00000590541 A0A1W2PQU0 124 aa17.79■□□□□ 0.44
RETREG3-210ENST00000590541 PMS2P1A4D2B8 440 aa17.79■□□□□ 0.44
RETREG3-210ENST00000590541 CDRT15L2A8MXV6 281 aa17.79■□□□□ 0.44
RETREG3-210ENST00000590541 RNF225M0QZC1 329 aaPredicted RBP17.79■□□□□ 0.44
RETREG3-210ENST00000590541 ALOX15BO15296 676 aa17.79■□□□□ 0.44
RETREG3-210ENST00000590541 NEBLO76041 1014 aa17.79■□□□□ 0.44
RETREG3-210ENST00000590541 RBMS1P29558 406 aaKnown RBP17.79■□□□□ 0.44
RETREG3-210ENST00000590541 ANP32AP39687 249 aaKnown RBP17.79■□□□□ 0.44
RETREG3-210ENST00000590541 GCNT1Q02742 428 aa17.79■□□□□ 0.44
RETREG3-210ENST00000590541 SRSF1Q07955 248 aaKnown RBP eCLIP17.79■□□□□ 0.44
RETREG3-210ENST00000590541 LRMPQ12912 555 aa17.79■□□□□ 0.44
RETREG3-210ENST00000590541 ZNF284Q2VY69 593 aa17.79■□□□□ 0.44
RETREG3-210ENST00000590541 ACCSLQ4AC99 568 aa17.79■□□□□ 0.44
RETREG3-210ENST00000590541 ZC3H12AQ5D1E8 599 aaKnown RBP17.79■□□□□ 0.44
RETREG3-210ENST00000590541 ZNF542PQ5EBM4 170 aa17.79■□□□□ 0.44
RETREG3-210ENST00000590541 SMYD5Q6GMV2 418 aa17.79■□□□□ 0.44
RETREG3-210ENST00000590541 CXorf57Q6NSI4 855 aaKnown RBP17.79■□□□□ 0.44
RETREG3-210ENST00000590541 TMEM270Q6UE05 265 aa17.79■□□□□ 0.44
RETREG3-210ENST00000590541 CCDC81Q6ZN84 652 aa17.79■□□□□ 0.44
RETREG3-210ENST00000590541 GCNT7Q6ZNI0 430 aa17.79■□□□□ 0.44
RETREG3-210ENST00000590541 Q6ZVU0 165 aa17.79■□□□□ 0.44
RETREG3-210ENST00000590541 EXD3Q8N9H8 876 aa17.79■□□□□ 0.44
RETREG3-210ENST00000590541 IFT43Q96FT9 208 aa17.79■□□□□ 0.44
RETREG3-210ENST00000590541 PRMT1Q99873 361 aaKnown RBP17.79■□□□□ 0.44
RETREG3-210ENST00000590541 DUSP23Q9BVJ7 150 aa17.79■□□□□ 0.44
RETREG3-210ENST00000590541 RWDD2AQ9UIY3 292 aa17.79■□□□□ 0.44
RETREG3-210ENST00000590541 PCDHGA8Q9Y5G5 932 aa17.79■□□□□ 0.44
RETREG3-210ENST00000590541 ENTPD2Q9Y5L3 495 aa17.79■□□□□ 0.44
RETREG3-210ENST00000590541 SPTA1P02549 2419 aa17.78■□□□□ 0.44
RETREG3-210ENST00000590541 NEMP2A6NFY4 417 aa17.78■□□□□ 0.44
RETREG3-210ENST00000590541 F5H5T6 163 aa17.78■□□□□ 0.44
RETREG3-210ENST00000590541 CALCAP01258 141 aa17.78■□□□□ 0.44
RETREG3-210ENST00000590541 APOEP02649 317 aa17.78■□□□□ 0.44
RETREG3-210ENST00000590541 AFPP02771 609 aaKnown RBP17.78■□□□□ 0.44
RETREG3-210ENST00000590541 CTSLP07711 333 aa17.78■□□□□ 0.44
RETREG3-210ENST00000590541 HNRNPA2B1P22626 353 aaKnown RBP17.78■□□□□ 0.44
RETREG3-210ENST00000590541 BRD2P25440 801 aaKnown RBP17.78■□□□□ 0.44
RETREG3-210ENST00000590541 CLDN2P57739 230 aa17.78■□□□□ 0.44
RETREG3-210ENST00000590541 DLG2Q15700 870 aa17.78■□□□□ 0.44
RETREG3-210ENST00000590541 NEK5Q6P3R8 708 aa17.78■□□□□ 0.44
RETREG3-210ENST00000590541 ABI3BPQ7Z7G0 1075 aa17.78■□□□□ 0.44
RETREG3-210ENST00000590541 HORMAD1Q86X24 394 aa17.78■□□□□ 0.44
RETREG3-210ENST00000590541 PPM1KQ8N3J5 372 aa17.78■□□□□ 0.44
RETREG3-210ENST00000590541 MLKLQ8NB16 471 aa17.78■□□□□ 0.44
RETREG3-210ENST00000590541 EHBP1Q8NDI1 1231 aa17.78■□□□□ 0.44
RETREG3-210ENST00000590541 OR52K2Q8NGK3 314 aa17.78■□□□□ 0.44
RETREG3-210ENST00000590541 LMO3Q8TAP4 145 aa17.78■□□□□ 0.44
RETREG3-210ENST00000590541 FAM149B1Q96BN6 582 aa17.78■□□□□ 0.44
RETREG3-210ENST00000590541 CCDC97Q96F63 343 aaPredicted RBP17.78■□□□□ 0.44
RETREG3-210ENST00000590541 BTN2A3PQ96KV6 586 aa17.78■□□□□ 0.44
RETREG3-210ENST00000590541 FAM81BQ96LP2 452 aa17.78■□□□□ 0.44
RETREG3-210ENST00000590541 TRIM4Q9C037 500 aa17.78■□□□□ 0.44
RETREG3-210ENST00000590541 IL17BQ9UHF5 180 aa17.78■□□□□ 0.44
RETREG3-210ENST00000590541 IGLV3-25P01717 112 aa17.77■□□□□ 0.44
RETREG3-210ENST00000590541 ZNF18P17022 549 aa17.77■□□□□ 0.44
RETREG3-210ENST00000590541 AKT2P31751 481 aa17.77■□□□□ 0.44
RETREG3-210ENST00000590541 RPL34P49207 117 aaKnown RBP17.77■□□□□ 0.44
RETREG3-210ENST00000590541 STX17P56962 302 aa17.77■□□□□ 0.44
RETREG3-210ENST00000590541 NFATC3Q12968 1075 aa17.77■□□□□ 0.44
RETREG3-210ENST00000590541 CLN3Q13286 438 aa17.77■□□□□ 0.44
RETREG3-210ENST00000590541 EIF4EBP2Q13542 120 aaPredicted RBP17.77■□□□□ 0.44
RETREG3-210ENST00000590541 CDKN3Q16667 212 aa17.77■□□□□ 0.44
RETREG3-210ENST00000590541 ARL13BQ3SXY8 428 aa17.77■□□□□ 0.44
RETREG3-210ENST00000590541 BEND5Q7L4P6 421 aa17.77■□□□□ 0.44
RETREG3-210ENST00000590541 GRAMD1AQ96CP6 724 aa17.77■□□□□ 0.44
RETREG3-210ENST00000590541 GPR27Q9NS67 375 aa17.77■□□□□ 0.44
RETREG3-210ENST00000590541 EVA1BQ9NVM1 165 aa17.77■□□□□ 0.44
RETREG3-210ENST00000590541 DNAJC28Q9NX36 388 aa17.77■□□□□ 0.44
RETREG3-210ENST00000590541 SLC25A13Q9UJS0 675 aa17.77■□□□□ 0.44
RETREG3-210ENST00000590541 ZFR2Q9UPR6 939 aaKnown RBP17.77■□□□□ 0.44
RETREG3-210ENST00000590541 PCDHB4Q9Y5E5 795 aa17.77■□□□□ 0.44
RETREG3-210ENST00000590541 PIEZO2Q9H5I5 2752 aa17.76■□□□□ 0.43
RETREG3-210ENST00000590541 TCAF2A6NFQ2 919 aa17.76■□□□□ 0.43
RETREG3-210ENST00000590541 KCNU1A8MYU2 1149 aa17.76■□□□□ 0.43
RETREG3-210ENST00000590541 RNF103O00237 685 aa17.76■□□□□ 0.43
RETREG3-210ENST00000590541 EFSO43281 561 aa17.76■□□□□ 0.43
RETREG3-210ENST00000590541 BNIP3LO60238 219 aa17.76■□□□□ 0.43
RETREG3-210ENST00000590541 PRKCSHP14314 528 aaPredicted RBP17.76■□□□□ 0.43
RETREG3-210ENST00000590541 HNRNPKP61978 463 aaKnown RBP eCLIP17.76■□□□□ 0.43
RETREG3-210ENST00000590541 PITX1P78337 314 aaPredicted RBP17.76■□□□□ 0.43
RETREG3-210ENST00000590541 CAMK4Q16566 473 aa17.76■□□□□ 0.43
RETREG3-210ENST00000590541 OR6B2Q6IFH4 312 aa17.76■□□□□ 0.43
RETREG3-210ENST00000590541 ZCCHC8Q6NZY4 707 aaKnown RBP17.76■□□□□ 0.43
RETREG3-210ENST00000590541 GUSBP11Q6P575 273 aa17.76■□□□□ 0.43
RETREG3-210ENST00000590541 Q6ZSR6 202 aa17.76■□□□□ 0.43
RETREG3-210ENST00000590541 ENOSF1Q7L5Y1 443 aa17.76■□□□□ 0.43
RETREG3-210ENST00000590541 CLEC14AQ86T13 490 aa17.76■□□□□ 0.43
RETREG3-210ENST00000590541 SH2D3CQ8N5H7 860 aa17.76■□□□□ 0.43
RETREG3-210ENST00000590541 ZNF548Q8NEK5 533 aaPredicted RBP17.76■□□□□ 0.43
RETREG3-210ENST00000590541 ARRDC3Q96B67 414 aa17.76■□□□□ 0.43
RETREG3-210ENST00000590541 BMFQ96LC9 184 aa17.76■□□□□ 0.43
RETREG3-210ENST00000590541 FEM1AQ9BSK4 669 aa17.76■□□□□ 0.43
RETREG3-210ENST00000590541 OR51B4Q9Y5P0 310 aa17.76■□□□□ 0.43
RETREG3-210ENST00000590541 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.75■□□□□ 0.43
RETREG3-210ENST00000590541 CPED1A4D0V7 1026 aa17.75■□□□□ 0.43
RETREG3-210ENST00000590541 A6NNZ2 444 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms