RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 CNGB3Q9NQW8 809 aa15.44■□□□□ 0.06
CIRBP-228ENST00000590347 PCDHGA7Q9Y5G6 932 aa15.44■□□□□ 0.06
CIRBP-228ENST00000590347 PTPRJQ12913 1337 aa15.44■□□□□ 0.06
CIRBP-228ENST00000590347 ANKRD31Q8N7Z5 1873 aa15.44■□□□□ 0.06
CIRBP-228ENST00000590347 WDR27A2RRH5 827 aa15.43■□□□□ 0.06
CIRBP-228ENST00000590347 CLPXO76031 633 aa15.43■□□□□ 0.06
CIRBP-228ENST00000590347 KCNC4Q03721 635 aa15.43■□□□□ 0.06
CIRBP-228ENST00000590347 OLIG2Q13516 323 aa15.43■□□□□ 0.06
CIRBP-228ENST00000590347 NFIL3Q16649 462 aa15.43■□□□□ 0.06
CIRBP-228ENST00000590347 PAGE2BQ5JRK9 111 aa15.43■□□□□ 0.06
CIRBP-228ENST00000590347 TMEM130Q8N3G9 435 aa15.43■□□□□ 0.06
CIRBP-228ENST00000590347 ZNF577Q9BSK1 485 aa15.43■□□□□ 0.06
CIRBP-228ENST00000590347 PARVBQ9HBI1 364 aa15.43■□□□□ 0.06
CIRBP-228ENST00000590347 AASDHPPTQ9NRN7 309 aa15.43■□□□□ 0.06
CIRBP-228ENST00000590347 PRKCGP05129 697 aa15.43■□□□□ 0.06
CIRBP-228ENST00000590347 DPEP1P16444 411 aa15.43■□□□□ 0.06
CIRBP-228ENST00000590347 ACAT1P24752 427 aaKnown RBP15.43■□□□□ 0.06
CIRBP-228ENST00000590347 PRELPP51888 382 aa15.43■□□□□ 0.06
CIRBP-228ENST00000590347 TUBA4AP68366 448 aa15.43■□□□□ 0.06
CIRBP-228ENST00000590347 NSUN2Q08J23 767 aaKnown RBP eCLIP15.43■□□□□ 0.06
CIRBP-228ENST00000590347 DGKZQ13574 1117 aa15.43■□□□□ 0.06
CIRBP-228ENST00000590347 PPP1R3AQ16821 1122 aa15.43■□□□□ 0.06
CIRBP-228ENST00000590347 WDR45BQ5MNZ6 344 aa15.43■□□□□ 0.06
CIRBP-228ENST00000590347 FAAH2Q6GMR7 532 aa15.43■□□□□ 0.06
CIRBP-228ENST00000590347 DTX3Q8N9I9 347 aa15.43■□□□□ 0.06
CIRBP-228ENST00000590347 TFAP2CQ92754 450 aa15.43■□□□□ 0.06
CIRBP-228ENST00000590347 TRIM39Q9HCM9 518 aa15.43■□□□□ 0.06
CIRBP-228ENST00000590347 WDR6Q9NNW5 1121 aaKnown RBP15.43■□□□□ 0.06
CIRBP-228ENST00000590347 XPNPEP3Q9NQH7 507 aa15.43■□□□□ 0.06
CIRBP-228ENST00000590347 COPG2Q9UBF2 871 aa15.43■□□□□ 0.06
CIRBP-228ENST00000590347 PRORSD1PA6NEY8 169 aa15.43■□□□□ 0.06
CIRBP-228ENST00000590347 C3orf70A6NLC5 250 aaPredicted RBP15.43■□□□□ 0.06
CIRBP-228ENST00000590347 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.43■□□□□ 0.06
CIRBP-228ENST00000590347 GRAP2O75791 330 aa15.43■□□□□ 0.06
CIRBP-228ENST00000590347 NDUFB10O96000 172 aa15.43■□□□□ 0.06
CIRBP-228ENST00000590347 KCNJ11Q14654 390 aa15.43■□□□□ 0.06
CIRBP-228ENST00000590347 EPGNQ6UW88 154 aa15.43■□□□□ 0.06
CIRBP-228ENST00000590347 FBXO11Q86XK2 927 aa15.43■□□□□ 0.06
CIRBP-228ENST00000590347 SPATA6LQ8N4H0 392 aa15.43■□□□□ 0.06
CIRBP-228ENST00000590347 LILRB4Q8NHJ6 448 aa15.43■□□□□ 0.06
CIRBP-228ENST00000590347 HM13Q8TCT9 377 aa15.43■□□□□ 0.06
CIRBP-228ENST00000590347 CRYGNQ8WXF5 182 aa15.43■□□□□ 0.06
CIRBP-228ENST00000590347 SLC45A3Q96JT2 553 aa15.43■□□□□ 0.06
CIRBP-228ENST00000590347 ANKRD60Q9BZ19 345 aa15.43■□□□□ 0.06
CIRBP-228ENST00000590347 ADNPQ9H2P0 1102 aa15.43■□□□□ 0.06
CIRBP-228ENST00000590347 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.43■□□□□ 0.069e-7■□□□□ 10.7
CIRBP-228ENST00000590347 SEL1LQ9UBV2 794 aa15.43■□□□□ 0.06
CIRBP-228ENST00000590347 EXOC7Q9UPT5 735 aa15.43■□□□□ 0.06
CIRBP-228ENST00000590347 UGT2A1Q9Y4X1 527 aa15.43■□□□□ 0.06
CIRBP-228ENST00000590347 IGLV3-22A0A075B6J6 115 aa15.42■□□□□ 0.06
CIRBP-228ENST00000590347 C9IYK1 514 aa15.42■□□□□ 0.06
CIRBP-228ENST00000590347 MSI1O43347 362 aaKnown RBP15.42■□□□□ 0.06
CIRBP-228ENST00000590347 MFN2O95140 757 aa15.42■□□□□ 0.06
CIRBP-228ENST00000590347 GARTP22102 1010 aa15.42■□□□□ 0.06
CIRBP-228ENST00000590347 SREBF1P36956 1147 aa15.42■□□□□ 0.06
CIRBP-228ENST00000590347 ARPP19P56211 112 aa15.42■□□□□ 0.06
CIRBP-228ENST00000590347 GALNT2Q10471 571 aa15.42■□□□□ 0.06
CIRBP-228ENST00000590347 WDR44Q5JSH3 913 aa15.42■□□□□ 0.06
CIRBP-228ENST00000590347 TMEM236Q5W0B7 351 aa15.42■□□□□ 0.06
CIRBP-228ENST00000590347 SNX19Q92543 992 aa15.42■□□□□ 0.06
CIRBP-228ENST00000590347 ABCB10Q9NRK6 738 aa15.42■□□□□ 0.06
CIRBP-228ENST00000590347 SCHIP1Q9P0W5 487 aaPredicted RBP15.42■□□□□ 0.06
CIRBP-228ENST00000590347 SLX4Q8IY92 1834 aa15.42■□□□□ 0.06
CIRBP-228ENST00000590347 HNRNPDLO14979 420 aaKnown RBP15.42■□□□□ 0.06
CIRBP-228ENST00000590347 LRCH4O75427 683 aa15.42■□□□□ 0.06
CIRBP-228ENST00000590347 ERVK-10P10266 1014 aa15.42■□□□□ 0.06
CIRBP-228ENST00000590347 KDELR1P24390 212 aa15.42■□□□□ 0.06
CIRBP-228ENST00000590347 DCKP27707 260 aa15.42■□□□□ 0.06
CIRBP-228ENST00000590347 PSME3P61289 254 aa15.42■□□□□ 0.06
CIRBP-228ENST00000590347 AQP6Q13520 282 aa15.42■□□□□ 0.06
CIRBP-228ENST00000590347 MAPRE1Q15691 268 aaKnown RBP15.42■□□□□ 0.06
CIRBP-228ENST00000590347 RPS27LQ71UM5 84 aaKnown RBP15.42■□□□□ 0.06
CIRBP-228ENST00000590347 MMAAQ8IVH4 418 aaKnown RBP15.42■□□□□ 0.06
CIRBP-228ENST00000590347 CNDP1Q96KN2 507 aa15.42■□□□□ 0.06
CIRBP-228ENST00000590347 BEGAINQ9BUH8 593 aa15.42■□□□□ 0.06
CIRBP-228ENST00000590347 GLIS2Q9BZE0 524 aaPredicted RBP15.42■□□□□ 0.06
CIRBP-228ENST00000590347 TMEM206Q9H813 350 aa15.42■□□□□ 0.06
CIRBP-228ENST00000590347 CCDC167Q9P0B6 97 aa15.42■□□□□ 0.06
CIRBP-228ENST00000590347 PRPF19Q9UMS4 504 aaKnown RBP15.42■□□□□ 0.06
CIRBP-228ENST00000590347 UBE4BO95155 1302 aa15.42■□□□□ 0.06
CIRBP-228ENST00000590347 DLGAP1O14490 977 aa15.41■□□□□ 0.06
CIRBP-228ENST00000590347 PSMD10O75832 226 aa15.41■□□□□ 0.06
CIRBP-228ENST00000590347 PHC1P78364 1004 aa15.41■□□□□ 0.06
CIRBP-228ENST00000590347 SP4Q02446 784 aa15.41■□□□□ 0.06
CIRBP-228ENST00000590347 CREB5Q02930 508 aa15.41■□□□□ 0.06
CIRBP-228ENST00000590347 POLD3Q15054 466 aaPredicted RBP15.41■□□□□ 0.06
CIRBP-228ENST00000590347 GLRA4Q5JXX5 417 aa15.41■□□□□ 0.06
CIRBP-228ENST00000590347 IQSEC1Q6DN90 963 aa15.41■□□□□ 0.06
CIRBP-228ENST00000590347 ZNF606Q8WXB4 792 aa15.41■□□□□ 0.06
CIRBP-228ENST00000590347 OAZ3Q9UMX2 235 aa15.41■□□□□ 0.06
CIRBP-228ENST00000590347 SNX9Q9Y5X1 595 aa15.41■□□□□ 0.06
CIRBP-228ENST00000590347 H0Y858 1186 aa15.41■□□□□ 0.06
CIRBP-228ENST00000590347 SYNCRIPO60506 623 aaKnown RBP15.41■□□□□ 0.06
CIRBP-228ENST00000590347 OTUD3Q5T2D3 398 aaPredicted RBP15.41■□□□□ 0.06
CIRBP-228ENST00000590347 PSMA8Q8TAA3 256 aa15.41■□□□□ 0.06
CIRBP-228ENST00000590347 MAGEE2Q8TD90 523 aaPredicted RBP15.41■□□□□ 0.06
CIRBP-228ENST00000590347 SH3YL1Q96HL8 342 aaPredicted RBP15.41■□□□□ 0.06
CIRBP-228ENST00000590347 LHPPQ9H008 270 aa15.41■□□□□ 0.06
CIRBP-228ENST00000590347 COQ3Q9NZJ6 369 aa15.41■□□□□ 0.06
CIRBP-228ENST00000590347 FAM189A1O60320 539 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms