RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 BIRC7Q96CA5 298 aa12.36□□□□□ -0.43
TPM4-212ENST00000590180 TRIM11Q96F44 468 aa12.36□□□□□ -0.43
TPM4-212ENST00000590180 CCDC114Q96M63 670 aa12.36□□□□□ -0.43
TPM4-212ENST00000590180 RETREG1Q9H6L5 497 aa12.36□□□□□ -0.43
TPM4-212ENST00000590180 CAPN10Q9HC96 672 aa12.36□□□□□ -0.43
TPM4-212ENST00000590180 MRPL47Q9HD33 250 aaKnown RBP12.36□□□□□ -0.43
TPM4-212ENST00000590180 NDFIP2Q9NV92 336 aa12.36□□□□□ -0.43
TPM4-212ENST00000590180 TMEM248Q9NWD8 314 aa12.36□□□□□ -0.43
TPM4-212ENST00000590180 ZNF212Q9UDV6 495 aa12.36□□□□□ -0.43
TPM4-212ENST00000590180 PCSK1NQ9UHG2 260 aa12.36□□□□□ -0.43
TPM4-212ENST00000590180 FZD10Q9ULW2 581 aa12.36□□□□□ -0.43
TPM4-212ENST00000590180 HPCAL4Q9UM19 191 aa12.36□□□□□ -0.43
TPM4-212ENST00000590180 HS3ST2Q9Y278 367 aa12.36□□□□□ -0.43
TPM4-212ENST00000590180 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.36□□□□□ -0.43
TPM4-212ENST00000590180 PLXND1Q9Y4D7 1925 aa12.36□□□□□ -0.43
TPM4-212ENST00000590180 NCOR2Q9Y618 2525 aa12.36□□□□□ -0.43
TPM4-212ENST00000590180 CACNA1AO00555 2505 aa12.35□□□□□ -0.43
TPM4-212ENST00000590180 TBC1D3DA0A087WVF3 549 aa12.35□□□□□ -0.43
TPM4-212ENST00000590180 TBC1D3IA0A087WXS9 549 aa12.35□□□□□ -0.43
TPM4-212ENST00000590180 TBC1D3EA0A087X179 549 aa12.35□□□□□ -0.43
TPM4-212ENST00000590180 TBC1D3KA0A087X1G2 549 aa12.35□□□□□ -0.43
TPM4-212ENST00000590180 MED19A0JLT2 244 aaPredicted RBP12.35□□□□□ -0.43
TPM4-212ENST00000590180 TBC1D3FA6NER0 549 aaPredicted RBP12.35□□□□□ -0.43
TPM4-212ENST00000590180 TBC1D3LB9A6J9 549 aa12.35□□□□□ -0.43
TPM4-212ENST00000590180 C1QTNF3-AMACRE9PGA6 284 aa12.35□□□□□ -0.43
TPM4-212ENST00000590180 PLK4O00444 970 aa12.35□□□□□ -0.43
TPM4-212ENST00000590180 TM4SF5O14894 197 aa12.35□□□□□ -0.43
TPM4-212ENST00000590180 OPHN1O60890 802 aa12.35□□□□□ -0.43
TPM4-212ENST00000590180 RAMP2O60895 175 aa12.35□□□□□ -0.43
TPM4-212ENST00000590180 TBC1D3HP0C7X1 549 aa12.35□□□□□ -0.43
TPM4-212ENST00000590180 MYBL1P10243 752 aa12.35□□□□□ -0.43
TPM4-212ENST00000590180 CHRNA3P32297 505 aa12.35□□□□□ -0.43
TPM4-212ENST00000590180 ETFBP38117 255 aa12.35□□□□□ -0.43
TPM4-212ENST00000590180 CLCN6P51797 869 aa12.35□□□□□ -0.43
TPM4-212ENST00000590180 AIF1P55008 147 aa12.35□□□□□ -0.43
TPM4-212ENST00000590180 SCAPQ12770 1279 aa12.35□□□□□ -0.43
TPM4-212ENST00000590180 POLD3Q15054 466 aaPredicted RBP12.35□□□□□ -0.43
TPM4-212ENST00000590180 MANEALQ5VSG8 457 aa12.35□□□□□ -0.43
TPM4-212ENST00000590180 HGSNATQ68CP4 663 aa12.35□□□□□ -0.43
TPM4-212ENST00000590180 KIAA0895LQ68EN5 471 aa12.35□□□□□ -0.43
TPM4-212ENST00000590180 TBC1D3GQ6DHY5 549 aa12.35□□□□□ -0.43
TPM4-212ENST00000590180 TBC1D3CQ6IPX1 549 aa12.35□□□□□ -0.43
TPM4-212ENST00000590180 NCEH1Q6PIU2 408 aa12.35□□□□□ -0.43
TPM4-212ENST00000590180 NLRP14Q86W24 1093 aa12.35□□□□□ -0.43
TPM4-212ENST00000590180 TBC1D3Q8IZP1 549 aaPredicted RBP12.35□□□□□ -0.43
TPM4-212ENST00000590180 AADATQ8N5Z0 425 aa12.35□□□□□ -0.43
TPM4-212ENST00000590180 OR2I1PQ8NGU4 316 aa12.35□□□□□ -0.43
TPM4-212ENST00000590180 OR2T34Q8NGX1 318 aa12.35□□□□□ -0.43
TPM4-212ENST00000590180 ARHGEF2Q92974 986 aaKnown RBP12.35□□□□□ -0.43
TPM4-212ENST00000590180 EPAS1Q99814 870 aa12.35□□□□□ -0.43
TPM4-212ENST00000590180 ISCUQ9H1K1 167 aa12.35□□□□□ -0.43
TPM4-212ENST00000590180 MAGEH1Q9H213 219 aa12.35□□□□□ -0.43
TPM4-212ENST00000590180 TNKS2Q9H2K2 1166 aa12.35□□□□□ -0.43
TPM4-212ENST00000590180 CATSPERBQ9H7T0 1116 aa12.35□□□□□ -0.43
TPM4-212ENST00000590180 GPATCH2LQ9NWQ4 482 aa12.35□□□□□ -0.43
TPM4-212ENST00000590180 SARDHQ9UL12 918 aa12.35□□□□□ -0.43
TPM4-212ENST00000590180 PPM1HQ9ULR3 514 aa12.35□□□□□ -0.43
TPM4-212ENST00000590180 FZD4Q9ULV1 537 aa12.35□□□□□ -0.43
TPM4-212ENST00000590180 SCINQ9Y6U3 715 aa12.35□□□□□ -0.43
TPM4-212ENST00000590180 ASCC3Q8N3C0 2202 aaKnown RBP12.35□□□□□ -0.43
TPM4-212ENST00000590180 KPNA3O00505 521 aaPredicted RBP12.34□□□□□ -0.43
TPM4-212ENST00000590180 ALOX15BO15296 676 aa12.34□□□□□ -0.43
TPM4-212ENST00000590180 DAPK3O43293 454 aa12.34□□□□□ -0.43
TPM4-212ENST00000590180 PRPSAP2O60256 369 aa12.34□□□□□ -0.43
TPM4-212ENST00000590180 ZMPSTE24O75844 475 aa12.34□□□□□ -0.43
TPM4-212ENST00000590180 GYPCP04921 128 aa12.34□□□□□ -0.43
TPM4-212ENST00000590180 CD27P26842 260 aa12.34□□□□□ -0.43
TPM4-212ENST00000590180 CSNK1EP49674 416 aaKnown RBP12.34□□□□□ -0.43
TPM4-212ENST00000590180 METAP1P53582 386 aa12.34□□□□□ -0.43
TPM4-212ENST00000590180 TEAD4Q15561 434 aa12.34□□□□□ -0.43
TPM4-212ENST00000590180 TSR1Q2NL82 804 aaKnown RBP12.34□□□□□ -0.43
TPM4-212ENST00000590180 ARSIQ5FYB1 569 aa12.34□□□□□ -0.43
TPM4-212ENST00000590180 CCDC122Q5T0U0 273 aa12.34□□□□□ -0.43
TPM4-212ENST00000590180 ERMARDQ5T6L9 678 aa12.34□□□□□ -0.43
TPM4-212ENST00000590180 LEKR1Q6ZMV7 388 aa12.34□□□□□ -0.43
TPM4-212ENST00000590180 RYBPQ8N488 228 aaPredicted RBP12.34□□□□□ -0.43
TPM4-212ENST00000590180 MINDY1Q8N5J2 469 aa12.34□□□□□ -0.43
TPM4-212ENST00000590180 CHST14Q8NCH0 376 aa12.34□□□□□ -0.43
TPM4-212ENST00000590180 OR2A12Q8NGT7 310 aa12.34□□□□□ -0.43
TPM4-212ENST00000590180 ACE2Q9BYF1 805 aaPredicted RBP12.34□□□□□ -0.43
TPM4-212ENST00000590180 TRIM7Q9C029 511 aa12.34□□□□□ -0.43
TPM4-212ENST00000590180 DHX35Q9H5Z1 703 aaKnown RBP12.34□□□□□ -0.43
TPM4-212ENST00000590180 DYRK4Q9NR20 520 aa12.34□□□□□ -0.43
TPM4-212ENST00000590180 FCF1Q9Y324 198 aaKnown RBP12.34□□□□□ -0.43
TPM4-212ENST00000590180 ACTL7AQ9Y615 435 aa12.34□□□□□ -0.43
TPM4-212ENST00000590180 DMXL1Q9Y485 3027 aa12.33□□□□□ -0.44
TPM4-212ENST00000590180 A0A087X0T9 212 aa12.33□□□□□ -0.44
TPM4-212ENST00000590180 A0A1B0GVT2 93 aa12.33□□□□□ -0.44
TPM4-212ENST00000590180 BUB1O43683 1085 aa12.33□□□□□ -0.44
TPM4-212ENST00000590180 KDELR3O43731 214 aa12.33□□□□□ -0.44
TPM4-212ENST00000590180 KCNK5O95279 499 aa12.33□□□□□ -0.44
TPM4-212ENST00000590180 PRNPP04156 253 aa12.33□□□□□ -0.44
TPM4-212ENST00000590180 TPM1P09493 284 aa12.33□□□□□ -0.44
TPM4-212ENST00000590180 FAM228BP0C875 321 aa12.33□□□□□ -0.44
TPM4-212ENST00000590180 MIPP30301 263 aa12.33□□□□□ -0.44
TPM4-212ENST00000590180 SERPINH1P50454 418 aaKnown RBP12.33□□□□□ -0.44
TPM4-212ENST00000590180 NOVA1P51513 510 aaKnown RBP12.33□□□□□ -0.44
TPM4-212ENST00000590180 AFF3P51826 1226 aaKnown RBP12.33□□□□□ -0.44
TPM4-212ENST00000590180 TPI1P60174 286 aa12.33□□□□□ -0.44
TPM4-212ENST00000590180 ARF5P84085 180 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms