RNA–Protein interactions for RNA: ENST00000589937.5

RFX1-207, Transcript of regulatory factor X1, humanhuman

TSL 4

Gene RFX1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-207ENST00000589937 SOX5P35711 763 aa12.98□□□□□ -0.33
RFX1-207ENST00000589937 CCR5P51681 352 aa12.98□□□□□ -0.33
RFX1-207ENST00000589937 C21orf59P57076 290 aa12.98□□□□□ -0.33
RFX1-207ENST00000589937 SNX16P57768 344 aa12.98□□□□□ -0.33
RFX1-207ENST00000589937 CDR2Q01850 454 aa12.98□□□□□ -0.33
RFX1-207ENST00000589937 PTP4A2Q12974 167 aa12.98□□□□□ -0.33
RFX1-207ENST00000589937 PIP5KL1Q5T9C9 394 aa12.98□□□□□ -0.33
RFX1-207ENST00000589937 FAM72AQ5TYM5 149 aa12.98□□□□□ -0.33
RFX1-207ENST00000589937 TBC1D3GQ6DHY5 549 aa12.98□□□□□ -0.33
RFX1-207ENST00000589937 TBC1D3CQ6IPX1 549 aa12.98□□□□□ -0.33
RFX1-207ENST00000589937 FAM72DQ6L9T8 149 aa12.98□□□□□ -0.33
RFX1-207ENST00000589937 C22orf39Q6P5X5 142 aa12.98□□□□□ -0.33
RFX1-207ENST00000589937 DBX2Q6ZNG2 339 aa12.98□□□□□ -0.33
RFX1-207ENST00000589937 APTXQ7Z2E3 356 aaKnown RBP12.98□□□□□ -0.33
RFX1-207ENST00000589937 GLRX5Q86SX6 157 aa12.98□□□□□ -0.33
RFX1-207ENST00000589937 FAM72BQ86X60 149 aa12.98□□□□□ -0.33
RFX1-207ENST00000589937 SPATS2Q86XZ4 545 aaKnown RBP12.98□□□□□ -0.33
RFX1-207ENST00000589937 DRC7Q8IY82 874 aa12.98□□□□□ -0.33
RFX1-207ENST00000589937 TBC1D3Q8IZP1 549 aaPredicted RBP12.98□□□□□ -0.33
RFX1-207ENST00000589937 KDF1Q8NAX2 398 aaPredicted RBP12.98□□□□□ -0.33
RFX1-207ENST00000589937 ATP11CQ8NB49 1132 aa12.98□□□□□ -0.33
RFX1-207ENST00000589937 OR2A12Q8NGT7 310 aa12.98□□□□□ -0.33
RFX1-207ENST00000589937 ADAMTS14Q8WXS8 1223 aa12.98□□□□□ -0.33
RFX1-207ENST00000589937 FZD3Q9NPG1 666 aa12.98□□□□□ -0.33
RFX1-207ENST00000589937 NDFIP2Q9NV92 336 aa12.98□□□□□ -0.33
RFX1-207ENST00000589937 RRN3Q9NYV6 651 aa12.98□□□□□ -0.33
RFX1-207ENST00000589937 ARHGAP20Q9P2F6 1191 aa12.98□□□□□ -0.33
RFX1-207ENST00000589937 HS3ST2Q9Y278 367 aa12.98□□□□□ -0.33
RFX1-207ENST00000589937 PCDHGB2Q9Y5G2 931 aa12.98□□□□□ -0.33
RFX1-207ENST00000589937 ACACAQ13085 2346 aa12.97□□□□□ -0.33
RFX1-207ENST00000589937 A0A1B0GTQ1 180 aa12.97□□□□□ -0.33
RFX1-207ENST00000589937 FAM149AA5PLN7 773 aa12.97□□□□□ -0.33
RFX1-207ENST00000589937 SRRM3A6NNA2 597 aaPredicted RBP12.97□□□□□ -0.33
RFX1-207ENST00000589937 DRGXA6NNA5 263 aa12.97□□□□□ -0.33
RFX1-207ENST00000589937 LGALS16A8MUM7 142 aa12.97□□□□□ -0.33
RFX1-207ENST00000589937 KPNA3O00505 521 aaPredicted RBP12.97□□□□□ -0.33
RFX1-207ENST00000589937 ZNF821O75541 412 aaPredicted RBP12.97□□□□□ -0.33
RFX1-207ENST00000589937 ATP1A3P13637 1013 aa12.97□□□□□ -0.33
RFX1-207ENST00000589937 MMP8P22894 467 aa12.97□□□□□ -0.33
RFX1-207ENST00000589937 CD38P28907 300 aa12.97□□□□□ -0.33
RFX1-207ENST00000589937 OR1E1P30953 314 aa12.97□□□□□ -0.33
RFX1-207ENST00000589937 ACVRL1P37023 503 aa12.97□□□□□ -0.33
RFX1-207ENST00000589937 NNMTP40261 264 aa12.97□□□□□ -0.33
RFX1-207ENST00000589937 OXCT1P55809 520 aa12.97□□□□□ -0.33
RFX1-207ENST00000589937 NCAPHQ15003 741 aa12.97□□□□□ -0.33
RFX1-207ENST00000589937 CCDC14Q49A88 953 aa12.97□□□□□ -0.33
RFX1-207ENST00000589937 LEKR1Q6ZMV7 388 aa12.97□□□□□ -0.33
RFX1-207ENST00000589937 CCDC185Q8N715 623 aa12.97□□□□□ -0.33
RFX1-207ENST00000589937 DCAF4L2Q8NA75 395 aa12.97□□□□□ -0.33
RFX1-207ENST00000589937 RXFP2Q8WXD0 754 aa12.97□□□□□ -0.33
RFX1-207ENST00000589937 ADAMTS20P59510 1910 aa12.97□□□□□ -0.33
RFX1-207ENST00000589937 C2CD4BA6NLJ0 364 aa12.96□□□□□ -0.33
RFX1-207ENST00000589937 TAF4O00268 1085 aa12.96□□□□□ -0.33
RFX1-207ENST00000589937 MCF2LO15068 1137 aa12.96□□□□□ -0.33
RFX1-207ENST00000589937 ZMPSTE24O75844 475 aa12.96□□□□□ -0.33
RFX1-207ENST00000589937 TRIM16O95361 564 aa12.96□□□□□ -0.33
RFX1-207ENST00000589937 CAPNS1P04632 268 aa12.96□□□□□ -0.33
RFX1-207ENST00000589937 GRK6P43250 576 aa12.96□□□□□ -0.33
RFX1-207ENST00000589937 VASPP50552 380 aaPredicted RBP12.96□□□□□ -0.33
RFX1-207ENST00000589937 ARF5P84085 180 aa12.96□□□□□ -0.33
RFX1-207ENST00000589937 MYL5Q02045 173 aa12.96□□□□□ -0.33
RFX1-207ENST00000589937 HNRNPDQ14103 355 aaKnown RBP12.96□□□□□ -0.33
RFX1-207ENST00000589937 STX1AQ16623 288 aa12.96□□□□□ -0.33
RFX1-207ENST00000589937 MANEALQ5VSG8 457 aa12.96□□□□□ -0.33
RFX1-207ENST00000589937 NAPEPLDQ6IQ20 393 aa12.96□□□□□ -0.33
RFX1-207ENST00000589937 LRSAM1Q6UWE0 723 aa12.96□□□□□ -0.33
RFX1-207ENST00000589937 KDM7AQ6ZMT4 941 aa12.96□□□□□ -0.33
RFX1-207ENST00000589937 AOPEPQ8N6M6 819 aa12.96□□□□□ -0.33
RFX1-207ENST00000589937 OR6K2Q8NGY2 324 aa12.96□□□□□ -0.33
RFX1-207ENST00000589937 ELF4Q99607 663 aaPredicted RBP12.96□□□□□ -0.33
RFX1-207ENST00000589937 SPON2Q9BUD6 331 aa12.96□□□□□ -0.33
RFX1-207ENST00000589937 C2orf49Q9BVC5 232 aaPredicted RBP12.96□□□□□ -0.33
RFX1-207ENST00000589937 LIMA1Q9UHB6 759 aaKnown RBP12.96□□□□□ -0.33
RFX1-207ENST00000589937 APOBEC2Q9Y235 224 aaKnown RBP12.96□□□□□ -0.33
RFX1-207ENST00000589937 FCF1Q9Y324 198 aaKnown RBP12.96□□□□□ -0.33
RFX1-207ENST00000589937 LOC400499M0QZD8 3231 aa12.96□□□□□ -0.33
RFX1-207ENST00000589937 FAM221BA6H8Z2 402 aa12.95□□□□□ -0.34
RFX1-207ENST00000589937 C1QTNF3-AMACRE9PGA6 284 aa12.95□□□□□ -0.34
RFX1-207ENST00000589937 ALOX15BO15296 676 aa12.95□□□□□ -0.34
RFX1-207ENST00000589937 PCDHGA12O60330 932 aa12.95□□□□□ -0.34
RFX1-207ENST00000589937 RNGTTO60942 597 aaKnown RBP12.95□□□□□ -0.34
RFX1-207ENST00000589937 SDC3O75056 442 aa12.95□□□□□ -0.34
RFX1-207ENST00000589937 DKK1O94907 266 aa12.95□□□□□ -0.34
RFX1-207ENST00000589937 F9P00740 461 aa12.95□□□□□ -0.34
RFX1-207ENST00000589937 UNGP13051 313 aaPredicted RBP12.95□□□□□ -0.34
RFX1-207ENST00000589937 EPHA8P29322 1005 aaPredicted RBP12.95□□□□□ -0.34
RFX1-207ENST00000589937 GKP32189 559 aa12.95□□□□□ -0.34
RFX1-207ENST00000589937 CHRNA3P32297 505 aa12.95□□□□□ -0.34
RFX1-207ENST00000589937 HDAC4P56524 1084 aa12.95□□□□□ -0.34
RFX1-207ENST00000589937 NXPH1P58417 271 aa12.95□□□□□ -0.34
RFX1-207ENST00000589937 KRT83P78385 493 aa12.95□□□□□ -0.34
RFX1-207ENST00000589937 SCAPQ12770 1279 aa12.95□□□□□ -0.34
RFX1-207ENST00000589937 BNIP3Q12983 259 aa12.95□□□□□ -0.34
RFX1-207ENST00000589937 DNAJC3Q13217 504 aa12.95□□□□□ -0.34
RFX1-207ENST00000589937 CLEC16AQ2KHT3 1053 aa12.95□□□□□ -0.34
RFX1-207ENST00000589937 ARSIQ5FYB1 569 aa12.95□□□□□ -0.34
RFX1-207ENST00000589937 CT47A1Q5JQC4 288 aaPredicted RBP12.95□□□□□ -0.34
RFX1-207ENST00000589937 FKBP15Q5T1M5 1219 aa12.95□□□□□ -0.34
RFX1-207ENST00000589937 SEL1L3Q68CR1 1132 aa12.95□□□□□ -0.34
RFX1-207ENST00000589937 SMYD5Q6GMV2 418 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms