RNA–Protein interactions for RNA: ENST00000589118.5

SF3A2-204, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-204ENST00000589118 ENDOD1O94919 500 aa15.48■□□□□ 0.07
SF3A2-204ENST00000589118 FBXO21O94952 628 aa15.48■□□□□ 0.07
SF3A2-204ENST00000589118 MYL1P05976 194 aa15.48■□□□□ 0.07
SF3A2-204ENST00000589118 SRCP12931 536 aa15.48■□□□□ 0.07
SF3A2-204ENST00000589118 RBMS1P29558 406 aaKnown RBP15.48■□□□□ 0.07
SF3A2-204ENST00000589118 PRCPP42785 496 aa15.48■□□□□ 0.07
SF3A2-204ENST00000589118 GPD2P43304 727 aa15.48■□□□□ 0.07
SF3A2-204ENST00000589118 CLN3Q13286 438 aa15.48■□□□□ 0.07
SF3A2-204ENST00000589118 MAPK8IP2Q13387 824 aaPredicted RBP15.48■□□□□ 0.07
SF3A2-204ENST00000589118 FZD2Q14332 565 aa15.48■□□□□ 0.07
SF3A2-204ENST00000589118 CCDC81Q6ZN84 652 aa15.48■□□□□ 0.07
SF3A2-204ENST00000589118 KRBA2Q6ZNG9 492 aa15.48■□□□□ 0.07
SF3A2-204ENST00000589118 PTAR1Q7Z6K3 402 aaPredicted RBP15.48■□□□□ 0.07
SF3A2-204ENST00000589118 DSG4Q86SJ6 1040 aa15.48■□□□□ 0.07
SF3A2-204ENST00000589118 HORMAD1Q86X24 394 aa15.48■□□□□ 0.07
SF3A2-204ENST00000589118 PPM1KQ8N3J5 372 aa15.48■□□□□ 0.07
SF3A2-204ENST00000589118 SH2D3CQ8N5H7 860 aa15.48■□□□□ 0.07
SF3A2-204ENST00000589118 SNRNP27Q8WVK2 155 aaKnown RBP15.48■□□□□ 0.07
SF3A2-204ENST00000589118 ERCC4Q92889 916 aaPredicted RBP15.48■□□□□ 0.07
SF3A2-204ENST00000589118 TCEAL2Q9H3H9 227 aaPredicted RBP15.48■□□□□ 0.07
SF3A2-204ENST00000589118 PREBQ9HCU5 417 aa15.48■□□□□ 0.07
SF3A2-204ENST00000589118 ACP6Q9NPH0 428 aa15.48■□□□□ 0.07
SF3A2-204ENST00000589118 SLC25A13Q9UJS0 675 aa15.48■□□□□ 0.07
SF3A2-204ENST00000589118 VANGL2Q9ULK5 521 aa15.48■□□□□ 0.07
SF3A2-204ENST00000589118 OR51B4Q9Y5P0 310 aa15.48■□□□□ 0.07
SF3A2-204ENST00000589118 SNX10Q9Y5X0 201 aa15.48■□□□□ 0.07
SF3A2-204ENST00000589118 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.47■□□□□ 0.07
SF3A2-204ENST00000589118 E5RJQ4 531 aa15.47■□□□□ 0.07
SF3A2-204ENST00000589118 CNTN5O94779 1100 aa15.47■□□□□ 0.07
SF3A2-204ENST00000589118 PAK4O96013 591 aaPredicted RBP15.47■□□□□ 0.07
SF3A2-204ENST00000589118 IGLV3-25P01717 112 aa15.47■□□□□ 0.07
SF3A2-204ENST00000589118 HSP90AA1P07900 732 aaKnown RBP15.47■□□□□ 0.07
SF3A2-204ENST00000589118 HNRNPA2B1P22626 353 aaKnown RBP15.47■□□□□ 0.07
SF3A2-204ENST00000589118 RRM1P23921 792 aa15.47■□□□□ 0.07
SF3A2-204ENST00000589118 AKT2P31751 481 aa15.47■□□□□ 0.07
SF3A2-204ENST00000589118 CHRNA3P32297 505 aa15.47■□□□□ 0.07
SF3A2-204ENST00000589118 NUDT1P36639 197 aa15.47■□□□□ 0.07
SF3A2-204ENST00000589118 SKOR1P84550 965 aa15.47■□□□□ 0.07
SF3A2-204ENST00000589118 SULT2A1Q06520 285 aa15.47■□□□□ 0.07
SF3A2-204ENST00000589118 C1QBPQ07021 282 aaKnown RBP15.47■□□□□ 0.07
SF3A2-204ENST00000589118 ZNF177Q13360 481 aaPredicted RBP15.47■□□□□ 0.07
SF3A2-204ENST00000589118 NNTQ13423 1086 aa15.47■□□□□ 0.07
SF3A2-204ENST00000589118 SLC12A1Q13621 1099 aa15.47■□□□□ 0.07
SF3A2-204ENST00000589118 TGIF1Q15583 401 aa15.47■□□□□ 0.07
SF3A2-204ENST00000589118 LINC00303Q3SY05 128 aa15.47■□□□□ 0.07
SF3A2-204ENST00000589118 ARSIQ5FYB1 569 aa15.47■□□□□ 0.07
SF3A2-204ENST00000589118 LINGO4Q6UY18 593 aa15.47■□□□□ 0.07
SF3A2-204ENST00000589118 ATP6V0D2Q8N8Y2 350 aa15.47■□□□□ 0.07
SF3A2-204ENST00000589118 ZNF548Q8NEK5 533 aaPredicted RBP15.47■□□□□ 0.07
SF3A2-204ENST00000589118 GRIN3AQ8TCU5 1115 aa15.47■□□□□ 0.07
SF3A2-204ENST00000589118 RPRD1AQ96P16 312 aaPredicted RBP15.47■□□□□ 0.07
SF3A2-204ENST00000589118 TNKS2Q9H2K2 1166 aa15.47■□□□□ 0.07
SF3A2-204ENST00000589118 VPS28Q9UK41 221 aa15.47■□□□□ 0.07
SF3A2-204ENST00000589118 TCAF2A6NFQ2 919 aa15.46■□□□□ 0.07
SF3A2-204ENST00000589118 MUSKO15146 869 aa15.46■□□□□ 0.07
SF3A2-204ENST00000589118 SPINT1O43278 529 aa15.46■□□□□ 0.07
SF3A2-204ENST00000589118 GRAP2O75791 330 aa15.46■□□□□ 0.07
SF3A2-204ENST00000589118 TNFSF15O95150 251 aa15.46■□□□□ 0.07
SF3A2-204ENST00000589118 GP1BAP07359 652 aa15.46■□□□□ 0.07
SF3A2-204ENST00000589118 ALPPL2P10696 532 aa15.46■□□□□ 0.07
SF3A2-204ENST00000589118 TBXAS1P24557 533 aaPredicted RBP15.46■□□□□ 0.07
SF3A2-204ENST00000589118 RPL34P49207 117 aaKnown RBP15.46■□□□□ 0.07
SF3A2-204ENST00000589118 FMO5P49326 533 aa15.46■□□□□ 0.07
SF3A2-204ENST00000589118 PNOCQ13519 176 aa15.46■□□□□ 0.07
SF3A2-204ENST00000589118 C1orf61Q13536 156 aa15.46■□□□□ 0.07
SF3A2-204ENST00000589118 EIF4EBP2Q13542 120 aaPredicted RBP15.46■□□□□ 0.07
SF3A2-204ENST00000589118 AUHQ13825 339 aaKnown RBP15.46■□□□□ 0.07
SF3A2-204ENST00000589118 ATL3Q6DD88 541 aa15.46■□□□□ 0.07
SF3A2-204ENST00000589118 ABI3BPQ7Z7G0 1075 aa15.46■□□□□ 0.07
SF3A2-204ENST00000589118 RBFAQ8N0V3 343 aa15.46■□□□□ 0.07
SF3A2-204ENST00000589118 OR2A12Q8NGT7 310 aa15.46■□□□□ 0.07
SF3A2-204ENST00000589118 LMO3Q8TAP4 145 aa15.46■□□□□ 0.07
SF3A2-204ENST00000589118 LMX1AQ8TE12 382 aa15.46■□□□□ 0.07
SF3A2-204ENST00000589118 RNF34Q969K3 372 aa15.46■□□□□ 0.07
SF3A2-204ENST00000589118 SPATA32Q96LK8 384 aa15.46■□□□□ 0.07
SF3A2-204ENST00000589118 NT5C1BQ96P26 610 aa15.46■□□□□ 0.07
SF3A2-204ENST00000589118 PSMB7Q99436 277 aa15.46■□□□□ 0.07
SF3A2-204ENST00000589118 IL17BQ9UHF5 180 aa15.46■□□□□ 0.07
SF3A2-204ENST00000589118 NEMP2A6NFY4 417 aa15.45■□□□□ 0.06
SF3A2-204ENST00000589118 CDRT15L2A8MXV6 281 aa15.45■□□□□ 0.06
SF3A2-204ENST00000589118 DUSP3P51452 185 aaPredicted RBP15.45■□□□□ 0.06
SF3A2-204ENST00000589118 PDX1P52945 283 aa15.45■□□□□ 0.06
SF3A2-204ENST00000589118 YWHAZP63104 245 aaKnown RBP15.45■□□□□ 0.06
SF3A2-204ENST00000589118 SRSF1Q07955 248 aaKnown RBP eCLIP15.45■□□□□ 0.06
SF3A2-204ENST00000589118 C6orf132Q5T0Z8 1188 aa15.45■□□□□ 0.06
SF3A2-204ENST00000589118 DEFB106AQ8N104 65 aa15.45■□□□□ 0.06
SF3A2-204ENST00000589118 ATP11CQ8NB49 1132 aa15.45■□□□□ 0.06
SF3A2-204ENST00000589118 KREMEN1Q96MU8 473 aa15.45■□□□□ 0.06
SF3A2-204ENST00000589118 SLC4A5Q9BY07 1137 aa15.45■□□□□ 0.06
SF3A2-204ENST00000589118 SIK2Q9H0K1 926 aa15.45■□□□□ 0.06
SF3A2-204ENST00000589118 SYNDIG1Q9H7V2 258 aa15.45■□□□□ 0.06
SF3A2-204ENST00000589118 FAM204AQ9H8W3 233 aa15.45■□□□□ 0.06
SF3A2-204ENST00000589118 POPDC2Q9HBU9 364 aa15.45■□□□□ 0.06
SF3A2-204ENST00000589118 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.45■□□□□ 0.06
SF3A2-204ENST00000589118 DDIT4Q9NX09 232 aa15.45■□□□□ 0.06
SF3A2-204ENST00000589118 ARMCX3Q9UH62 379 aaPredicted RBP15.45■□□□□ 0.06
SF3A2-204ENST00000589118 PNMA8BQ9ULN7 279 aaPredicted RBP15.45■□□□□ 0.06
SF3A2-204ENST00000589118 HS3ST4Q9Y661 456 aa15.45■□□□□ 0.06
SF3A2-204ENST00000589118 FAM170AA1A519 330 aa15.44■□□□□ 0.06
SF3A2-204ENST00000589118 ALOX15BO15296 676 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms