RNA–Protein interactions for RNA: ENST00000588230.5

CIRBP-217, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5 BASIC

Gene CIRBP, Length 1,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-217ENST00000588230 CATSPERBQ9H7T0 1116 aa19.64■□□□□ 0.73
CIRBP-217ENST00000588230 NDFIP2Q9NV92 336 aa19.64■□□□□ 0.73
CIRBP-217ENST00000588230 FBXL12Q9NXK8 326 aa19.64■□□□□ 0.73
CIRBP-217ENST00000588230 NEU3Q9UQ49 428 aa19.64■□□□□ 0.73
CIRBP-217ENST00000588230 PCDH15Q96QU1 1955 aa19.64■□□□□ 0.73
CIRBP-217ENST00000588230 MEI4A8MW99 385 aa19.63■□□□□ 0.73
CIRBP-217ENST00000588230 K7ERQ8 282 aa19.63■□□□□ 0.73
CIRBP-217ENST00000588230 CDX4O14627 284 aaPredicted RBP19.63■□□□□ 0.73
CIRBP-217ENST00000588230 KHNYNO15037 678 aaKnown RBP19.63■□□□□ 0.73
CIRBP-217ENST00000588230 MID1O15344 667 aa19.63■□□□□ 0.73
CIRBP-217ENST00000588230 LRCH4O75427 683 aa19.63■□□□□ 0.73
CIRBP-217ENST00000588230 IL1BP01584 269 aa19.63■□□□□ 0.73
CIRBP-217ENST00000588230 GLDCP23378 1020 aa19.63■□□□□ 0.73
CIRBP-217ENST00000588230 HTR7P34969 479 aa19.63■□□□□ 0.73
CIRBP-217ENST00000588230 HOXD12P35452 270 aa19.63■□□□□ 0.73
CIRBP-217ENST00000588230 ACVRL1P37023 503 aa19.63■□□□□ 0.73
CIRBP-217ENST00000588230 PSMD8P48556 350 aa19.63■□□□□ 0.73
CIRBP-217ENST00000588230 CLCN6P51797 869 aa19.63■□□□□ 0.73
CIRBP-217ENST00000588230 TPI1P60174 286 aa19.63■□□□□ 0.73
CIRBP-217ENST00000588230 TBX2Q13207 712 aaPredicted RBP19.63■□□□□ 0.73
CIRBP-217ENST00000588230 SEMA3BQ13214 749 aa19.63■□□□□ 0.73
CIRBP-217ENST00000588230 POLD3Q15054 466 aaPredicted RBP19.63■□□□□ 0.73
CIRBP-217ENST00000588230 WDR45BQ5MNZ6 344 aa19.63■□□□□ 0.73
CIRBP-217ENST00000588230 Q6ZVU0 165 aa19.63■□□□□ 0.73
CIRBP-217ENST00000588230 USP30Q70CQ3 517 aa19.63■□□□□ 0.73
CIRBP-217ENST00000588230 RGL4Q8IZJ4 473 aa19.63■□□□□ 0.73
CIRBP-217ENST00000588230 CADM4Q8NFZ8 388 aa19.63■□□□□ 0.73
CIRBP-217ENST00000588230 ARHGEF2Q92974 986 aaKnown RBP19.63■□□□□ 0.73
CIRBP-217ENST00000588230 ARHGEF26Q96DR7 871 aa19.63■□□□□ 0.73
CIRBP-217ENST00000588230 CCDC42Q96M95 316 aa19.63■□□□□ 0.73
CIRBP-217ENST00000588230 PEBP4Q96S96 227 aa19.63■□□□□ 0.73
CIRBP-217ENST00000588230 CHP1Q99653 195 aa19.63■□□□□ 0.73
CIRBP-217ENST00000588230 SNRNP25Q9BV90 132 aaKnown RBP19.63■□□□□ 0.73
CIRBP-217ENST00000588230 BTBD1Q9H0C5 482 aa19.63■□□□□ 0.73
CIRBP-217ENST00000588230 IP6K2Q9UHH9 426 aa19.63■□□□□ 0.73
CIRBP-217ENST00000588230 ANAPC7Q9UJX3 599 aa19.63■□□□□ 0.73
CIRBP-217ENST00000588230 HPCAL4Q9UM19 191 aa19.63■□□□□ 0.73
CIRBP-217ENST00000588230 NENFQ9UMX5 172 aa19.63■□□□□ 0.73
CIRBP-217ENST00000588230 FARP1Q9Y4F1 1045 aaPredicted RBP19.63■□□□□ 0.73
CIRBP-217ENST00000588230 CACNA1EQ15878 2313 aa19.62■□□□□ 0.73
CIRBP-217ENST00000588230 MYO1FO00160 1098 aa19.62■□□□□ 0.73
CIRBP-217ENST00000588230 FGF10O15520 208 aaPredicted RBP19.62■□□□□ 0.73
CIRBP-217ENST00000588230 RNASEH2AO75792 299 aaKnown RBP19.62■□□□□ 0.73
CIRBP-217ENST00000588230 ZMPSTE24O75844 475 aa19.62■□□□□ 0.73
CIRBP-217ENST00000588230 ADH1BP00325 375 aa19.62■□□□□ 0.73
CIRBP-217ENST00000588230 H2AFZP0C0S5 128 aa19.62■□□□□ 0.73
CIRBP-217ENST00000588230 C5AR1P21730 350 aa19.62■□□□□ 0.73
CIRBP-217ENST00000588230 ACSL1P33121 698 aa19.62■□□□□ 0.73
CIRBP-217ENST00000588230 PCK1P35558 622 aa19.62■□□□□ 0.73
CIRBP-217ENST00000588230 CA9Q16790 459 aa19.62■□□□□ 0.73
CIRBP-217ENST00000588230 ASTE1Q2TB18 679 aaPredicted RBP19.62■□□□□ 0.73
CIRBP-217ENST00000588230 TRIM61Q5EBN2 209 aa19.62■□□□□ 0.73
CIRBP-217ENST00000588230 SLC23A3Q6PIS1 610 aa19.62■□□□□ 0.73
CIRBP-217ENST00000588230 H2AFVQ71UI9 128 aa19.62■□□□□ 0.73
CIRBP-217ENST00000588230 GAS2L3Q86XJ1 694 aa19.62■□□□□ 0.73
CIRBP-217ENST00000588230 ZNF354CQ86Y25 554 aa19.62■□□□□ 0.73
CIRBP-217ENST00000588230 PSTKQ8IV42 348 aaKnown RBP19.62■□□□□ 0.73
CIRBP-217ENST00000588230 CTNNBL1Q8WYA6 563 aaPredicted RBP19.62■□□□□ 0.73
CIRBP-217ENST00000588230 CCDC114Q96M63 670 aa19.62■□□□□ 0.73
CIRBP-217ENST00000588230 OMDQ99983 421 aa19.62■□□□□ 0.73
CIRBP-217ENST00000588230 ACE2Q9BYF1 805 aaPredicted RBP19.62■□□□□ 0.73
CIRBP-217ENST00000588230 NHEJ1Q9H9Q4 299 aaPredicted RBP19.62■□□□□ 0.73
CIRBP-217ENST00000588230 SGK2Q9HBY8 427 aa19.62■□□□□ 0.73
CIRBP-217ENST00000588230 DONSONQ9NYP3 566 aa19.62■□□□□ 0.73
CIRBP-217ENST00000588230 CTTNBP2NLQ9P2B4 639 aa19.62■□□□□ 0.73
CIRBP-217ENST00000588230 EEF2KO00418 725 aaKnown RBP19.61■□□□□ 0.73
CIRBP-217ENST00000588230 MCF2LO15068 1137 aa19.61■□□□□ 0.73
CIRBP-217ENST00000588230 ALOX15BO15296 676 aa19.61■□□□□ 0.73
CIRBP-217ENST00000588230 DAPK3O43293 454 aa19.61■□□□□ 0.73
CIRBP-217ENST00000588230 SMAD6O43541 496 aaKnown RBP19.61■□□□□ 0.73
CIRBP-217ENST00000588230 SEMA4FO95754 770 aa19.61■□□□□ 0.73
CIRBP-217ENST00000588230 RECQLP46063 649 aaPredicted RBP19.61■□□□□ 0.73
CIRBP-217ENST00000588230 ZNF75DP51815 510 aa19.61■□□□□ 0.73
CIRBP-217ENST00000588230 GEMIN4P57678 1058 aaKnown RBP19.61■□□□□ 0.73
CIRBP-217ENST00000588230 BOLA3Q53S33 107 aa19.61■□□□□ 0.73
CIRBP-217ENST00000588230 PPP6R3Q5H9R7 873 aaPredicted RBP19.61■□□□□ 0.73
CIRBP-217ENST00000588230 PPM1JQ5JR12 505 aa19.61■□□□□ 0.73
CIRBP-217ENST00000588230 FAM46CQ5VWP2 391 aa19.61■□□□□ 0.73
CIRBP-217ENST00000588230 DAB2IPQ5VWQ8 1189 aa19.61■□□□□ 0.73
CIRBP-217ENST00000588230 HDDC3Q8N4P3 179 aa19.61■□□□□ 0.73
CIRBP-217ENST00000588230 BTBD6Q96KE9 485 aa19.61■□□□□ 0.73
CIRBP-217ENST00000588230 PCED1AQ9H1Q7 454 aa19.61■□□□□ 0.73
CIRBP-217ENST00000588230 CAPN10Q9HC96 672 aa19.61■□□□□ 0.73
CIRBP-217ENST00000588230 ASCC3Q8N3C0 2202 aaKnown RBP19.61■□□□□ 0.73
CIRBP-217ENST00000588230 A0A1W2PP55 124 aa19.6■□□□□ 0.73
CIRBP-217ENST00000588230 C4orf47A7E2U8 309 aa19.6■□□□□ 0.73
CIRBP-217ENST00000588230 METTL12A8MUP2 240 aa19.6■□□□□ 0.73
CIRBP-217ENST00000588230 WASH4PA8MWX3 477 aa19.6■□□□□ 0.73
CIRBP-217ENST00000588230 SERPINH1P50454 418 aaKnown RBP19.6■□□□□ 0.73
CIRBP-217ENST00000588230 DNA2P51530 1060 aa19.6■□□□□ 0.73
CIRBP-217ENST00000588230 YBEYP58557 167 aaPredicted RBP19.6■□□□□ 0.73
CIRBP-217ENST00000588230 ARF5P84085 180 aa19.6■□□□□ 0.73
CIRBP-217ENST00000588230 C22orf39Q6P5X5 142 aa19.6■□□□□ 0.73
CIRBP-217ENST00000588230 CYP4V2Q6ZWL3 525 aaPredicted RBP19.6■□□□□ 0.73
CIRBP-217ENST00000588230 RABEPKQ7Z6M1 372 aa19.6■□□□□ 0.73
CIRBP-217ENST00000588230 NIPA2Q8N8Q9 360 aa19.6■□□□□ 0.73
CIRBP-217ENST00000588230 CEP76Q8TAP6 659 aa19.6■□□□□ 0.73
CIRBP-217ENST00000588230 ZNF564Q8TBZ8 553 aaPredicted RBP19.6■□□□□ 0.73
CIRBP-217ENST00000588230 KCTD15Q96SI1 283 aaPredicted RBP19.6■□□□□ 0.73
CIRBP-217ENST00000588230 PACSIN1Q9BY11 444 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms