RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 KIRREL3Q8IZU9 778 aa14.96□□□□□ -0.01
CCDC43-203ENST00000588210 PLD5Q8N7P1 536 aa14.96□□□□□ -0.01
CCDC43-203ENST00000588210 UBA3Q8TBC4 463 aa14.96□□□□□ -0.01
CCDC43-203ENST00000588210 GIPC2Q8TF65 315 aa14.96□□□□□ -0.01
CCDC43-203ENST00000588210 CFAP36Q96G28 342 aa14.96□□□□□ -0.01
CCDC43-203ENST00000588210 NSL1Q96IY1 281 aa14.96□□□□□ -0.01
CCDC43-203ENST00000588210 CADM1Q9BY67 442 aaKnown RBP14.96□□□□□ -0.01
CCDC43-203ENST00000588210 KLC2Q9H0B6 622 aa14.96□□□□□ -0.01
CCDC43-203ENST00000588210 TRIM49D1C9J1S8 452 aa14.96□□□□□ -0.02
CCDC43-203ENST00000588210 E5RJQ4 531 aa14.96□□□□□ -0.02
CCDC43-203ENST00000588210 COPEO14579 308 aa14.96□□□□□ -0.02
CCDC43-203ENST00000588210 ZNF197O14709 1029 aa14.96□□□□□ -0.02
CCDC43-203ENST00000588210 TRDMT1O14717 391 aaKnown RBP14.96□□□□□ -0.02
CCDC43-203ENST00000588210 APOL1O14791 398 aa14.96□□□□□ -0.02
CCDC43-203ENST00000588210 KRT37O76014 449 aa14.96□□□□□ -0.02
CCDC43-203ENST00000588210 SNRPAP09012 282 aaKnown RBP14.96□□□□□ -0.02
CCDC43-203ENST00000588210 FSHRP23945 695 aa14.96□□□□□ -0.02
CCDC43-203ENST00000588210 SERPINB3P29508 390 aa14.96□□□□□ -0.02
CCDC43-203ENST00000588210 NTHL1P78549 312 aa14.96□□□□□ -0.02
CCDC43-203ENST00000588210 RAB6CQ53S08 254 aa14.96□□□□□ -0.02
CCDC43-203ENST00000588210 PPP1R26Q5T8A7 1209 aaPredicted RBP14.96□□□□□ -0.02
CCDC43-203ENST00000588210 SLC9A4Q6AI14 798 aa14.96□□□□□ -0.02
CCDC43-203ENST00000588210 OR6B2Q6IFH4 312 aa14.96□□□□□ -0.02
CCDC43-203ENST00000588210 C1orf228Q6PIY5 440 aa14.96□□□□□ -0.02
CCDC43-203ENST00000588210 PRPF39Q86UA1 669 aaKnown RBP14.96□□□□□ -0.02
CCDC43-203ENST00000588210 TRIM42Q8IWZ5 723 aa14.96□□□□□ -0.02
CCDC43-203ENST00000588210 PQLC3Q8N755 202 aa14.96□□□□□ -0.02
CCDC43-203ENST00000588210 TTC8Q8TAM2 541 aa14.96□□□□□ -0.02
CCDC43-203ENST00000588210 LRRC39Q96DD0 335 aa14.96□□□□□ -0.02
CCDC43-203ENST00000588210 PIWIL1Q96J94 861 aaKnown RBP14.96□□□□□ -0.02
CCDC43-203ENST00000588210 SRPK1Q96SB4 655 aaKnown RBP14.96□□□□□ -0.02
CCDC43-203ENST00000588210 RAB6CQ9H0N0 254 aa14.96□□□□□ -0.02
CCDC43-203ENST00000588210 DCLRE1BQ9H816 532 aa14.96□□□□□ -0.02
CCDC43-203ENST00000588210 TSPAN16Q9UKR8 245 aa14.96□□□□□ -0.02
CCDC43-203ENST00000588210 DENND4AQ7Z401 1863 aa14.95□□□□□ -0.02
CCDC43-203ENST00000588210 ZNF487B1APH4 448 aa14.95□□□□□ -0.02
CCDC43-203ENST00000588210 AVILO75366 819 aa14.95□□□□□ -0.02
CCDC43-203ENST00000588210 FGF19O95750 216 aa14.95□□□□□ -0.02
CCDC43-203ENST00000588210 ZBED1O96006 694 aa14.95□□□□□ -0.02
CCDC43-203ENST00000588210 IL4RP24394 825 aa14.95□□□□□ -0.02
CCDC43-203ENST00000588210 ZP2Q05996 745 aa14.95□□□□□ -0.02
CCDC43-203ENST00000588210 BLMHQ13867 455 aa14.95□□□□□ -0.02
CCDC43-203ENST00000588210 STILQ15468 1287 aa14.95□□□□□ -0.02
CCDC43-203ENST00000588210 BOLA3Q53S33 107 aa14.95□□□□□ -0.02
CCDC43-203ENST00000588210 ARHGAP17Q68EM7 881 aa14.95□□□□□ -0.02
CCDC43-203ENST00000588210 OTOP3Q7RTS5 596 aa14.95□□□□□ -0.02
CCDC43-203ENST00000588210 MCUQ8NE86 351 aa14.95□□□□□ -0.02
CCDC43-203ENST00000588210 GPR152Q8TDT2 470 aa14.95□□□□□ -0.02
CCDC43-203ENST00000588210 TBCBQ99426 244 aa14.95□□□□□ -0.02
CCDC43-203ENST00000588210 LRRC3Q9BY71 257 aa14.95□□□□□ -0.02
CCDC43-203ENST00000588210 IQCGQ9H095 443 aaKnown RBP14.95□□□□□ -0.02
CCDC43-203ENST00000588210 PCDH18Q9HCL0 1135 aa14.95□□□□□ -0.02
CCDC43-203ENST00000588210 CSNK1G1Q9HCP0 422 aa14.95□□□□□ -0.02
CCDC43-203ENST00000588210 KRT82Q9NSB4 513 aa14.95□□□□□ -0.02
CCDC43-203ENST00000588210 ETNK2Q9NVF9 386 aa14.95□□□□□ -0.02
CCDC43-203ENST00000588210 ZC3H7BQ9UGR2 993 aaKnown RBP14.95□□□□□ -0.02
CCDC43-203ENST00000588210 SLC38A8A6NNN8 435 aa14.94□□□□□ -0.02
CCDC43-203ENST00000588210 ENTPD5O75356 428 aa14.94□□□□□ -0.02
CCDC43-203ENST00000588210 AP1G2O75843 785 aa14.94□□□□□ -0.02
CCDC43-203ENST00000588210 NEFHP12036 1026 aa14.94□□□□□ -0.02
CCDC43-203ENST00000588210 RBL1P28749 1068 aa14.94□□□□□ -0.02
CCDC43-203ENST00000588210 ADORA2BP29275 332 aa14.94□□□□□ -0.02
CCDC43-203ENST00000588210 CACNA2D1P54289 1103 aa14.94□□□□□ -0.02
CCDC43-203ENST00000588210 CDO1Q16878 200 aa14.94□□□□□ -0.02
CCDC43-203ENST00000588210 CCDC14Q49A88 953 aa14.94□□□□□ -0.02
CCDC43-203ENST00000588210 PRSS36Q5K4E3 855 aa14.94□□□□□ -0.02
CCDC43-203ENST00000588210 LGSNQ5TDP6 509 aa14.94□□□□□ -0.02
CCDC43-203ENST00000588210 SDHAF4Q5VUM1 108 aa14.94□□□□□ -0.02
CCDC43-203ENST00000588210 C4orf22Q6V702 233 aa14.94□□□□□ -0.02
CCDC43-203ENST00000588210 CAND1Q86VP6 1230 aaKnown RBP14.94□□□□□ -0.02
CCDC43-203ENST00000588210 TMC8Q8IU68 726 aa14.94□□□□□ -0.02
CCDC43-203ENST00000588210 HS6ST3Q8IZP7 471 aa14.94□□□□□ -0.02
CCDC43-203ENST00000588210 TEX9Q8N6V9 391 aa14.94□□□□□ -0.02
CCDC43-203ENST00000588210 PPM1NQ8N819 430 aa14.94□□□□□ -0.02
CCDC43-203ENST00000588210 OXNAD1Q96HP4 312 aaPredicted RBP14.94□□□□□ -0.02
CCDC43-203ENST00000588210 C7orf26Q96N11 449 aa14.94□□□□□ -0.02
CCDC43-203ENST00000588210 ZNF670Q9BS34 389 aa14.94□□□□□ -0.02
CCDC43-203ENST00000588210 MMADHCQ9H3L0 296 aaPredicted RBP14.94□□□□□ -0.02
CCDC43-203ENST00000588210 PLAC1Q9HBJ0 212 aa14.94□□□□□ -0.02
CCDC43-203ENST00000588210 DMAP1Q9NPF5 467 aaPredicted RBP14.94□□□□□ -0.02
CCDC43-203ENST00000588210 FBXO6Q9NRD1 293 aaPredicted RBP14.94□□□□□ -0.02
CCDC43-203ENST00000588210 UXTQ9UBK9 157 aaPredicted RBP14.94□□□□□ -0.02
CCDC43-203ENST00000588210 MRPS23Q9Y3D9 190 aaKnown RBP14.94□□□□□ -0.02
CCDC43-203ENST00000588210 ZFP37Q9Y6Q3 630 aaPredicted RBP14.94□□□□□ -0.02
CCDC43-203ENST00000588210 TCF20Q9UGU0 1960 aaKnown RBP14.94□□□□□ -0.02
CCDC43-203ENST00000588210 GSC2O15499 205 aa14.94□□□□□ -0.02
CCDC43-203ENST00000588210 SMNDC1O75940 238 aaKnown RBP eCLIP14.94□□□□□ -0.02
CCDC43-203ENST00000588210 FAM200BP0CF97 657 aa14.94□□□□□ -0.02
CCDC43-203ENST00000588210 MYL4P12829 197 aa14.94□□□□□ -0.02
CCDC43-203ENST00000588210 HMGA1P17096 107 aaKnown RBP14.94□□□□□ -0.02
CCDC43-203ENST00000588210 MAGEA3P43357 314 aa14.94□□□□□ -0.02
CCDC43-203ENST00000588210 ZBTB16Q05516 673 aa14.94□□□□□ -0.02
CCDC43-203ENST00000588210 SLC5A9Q2M3M2 681 aa14.94□□□□□ -0.02
CCDC43-203ENST00000588210 SYCP2LQ5T4T6 812 aa14.94□□□□□ -0.02
CCDC43-203ENST00000588210 RFWD3Q6PCD5 774 aa14.94□□□□□ -0.02
CCDC43-203ENST00000588210 CDHR3Q6ZTQ4 885 aa14.94□□□□□ -0.02
CCDC43-203ENST00000588210 DENND5BQ6ZUT9 1274 aa14.94□□□□□ -0.02
CCDC43-203ENST00000588210 GET4Q7L5D6 327 aaPredicted RBP14.94□□□□□ -0.02
CCDC43-203ENST00000588210 CTAGE3PQ8IX95 158 aa14.94□□□□□ -0.02
CCDC43-203ENST00000588210 PCDH19Q8TAB3 1148 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms