RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 KCNV2Q8TDN2 545 aa10.93□□□□□ -0.66
SMARCA4-213ENST00000587988 OLFM3Q96PB7 478 aa10.93□□□□□ -0.66
SMARCA4-213ENST00000587988 FAM118BQ9BPY3 351 aa10.93□□□□□ -0.66
SMARCA4-213ENST00000587988 CHRDQ9H2X0 955 aa10.93□□□□□ -0.66
SMARCA4-213ENST00000587988 TMEM245Q9H330 911 aa10.93□□□□□ -0.66
SMARCA4-213ENST00000587988 PDFQ9HBH1 243 aa10.93□□□□□ -0.66
SMARCA4-213ENST00000587988 IPO11Q9UI26 975 aaKnown RBP10.93□□□□□ -0.66
SMARCA4-213ENST00000587988 SLC25A13Q9UJS0 675 aa10.93□□□□□ -0.66
SMARCA4-213ENST00000587988 HPCAL4Q9UM19 191 aa10.93□□□□□ -0.66
SMARCA4-213ENST00000587988 PLA2G4CQ9UP65 541 aa10.93□□□□□ -0.66
SMARCA4-213ENST00000587988 FCF1Q9Y324 198 aaKnown RBP10.93□□□□□ -0.66
SMARCA4-213ENST00000587988 RAD54BQ9Y620 910 aa10.93□□□□□ -0.66
SMARCA4-213ENST00000587988 STON1Q9Y6Q2 735 aa10.93□□□□□ -0.66
SMARCA4-213ENST00000587988 SHROOM3Q8TF72 1996 aa10.93□□□□□ -0.66
SMARCA4-213ENST00000587988 A0A0C4DFX4 3053 aa10.92□□□□□ -0.66
SMARCA4-213ENST00000587988 APOC4-APOC2K7ER74 178 aa10.92□□□□□ -0.66
SMARCA4-213ENST00000587988 ZNF185O15231 689 aa10.92□□□□□ -0.66
SMARCA4-213ENST00000587988 CEP104O60308 925 aa10.92□□□□□ -0.66
SMARCA4-213ENST00000587988 ZNF821O75541 412 aaPredicted RBP10.92□□□□□ -0.66
SMARCA4-213ENST00000587988 TJP3O95049 919 aa10.92□□□□□ -0.66
SMARCA4-213ENST00000587988 PEX11BO96011 259 aa10.92□□□□□ -0.66
SMARCA4-213ENST00000587988 APOC2P02655 101 aa10.92□□□□□ -0.66
SMARCA4-213ENST00000587988 VAV1P15498 845 aa10.92□□□□□ -0.66
SMARCA4-213ENST00000587988 COL9A1P20849 921 aa10.92□□□□□ -0.66
SMARCA4-213ENST00000587988 NTSR1P30989 418 aa10.92□□□□□ -0.66
SMARCA4-213ENST00000587988 DEKP35659 375 aaKnown RBP10.92□□□□□ -0.66
SMARCA4-213ENST00000587988 SERPINH1P50454 418 aaKnown RBP10.92□□□□□ -0.66
SMARCA4-213ENST00000587988 ETF1P62495 437 aaKnown RBP10.92□□□□□ -0.66
SMARCA4-213ENST00000587988 MTAPQ13126 283 aa10.92□□□□□ -0.66
SMARCA4-213ENST00000587988 ENPP2Q13822 863 aa10.92□□□□□ -0.66
SMARCA4-213ENST00000587988 DLG2Q15700 870 aa10.92□□□□□ -0.66
SMARCA4-213ENST00000587988 PAPD7Q5XG87 772 aaKnown RBP10.92□□□□□ -0.66
SMARCA4-213ENST00000587988 RETSATQ6NUM9 610 aa10.92□□□□□ -0.66
SMARCA4-213ENST00000587988 SERPINA13PQ6UXR4 307 aa10.92□□□□□ -0.66
SMARCA4-213ENST00000587988 TMEM92Q6UXU6 159 aa10.92□□□□□ -0.66
SMARCA4-213ENST00000587988 SYT10Q6XYQ8 523 aa10.92□□□□□ -0.66
SMARCA4-213ENST00000587988 ADAT2Q7Z6V5 191 aaKnown RBP10.92□□□□□ -0.66
SMARCA4-213ENST00000587988 FBXL6Q8N531 539 aa10.92□□□□□ -0.66
SMARCA4-213ENST00000587988 ATPAF2Q8N5M1 289 aa10.92□□□□□ -0.66
SMARCA4-213ENST00000587988 ATP11CQ8NB49 1132 aa10.92□□□□□ -0.66
SMARCA4-213ENST00000587988 COG1Q8WTW3 980 aa10.92□□□□□ -0.66
SMARCA4-213ENST00000587988 FRS2Q8WU20 508 aa10.92□□□□□ -0.66
SMARCA4-213ENST00000587988 P3H4Q92791 437 aa10.92□□□□□ -0.66
SMARCA4-213ENST00000587988 MS4A14Q96JA4 679 aa10.92□□□□□ -0.66
SMARCA4-213ENST00000587988 C16orf45Q96MC5 204 aaPredicted RBP10.92□□□□□ -0.66
SMARCA4-213ENST00000587988 OSBPL9Q96SU4 736 aa10.92□□□□□ -0.66
SMARCA4-213ENST00000587988 LGMNQ99538 433 aa10.92□□□□□ -0.66
SMARCA4-213ENST00000587988 NAPGQ99747 312 aaPredicted RBP10.92□□□□□ -0.66
SMARCA4-213ENST00000587988 C10orf88Q9H8K7 445 aa10.92□□□□□ -0.66
SMARCA4-213ENST00000587988 SP110Q9HB58 689 aa10.92□□□□□ -0.66
SMARCA4-213ENST00000587988 MMP17Q9ULZ9 603 aa10.92□□□□□ -0.66
SMARCA4-213ENST00000587988 SNX12Q9UMY4 172 aa10.92□□□□□ -0.66
SMARCA4-213ENST00000587988 HS3ST2Q9Y278 367 aa10.92□□□□□ -0.66
SMARCA4-213ENST00000587988 CTAGE9A4FU28 777 aa10.91□□□□□ -0.66
SMARCA4-213ENST00000587988 CHURC1-FNTBB4DL54 471 aa10.91□□□□□ -0.66
SMARCA4-213ENST00000587988 NPC1O15118 1278 aa10.91□□□□□ -0.66
SMARCA4-213ENST00000587988 ATP9BO43861 1147 aa10.91□□□□□ -0.66
SMARCA4-213ENST00000587988 NR2C2P49116 596 aa10.91□□□□□ -0.66
SMARCA4-213ENST00000587988 VASPP50552 380 aaPredicted RBP10.91□□□□□ -0.66
SMARCA4-213ENST00000587988 ST8SIA6P61647 398 aa10.91□□□□□ -0.66
SMARCA4-213ENST00000587988 OTUD4Q01804 1114 aaKnown RBP10.91□□□□□ -0.66
SMARCA4-213ENST00000587988 IL10RBQ08334 325 aa10.91□□□□□ -0.66
SMARCA4-213ENST00000587988 SLC20A2Q08357 652 aa10.91□□□□□ -0.66
SMARCA4-213ENST00000587988 PPIDQ08752 370 aaKnown RBP10.91□□□□□ -0.66
SMARCA4-213ENST00000587988 NOMO1Q15155 1222 aa10.91□□□□□ -0.66
SMARCA4-213ENST00000587988 CYTH1Q15438 398 aa10.91□□□□□ -0.66
SMARCA4-213ENST00000587988 SIX1Q15475 284 aaPredicted RBP10.91□□□□□ -0.66
SMARCA4-213ENST00000587988 ACCSLQ4AC99 568 aa10.91□□□□□ -0.66
SMARCA4-213ENST00000587988 CCDC181Q5TID7 509 aa10.91□□□□□ -0.66
SMARCA4-213ENST00000587988 KIAA1211LQ6NV74 962 aa10.91□□□□□ -0.66
SMARCA4-213ENST00000587988 ZC3H18Q86VM9 953 aaKnown RBP10.91□□□□□ -0.66
SMARCA4-213ENST00000587988 ZSCAN30Q86W11 494 aa10.91□□□□□ -0.66
SMARCA4-213ENST00000587988 RASGEF1CQ8N431 466 aa10.91□□□□□ -0.66
SMARCA4-213ENST00000587988 KDM1BQ8NB78 822 aa10.91□□□□□ -0.66
SMARCA4-213ENST00000587988 CCNYQ8ND76 341 aa10.91□□□□□ -0.66
SMARCA4-213ENST00000587988 CCDC26Q8TAB7 109 aa10.91□□□□□ -0.66
SMARCA4-213ENST00000587988 ACTL9Q8TC94 416 aa10.91□□□□□ -0.66
SMARCA4-213ENST00000587988 PTPRN2Q92932 1015 aa10.91□□□□□ -0.66
SMARCA4-213ENST00000587988 HDAC11Q96DB2 347 aa10.91□□□□□ -0.66
SMARCA4-213ENST00000587988 PBKQ96KB5 322 aa10.91□□□□□ -0.66
SMARCA4-213ENST00000587988 TSGA13Q96PP4 275 aa10.91□□□□□ -0.66
SMARCA4-213ENST00000587988 GABRG3Q99928 467 aa10.91□□□□□ -0.66
SMARCA4-213ENST00000587988 CD248Q9HCU0 757 aa10.91□□□□□ -0.66
SMARCA4-213ENST00000587988 SMARCAL1Q9NZC9 954 aa10.91□□□□□ -0.66
SMARCA4-213ENST00000587988 UBA2Q9UBT2 640 aaPredicted RBP10.91□□□□□ -0.66
SMARCA4-213ENST00000587988 R3HDM2Q9Y2K5 976 aaKnown RBP10.91□□□□□ -0.66
SMARCA4-213ENST00000587988 A0A1W2PQF6 199 aa10.9□□□□□ -0.66
SMARCA4-213ENST00000587988 ZSCAN5CA6NGD5 496 aaPredicted RBP10.9□□□□□ -0.66
SMARCA4-213ENST00000587988 GPR37L1O60883 481 aa10.9□□□□□ -0.66
SMARCA4-213ENST00000587988 SIN3BO75182 1162 aa10.9□□□□□ -0.66
SMARCA4-213ENST00000587988 TMCC1O94876 653 aa10.9□□□□□ -0.66
SMARCA4-213ENST00000587988 FGGP02679 453 aa10.9□□□□□ -0.66
SMARCA4-213ENST00000587988 EPHX1P07099 455 aa10.9□□□□□ -0.66
SMARCA4-213ENST00000587988 HOXB2P14652 356 aa10.9□□□□□ -0.66
SMARCA4-213ENST00000587988 MX2P20592 715 aa10.9□□□□□ -0.66
SMARCA4-213ENST00000587988 CCNCP24863 283 aa10.9□□□□□ -0.66
SMARCA4-213ENST00000587988 AVPR2P30518 371 aa10.9□□□□□ -0.66
SMARCA4-213ENST00000587988 CASQ1P31415 396 aa10.9□□□□□ -0.66
SMARCA4-213ENST00000587988 NNMTP40261 264 aa10.9□□□□□ -0.66
SMARCA4-213ENST00000587988 SATB1Q01826 763 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms