RNA–Protein interactions for RNA: ENST00000587223.1

NPC1-206, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 4

Gene NPC1, Length 590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-206ENST00000587223 ZNF217O75362 1048 aa6.69□□□□□ -1.34
NPC1-206ENST00000587223 RPP40O75818 363 aaKnown RBP6.69□□□□□ -1.34
NPC1-206ENST00000587223 ZMPSTE24O75844 475 aa6.69□□□□□ -1.34
NPC1-206ENST00000587223 DNTTP04053 509 aa6.69□□□□□ -1.34
NPC1-206ENST00000587223 CD48P09326 243 aa6.69□□□□□ -1.34
NPC1-206ENST00000587223 ACADMP11310 421 aa6.69□□□□□ -1.34
NPC1-206ENST00000587223 SRCP12931 536 aa6.69□□□□□ -1.34
NPC1-206ENST00000587223 NDUFV2P19404 249 aa6.69□□□□□ -1.34
NPC1-206ENST00000587223 GLDCP23378 1020 aa6.69□□□□□ -1.34
NPC1-206ENST00000587223 KDELR1P24390 212 aa6.69□□□□□ -1.34
NPC1-206ENST00000587223 IL4RP24394 825 aa6.69□□□□□ -1.34
NPC1-206ENST00000587223 NBL1P41271 181 aa6.69□□□□□ -1.34
NPC1-206ENST00000587223 PAPOLAP51003 745 aaKnown RBP6.69□□□□□ -1.34
NPC1-206ENST00000587223 DNA2P51530 1060 aa6.69□□□□□ -1.34
NPC1-206ENST00000587223 ARSEP51690 589 aa6.69□□□□□ -1.34
NPC1-206ENST00000587223 GEMIN4P57678 1058 aaKnown RBP6.69□□□□□ -1.34
NPC1-206ENST00000587223 ARF5P84085 180 aa6.69□□□□□ -1.34
NPC1-206ENST00000587223 NHLH1Q02575 133 aa6.69□□□□□ -1.34
NPC1-206ENST00000587223 SFSWAPQ12872 951 aaKnown RBP6.69□□□□□ -1.34
NPC1-206ENST00000587223 MMRN1Q13201 1228 aa6.69□□□□□ -1.34
NPC1-206ENST00000587223 SRSF5Q13243 272 aaKnown RBP6.69□□□□□ -1.34
NPC1-206ENST00000587223 DPYSQ14117 519 aa6.69□□□□□ -1.34
NPC1-206ENST00000587223 SIM2Q14190 667 aaPredicted RBP6.69□□□□□ -1.34
NPC1-206ENST00000587223 DPYSL3Q14195 570 aa6.69□□□□□ -1.34
NPC1-206ENST00000587223 PARP15Q460N3 678 aa6.69□□□□□ -1.34
NPC1-206ENST00000587223 ANKRD20A8PQ5CZ79 823 aa6.69□□□□□ -1.34
NPC1-206ENST00000587223 C9orf64Q5T6V5 341 aa6.69□□□□□ -1.34
NPC1-206ENST00000587223 LRRC38Q5VT99 294 aa6.69□□□□□ -1.34
NPC1-206ENST00000587223 TMCO3Q6UWJ1 677 aa6.69□□□□□ -1.34
NPC1-206ENST00000587223 PRR23BQ6ZRT6 265 aa6.69□□□□□ -1.34
NPC1-206ENST00000587223 STK40Q8N2I9 435 aa6.69□□□□□ -1.34
NPC1-206ENST00000587223 FAM71BQ8TC56 605 aa6.69□□□□□ -1.34
NPC1-206ENST00000587223 KIAA1524Q8TCG1 905 aa6.69□□□□□ -1.34
NPC1-206ENST00000587223 GAB3Q8WWW8 586 aa6.69□□□□□ -1.34
NPC1-206ENST00000587223 RLN3Q8WXF3 142 aa6.69□□□□□ -1.34
NPC1-206ENST00000587223 OR8D1Q8WZ84 308 aa6.69□□□□□ -1.34
NPC1-206ENST00000587223 RAPGEF5Q92565 580 aa6.69□□□□□ -1.34
NPC1-206ENST00000587223 PTPRN2Q92932 1015 aa6.69□□□□□ -1.34
NPC1-206ENST00000587223 NKD2Q969F2 451 aaPredicted RBP6.69□□□□□ -1.34
NPC1-206ENST00000587223 HMCESQ96FZ2 354 aa6.69□□□□□ -1.34
NPC1-206ENST00000587223 CELF6Q96J87 481 aaKnown RBP6.69□□□□□ -1.34
NPC1-206ENST00000587223 SPACA7Q96KW9 195 aa6.69□□□□□ -1.34
NPC1-206ENST00000587223 MRGPRX1Q96LB2 322 aa6.69□□□□□ -1.34
NPC1-206ENST00000587223 CCDC114Q96M63 670 aa6.69□□□□□ -1.34
NPC1-206ENST00000587223 CSPG4P5Q96PW8 444 aa6.69□□□□□ -1.34
NPC1-206ENST00000587223 SLC39A8Q9C0K1 460 aa6.69□□□□□ -1.34
NPC1-206ENST00000587223 MKRN2Q9H000 416 aaKnown RBP6.69□□□□□ -1.34
NPC1-206ENST00000587223 SLC6A17Q9H1V8 727 aa6.69□□□□□ -1.34
NPC1-206ENST00000587223 NOL6Q9H6R4 1146 aaKnown RBP6.69□□□□□ -1.34
NPC1-206ENST00000587223 FBRSQ9HAH7 460 aa6.69□□□□□ -1.34
NPC1-206ENST00000587223 ITM2CQ9NQX7 267 aa6.69□□□□□ -1.34
NPC1-206ENST00000587223 KLHL11Q9NVR0 708 aa6.69□□□□□ -1.34
NPC1-206ENST00000587223 DDX56Q9NY93 547 aaKnown RBP6.69□□□□□ -1.34
NPC1-206ENST00000587223 SALL4Q9UJQ4 1053 aa6.69□□□□□ -1.34
NPC1-206ENST00000587223 RAB23Q9ULC3 237 aa6.69□□□□□ -1.34
NPC1-206ENST00000587223 NEU3Q9UQ49 428 aa6.69□□□□□ -1.34
NPC1-206ENST00000587223 HS3ST2Q9Y278 367 aa6.69□□□□□ -1.34
NPC1-206ENST00000587223 NCKAP1Q9Y2A7 1128 aa6.69□□□□□ -1.34
NPC1-206ENST00000587223 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.69□□□□□ -1.34
NPC1-206ENST00000587223 ADGRG1Q9Y653 693 aa6.69□□□□□ -1.34
NPC1-206ENST00000587223 CACNA1HO95180 2353 aa6.69□□□□□ -1.34
NPC1-206ENST00000587223 SDK1Q7Z5N4 2213 aa6.69□□□□□ -1.34
NPC1-206ENST00000587223 CXorf51AA0A1B0GTR3 108 aa6.68□□□□□ -1.34
NPC1-206ENST00000587223 MCF2LO15068 1137 aa6.68□□□□□ -1.34
NPC1-206ENST00000587223 DCLK1O15075 740 aa6.68□□□□□ -1.34
NPC1-206ENST00000587223 PSTPIP1O43586 416 aa6.68□□□□□ -1.34
NPC1-206ENST00000587223 KRT86O43790 486 aa6.68□□□□□ -1.34
NPC1-206ENST00000587223 NDUFS2O75306 463 aa6.68□□□□□ -1.34
NPC1-206ENST00000587223 ZRANB2O95218 330 aaKnown RBP eCLIP6.68□□□□□ -1.34
NPC1-206ENST00000587223 IL1BP01584 269 aa6.68□□□□□ -1.34
NPC1-206ENST00000587223 LMNAP02545 664 aaKnown RBP6.68□□□□□ -1.34
NPC1-206ENST00000587223 KRT1P04264 644 aa6.68□□□□□ -1.34
NPC1-206ENST00000587223 CCDC175P0C221 793 aa6.68□□□□□ -1.34
NPC1-206ENST00000587223 VAV1P15498 845 aa6.68□□□□□ -1.34
NPC1-206ENST00000587223 OXTRP30559 389 aa6.68□□□□□ -1.34
NPC1-206ENST00000587223 SLC8A1P32418 973 aa6.68□□□□□ -1.34
NPC1-206ENST00000587223 SERPINB6P35237 376 aa6.68□□□□□ -1.34
NPC1-206ENST00000587223 SERPINH1P50454 418 aaKnown RBP6.68□□□□□ -1.34
NPC1-206ENST00000587223 COPAP53621 1224 aa6.68□□□□□ -1.34
NPC1-206ENST00000587223 RPS14P62263 151 aaKnown RBP6.68□□□□□ -1.34
NPC1-206ENST00000587223 ZBTB16Q05516 673 aa6.68□□□□□ -1.34
NPC1-206ENST00000587223 SERINC3Q13530 473 aa6.68□□□□□ -1.34
NPC1-206ENST00000587223 INO80DQ53TQ3 878 aaPredicted RBP6.68□□□□□ -1.34
NPC1-206ENST00000587223 CARD16Q5EG05 197 aa6.68□□□□□ -1.34
NPC1-206ENST00000587223 FAM46CQ5VWP2 391 aa6.68□□□□□ -1.34
NPC1-206ENST00000587223 ZNF776Q68DI1 518 aaPredicted RBP6.68□□□□□ -1.34
NPC1-206ENST00000587223 C11orf63Q6NUN7 778 aa6.68□□□□□ -1.34
NPC1-206ENST00000587223 LEKR1Q6ZMV7 388 aa6.68□□□□□ -1.34
NPC1-206ENST00000587223 Q6ZVU0 165 aa6.68□□□□□ -1.34
NPC1-206ENST00000587223 DSG4Q86SJ6 1040 aa6.68□□□□□ -1.34
NPC1-206ENST00000587223 METTL3Q86U44 580 aaKnown RBP6.68□□□□□ -1.34
NPC1-206ENST00000587223 C11orf74Q86VG3 221 aa6.68□□□□□ -1.34
NPC1-206ENST00000587223 CACUL1Q86Y37 369 aa6.68□□□□□ -1.34
NPC1-206ENST00000587223 MMAAQ8IVH4 418 aaKnown RBP6.68□□□□□ -1.34
NPC1-206ENST00000587223 RCOR2Q8IZ40 523 aa6.68□□□□□ -1.34
NPC1-206ENST00000587223 SYCE1Q8N0S2 351 aa6.68□□□□□ -1.34
NPC1-206ENST00000587223 RYBPQ8N488 228 aaPredicted RBP6.68□□□□□ -1.34
NPC1-206ENST00000587223 RNF10Q8N5U6 811 aaKnown RBP6.68□□□□□ -1.34
NPC1-206ENST00000587223 NETO2Q8NC67 525 aa6.68□□□□□ -1.34
NPC1-206ENST00000587223 PCDH19Q8TAB3 1148 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms