RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 RFX5P48382 616 aaPredicted RBP2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 CTXN1P60606 82 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 UBXN2AP68543 259 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 CD69Q07108 199 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 CUL4BQ13620 913 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 KRTAP21-3Q3LHN1 58 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 RUNDC3AQ59EK9 446 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 GPATCH4Q5T3I0 446 aaKnown RBP2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 GPR139Q6DWJ6 353 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 SLC30A10Q6XR72 485 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 TMEM179Q6ZVK1 233 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 USP37Q86T82 979 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 ELOA2Q8IYF1 753 aaPredicted RBP2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 CACNA2D3Q8IZS8 1091 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 CELF5Q8N6W0 485 aaKnown RBP2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 VGLL2Q8N8G2 317 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 REPS2Q8NFH8 660 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 CHURC1Q8WUH1 139 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 RRP36Q96EU6 259 aaKnown RBP2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 VMP1Q96GC9 406 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 TMEM79Q9BSE2 394 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 RTKNQ9BST9 563 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 ALG8Q9BVK2 526 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 MROH8Q9H579 483 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 ACAD9Q9H845 621 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 MYOZ2Q9NPC6 264 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 WASH6PQ9NQA3 447 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 TMEM74BQ9NUR3 256 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 MRGBPQ9NV56 204 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 RBM28Q9NW13 759 aaKnown RBP2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 SLC25A13Q9UJS0 675 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 ZNF215Q9UL58 517 aaPredicted RBP2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 CAPN11Q9UMQ6 739 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 TBC1D3DA0A087WVF3 549 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 TBC1D3IA0A087WXS9 549 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 TBC1D3EA0A087X179 549 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 TBC1D3KA0A087X1G2 549 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 TBC1D3BA6NDS4 549 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 TBC1D3FA6NER0 549 aaPredicted RBP2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 TBC1D3LB9A6J9 549 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 UBE2Q2LH0YL09 131 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 PRKCBP05771 671 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 TBC1D3HP0C7X1 549 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 CYP2C9P11712 490 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 ALOX12P18054 663 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 PRDX5P30044 214 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 KIF5BP33176 963 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 MMP13P45452 471 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 POLD2P49005 469 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 CCR9P51686 369 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 DRG2P55039 364 aaKnown RBP2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 CASP6P55212 293 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 KRT83P78385 493 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 TLE2Q04725 743 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 TRDNQ13061 729 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 TARDBPQ13148 414 aaKnown RBP eCLIP2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 PDCLQ13371 301 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 PTK2BQ14289 1009 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 LAMA4Q16363 1823 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 TMEM266Q2M3C6 531 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 FBXO47Q5MNV8 452 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 UTP14CQ5TAP6 766 aaKnown RBP2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 DCAF12L1Q5VU92 463 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 TBC1D3GQ6DHY5 549 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 TBC1D3CQ6IPX1 549 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 NAA16Q6N069 864 aaPredicted RBP2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 CEP85Q6P2H3 762 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 FBXO42Q6P3S6 717 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 SYT13Q7L8C5 426 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 SESTD1Q86VW0 696 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 ITPRIPQ8IWB1 547 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 TBC1D3Q8IZP1 549 aaPredicted RBP2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 ARL10Q8N8L6 244 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 KBTBD3Q8NAB2 608 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 OR6Y1Q8NGX8 325 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 SLC30A5Q8TAD4 765 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 CSGALNACT1Q8TDX6 532 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 POMGNT1Q8WZA1 660 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 CFHR4Q92496 578 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 VPS50Q96JG6 964 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 CDHR1Q96JP9 859 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 HIST1H2AAQ96QV6 131 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 TRIM5Q9C035 493 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 PREBQ9HCU5 417 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 ING3Q9NXR8 418 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 HOXC10Q9NYD6 342 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 NYAP2Q9P242 653 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 SRP68Q9UHB9 627 aaKnown RBP2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 ZHX1Q9UKY1 873 aaPredicted RBP2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 ZMYND8Q9ULU4 1186 aaPredicted RBP2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 TBC1D30Q9Y2I9 924 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 RPS6KL1Q9Y6S9 549 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 NID2Q14112 1375 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 PFASO15067 1338 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 ERICH2A1L162 156 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 EIF3CLB5ME19 914 aaKnown RBP2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 E7EVH7 732 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 PTGES3LE9PB15 166 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 H7C4K7 107 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms