RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 ATXN2LQ8WWM7 1075 aaKnown RBP10.47□□□□□ -0.73
RFFL-212ENST00000584655 CDKL2Q92772 493 aa10.47□□□□□ -0.73
RFFL-212ENST00000584655 TXLNGYQ9BZA5 131 aa10.47□□□□□ -0.73
RFFL-212ENST00000584655 A0A1W2PQ67 120 aa10.47□□□□□ -0.73
RFFL-212ENST00000584655 LCHNA4D1U4 455 aa10.47□□□□□ -0.73
RFFL-212ENST00000584655 TK2O00142 265 aa10.47□□□□□ -0.73
RFFL-212ENST00000584655 IRAK2O43187 625 aa10.47□□□□□ -0.73
RFFL-212ENST00000584655 SUN1O94901 812 aa10.47□□□□□ -0.73
RFFL-212ENST00000584655 CORO1AP31146 461 aaKnown RBP10.47□□□□□ -0.73
RFFL-212ENST00000584655 PTPN9P43378 593 aa10.47□□□□□ -0.73
RFFL-212ENST00000584655 RAB27AP51159 221 aa10.47□□□□□ -0.73
RFFL-212ENST00000584655 CRYMQ14894 314 aa10.47□□□□□ -0.73
RFFL-212ENST00000584655 PDCD2Q16342 344 aaPredicted RBP10.47□□□□□ -0.73
RFFL-212ENST00000584655 MARC1Q5VT66 337 aa10.47□□□□□ -0.73
RFFL-212ENST00000584655 TMC5Q6UXY8 1006 aa10.47□□□□□ -0.73
RFFL-212ENST00000584655 PLD6Q8N2A8 252 aaKnown RBP10.47□□□□□ -0.73
RFFL-212ENST00000584655 OR52K2Q8NGK3 314 aa10.47□□□□□ -0.73
RFFL-212ENST00000584655 PGM2Q96G03 612 aa10.47□□□□□ -0.73
RFFL-212ENST00000584655 FAM161BQ96MY7 647 aa10.47□□□□□ -0.73
RFFL-212ENST00000584655 ATP13A1Q9HD20 1204 aa10.47□□□□□ -0.73
RFFL-212ENST00000584655 ABCC13Q9NSE7 274 aa10.47□□□□□ -0.73
RFFL-212ENST00000584655 ARL5AQ9Y689 179 aa10.47□□□□□ -0.73
RFFL-212ENST00000584655 ANTXRLA6NF34 631 aa10.47□□□□□ -0.73
RFFL-212ENST00000584655 TCN1P20061 433 aaPredicted RBP10.47□□□□□ -0.73
RFFL-212ENST00000584655 GARSP41250 739 aaKnown RBP10.47□□□□□ -0.73
RFFL-212ENST00000584655 HARS2P49590 506 aaKnown RBP10.47□□□□□ -0.73
RFFL-212ENST00000584655 PRPSAP1Q14558 356 aa10.47□□□□□ -0.73
RFFL-212ENST00000584655 LRRC36Q1X8D7 754 aa10.47□□□□□ -0.73
RFFL-212ENST00000584655 SYDE1Q6ZW31 735 aaPredicted RBP10.47□□□□□ -0.73
RFFL-212ENST00000584655 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.47□□□□□ -0.73
RFFL-212ENST00000584655 STRADAQ7RTN6 431 aa10.47□□□□□ -0.73
RFFL-212ENST00000584655 ZNF75CPQ92670 426 aaPredicted RBP10.47□□□□□ -0.73
RFFL-212ENST00000584655 TLCD1Q96CP7 247 aa10.47□□□□□ -0.73
RFFL-212ENST00000584655 HEY2Q9UBP5 337 aa10.47□□□□□ -0.73
RFFL-212ENST00000584655 L3MBTL1Q9Y468 752 aa10.47□□□□□ -0.73
RFFL-212ENST00000584655 LOXHD1Q8IVV2 1947 aa10.47□□□□□ -0.73
RFFL-212ENST00000584655 ZDBF2Q9HCK1 2354 aa10.46□□□□□ -0.73
RFFL-212ENST00000584655 E9PBE3 544 aa10.46□□□□□ -0.73
RFFL-212ENST00000584655 RFXAPO00287 272 aa10.46□□□□□ -0.73
RFFL-212ENST00000584655 KLHL41O60662 606 aa10.46□□□□□ -0.73
RFFL-212ENST00000584655 URODP06132 367 aa10.46□□□□□ -0.73
RFFL-212ENST00000584655 SNRPAP09012 282 aaKnown RBP10.46□□□□□ -0.73
RFFL-212ENST00000584655 CD68P34810 354 aaPredicted RBP10.46□□□□□ -0.73
RFFL-212ENST00000584655 CDH13P55290 713 aa10.46□□□□□ -0.73
RFFL-212ENST00000584655 WNT3AP56704 352 aa10.46□□□□□ -0.73
RFFL-212ENST00000584655 CREB5Q02930 508 aa10.46□□□□□ -0.73
RFFL-212ENST00000584655 GPNMBQ14956 572 aa10.46□□□□□ -0.73
RFFL-212ENST00000584655 NFE2Q16621 373 aaPredicted RBP10.46□□□□□ -0.73
RFFL-212ENST00000584655 LRRC26Q2I0M4 334 aa10.46□□□□□ -0.73
RFFL-212ENST00000584655 FAM126BQ8IXS8 530 aa10.46□□□□□ -0.73
RFFL-212ENST00000584655 SLAIN1Q8ND83 568 aa10.46□□□□□ -0.73
RFFL-212ENST00000584655 OR13C4Q8NGS5 318 aa10.46□□□□□ -0.73
RFFL-212ENST00000584655 KCTD4Q8WVF5 259 aa10.46□□□□□ -0.73
RFFL-212ENST00000584655 EBNA1BP2Q99848 306 aaKnown RBP10.46□□□□□ -0.73
RFFL-212ENST00000584655 TSSK1BQ9BXA7 367 aa10.46□□□□□ -0.73
RFFL-212ENST00000584655 MANSC1Q9H8J5 431 aa10.46□□□□□ -0.73
RFFL-212ENST00000584655 ECT2Q9H8V3 914 aa10.46□□□□□ -0.73
RFFL-212ENST00000584655 TLK1Q9UKI8 766 aa10.46□□□□□ -0.73
RFFL-212ENST00000584655 NCOR1O75376 2440 aa10.46□□□□□ -0.73
RFFL-212ENST00000584655 ANK1P16157 1881 aa10.46□□□□□ -0.73
RFFL-212ENST00000584655 POLBP06746 335 aa10.46□□□□□ -0.73
RFFL-212ENST00000584655 MYL2P10916 166 aa10.46□□□□□ -0.73
RFFL-212ENST00000584655 HNRNPLP14866 589 aaKnown RBP eCLIP10.46□□□□□ -0.73
RFFL-212ENST00000584655 SERPINB3P29508 390 aa10.46□□□□□ -0.73
RFFL-212ENST00000584655 CDH18Q13634 790 aa10.46□□□□□ -0.73
RFFL-212ENST00000584655 KCNJ11Q14654 390 aa10.46□□□□□ -0.73
RFFL-212ENST00000584655 SETDB1Q15047 1291 aa10.46□□□□□ -0.73
RFFL-212ENST00000584655 KLHL38Q2WGJ6 581 aa10.46□□□□□ -0.73
RFFL-212ENST00000584655 CCSAPQ6IQ19 270 aaPredicted RBP10.46□□□□□ -0.73
RFFL-212ENST00000584655 LAYNQ6UX15 382 aa10.46□□□□□ -0.73
RFFL-212ENST00000584655 PIM3Q86V86 326 aa10.46□□□□□ -0.73
RFFL-212ENST00000584655 SLC26A11Q86WA9 606 aa10.46□□□□□ -0.73
RFFL-212ENST00000584655 RGS18Q9NS28 235 aa10.46□□□□□ -0.73
RFFL-212ENST00000584655 TMEM161AQ9NX61 479 aa10.46□□□□□ -0.73
RFFL-212ENST00000584655 GTSE1Q9NYZ3 720 aa10.46□□□□□ -0.73
RFFL-212ENST00000584655 FARP1Q9Y4F1 1045 aaPredicted RBP10.46□□□□□ -0.73
RFFL-212ENST00000584655 ATP8B3O60423 1300 aa10.46□□□□□ -0.74
RFFL-212ENST00000584655 MYOFQ9NZM1 2061 aa10.46□□□□□ -0.74
RFFL-212ENST00000584655 ERI2A8K979 691 aaKnown RBP10.46□□□□□ -0.74
RFFL-212ENST00000584655 IQCF5A8MTL0 148 aa10.46□□□□□ -0.74
RFFL-212ENST00000584655 KRT38O76015 456 aa10.46□□□□□ -0.74
RFFL-212ENST00000584655 TAC1P20366 129 aa10.46□□□□□ -0.74
RFFL-212ENST00000584655 SERPINB6P35237 376 aa10.46□□□□□ -0.74
RFFL-212ENST00000584655 WASP42768 502 aa10.46□□□□□ -0.74
RFFL-212ENST00000584655 KCNMB4Q86W47 210 aa10.46□□□□□ -0.74
RFFL-212ENST00000584655 HDAC10Q969S8 669 aa10.46□□□□□ -0.74
RFFL-212ENST00000584655 TTC25Q96NG3 672 aa10.46□□□□□ -0.74
RFFL-212ENST00000584655 MLPHQ9BV36 600 aaPredicted RBP10.46□□□□□ -0.74
RFFL-212ENST00000584655 CIPCQ9C0C6 399 aa10.46□□□□□ -0.74
RFFL-212ENST00000584655 KCNU1A8MYU2 1149 aa10.45□□□□□ -0.74
RFFL-212ENST00000584655 HHLA1C9JL84 531 aa10.45□□□□□ -0.74
RFFL-212ENST00000584655 F5H5T6 163 aa10.45□□□□□ -0.74
RFFL-212ENST00000584655 TBL1XO60907 577 aa10.45□□□□□ -0.74
RFFL-212ENST00000584655 CXCL14O95715 111 aa10.45□□□□□ -0.74
RFFL-212ENST00000584655 ZFXP17010 805 aaPredicted RBP10.45□□□□□ -0.74
RFFL-212ENST00000584655 HNRNPH1P31943 449 aaKnown RBP10.45□□□□□ -0.74
RFFL-212ENST00000584655 PEX19P40855 299 aa10.45□□□□□ -0.74
RFFL-212ENST00000584655 CASP2P42575 452 aa10.45□□□□□ -0.74
RFFL-212ENST00000584655 SERPINB4P48594 390 aa10.45□□□□□ -0.74
RFFL-212ENST00000584655 NR1H3Q13133 447 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms