RNA–Protein interactions for RNA: ENST00000584168.5

CDK5RAP3-232, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 2,684 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-232ENST00000584168 DEPDC7Q96QD5 511 aa12.1□□□□□ -0.47
CDK5RAP3-232ENST00000584168 C1orf50Q9BV19 199 aa12.1□□□□□ -0.47
CDK5RAP3-232ENST00000584168 BTBD2Q9BX70 525 aa12.1□□□□□ -0.47
CDK5RAP3-232ENST00000584168 FRMD8Q9BZ67 464 aaPredicted RBP12.1□□□□□ -0.47
CDK5RAP3-232ENST00000584168 AMFRQ9UKV5 643 aa12.1□□□□□ -0.47
CDK5RAP3-232ENST00000584168 NENFQ9UMX5 172 aa12.1□□□□□ -0.47
CDK5RAP3-232ENST00000584168 TMEM5Q9Y2B1 443 aa12.1□□□□□ -0.47
CDK5RAP3-232ENST00000584168 PCDHB13Q9Y5F0 798 aa12.1□□□□□ -0.47
CDK5RAP3-232ENST00000584168 PCDHGA10Q9Y5H3 936 aa12.1□□□□□ -0.47
CDK5RAP3-232ENST00000584168 FRMPD4Q14CM0 1322 aa12.09□□□□□ -0.47
CDK5RAP3-232ENST00000584168 MAGEB16A2A368 324 aa12.09□□□□□ -0.47
CDK5RAP3-232ENST00000584168 MEN1O00255 615 aa12.09□□□□□ -0.47
CDK5RAP3-232ENST00000584168 PDXKO00764 312 aa12.09□□□□□ -0.47
CDK5RAP3-232ENST00000584168 BET1O15155 118 aa12.09□□□□□ -0.47
CDK5RAP3-232ENST00000584168 PDPK1O15530 556 aa12.09□□□□□ -0.47
CDK5RAP3-232ENST00000584168 DYRK3O43781 588 aa12.09□□□□□ -0.47
CDK5RAP3-232ENST00000584168 CDH16O75309 829 aa12.09□□□□□ -0.47
CDK5RAP3-232ENST00000584168 NR3C1P04150 777 aa12.09□□□□□ -0.47
CDK5RAP3-232ENST00000584168 SLC10A3P09131 477 aa12.09□□□□□ -0.47
CDK5RAP3-232ENST00000584168 GABRB3P28472 473 aa12.09□□□□□ -0.47
CDK5RAP3-232ENST00000584168 TRIM23P36406 574 aa12.09□□□□□ -0.47
CDK5RAP3-232ENST00000584168 ARHGDIBP52566 201 aa12.09□□□□□ -0.47
CDK5RAP3-232ENST00000584168 JAM2P57087 298 aa12.09□□□□□ -0.47
CDK5RAP3-232ENST00000584168 ZNF677Q86XU0 584 aa12.09□□□□□ -0.47
CDK5RAP3-232ENST00000584168 HERC6Q8IVU3 1022 aa12.09□□□□□ -0.47
CDK5RAP3-232ENST00000584168 LEMD2Q8NC56 503 aa12.09□□□□□ -0.47
CDK5RAP3-232ENST00000584168 SIMC1Q8NDZ2 872 aa12.09□□□□□ -0.47
CDK5RAP3-232ENST00000584168 SHCBP1Q8NEM2 672 aa12.09□□□□□ -0.47
CDK5RAP3-232ENST00000584168 GRPEL2Q8TAA5 225 aa12.09□□□□□ -0.47
CDK5RAP3-232ENST00000584168 ZNF420Q8TAQ5 688 aaPredicted RBP12.09□□□□□ -0.47
CDK5RAP3-232ENST00000584168 SEPT1Q8WYJ6 367 aa12.09□□□□□ -0.47
CDK5RAP3-232ENST00000584168 SLC35C1Q96A29 364 aa12.09□□□□□ -0.47
CDK5RAP3-232ENST00000584168 WACQ9BTA9 647 aa12.09□□□□□ -0.47
CDK5RAP3-232ENST00000584168 RAD21L1Q9H4I0 556 aa12.09□□□□□ -0.47
CDK5RAP3-232ENST00000584168 AP4S1Q9Y587 144 aa12.09□□□□□ -0.47
CDK5RAP3-232ENST00000584168 A0A0A6YYK5 440 aaPredicted RBP12.09□□□□□ -0.47
CDK5RAP3-232ENST00000584168 ARHGAP42A6NI28 874 aa12.09□□□□□ -0.47
CDK5RAP3-232ENST00000584168 LINC01387J3KSC0 135 aa12.09□□□□□ -0.47
CDK5RAP3-232ENST00000584168 SNAP91O60641 907 aa12.09□□□□□ -0.47
CDK5RAP3-232ENST00000584168 TCEA3O75764 348 aa12.09□□□□□ -0.47
CDK5RAP3-232ENST00000584168 PSMC3P17980 439 aa12.09□□□□□ -0.47
CDK5RAP3-232ENST00000584168 CSTF2P33240 577 aaKnown RBP eCLIP12.09□□□□□ -0.47
CDK5RAP3-232ENST00000584168 HSPA13P48723 471 aa12.09□□□□□ -0.47
CDK5RAP3-232ENST00000584168 RAD51Q06609 339 aa12.09□□□□□ -0.47
CDK5RAP3-232ENST00000584168 DNASE1L3Q13609 305 aa12.09□□□□□ -0.47
CDK5RAP3-232ENST00000584168 TAF1CQ15572 869 aaPredicted RBP12.09□□□□□ -0.47
CDK5RAP3-232ENST00000584168 UGT3A1Q6NUS8 523 aa12.09□□□□□ -0.47
CDK5RAP3-232ENST00000584168 GLYCTKQ8IVS8 523 aa12.09□□□□□ -0.47
CDK5RAP3-232ENST00000584168 SHKBP1Q8TBC3 707 aa12.09□□□□□ -0.47
CDK5RAP3-232ENST00000584168 SLC35G2Q8TBE7 412 aa12.09□□□□□ -0.47
CDK5RAP3-232ENST00000584168 GTF3C2Q8WUA4 911 aaPredicted RBP12.09□□□□□ -0.47
CDK5RAP3-232ENST00000584168 SLC44A1Q8WWI5 657 aa12.09□□□□□ -0.47
CDK5RAP3-232ENST00000584168 SCYL1Q96KG9 808 aa12.09□□□□□ -0.47
CDK5RAP3-232ENST00000584168 TMEM120AQ9BXJ8 343 aa12.09□□□□□ -0.47
CDK5RAP3-232ENST00000584168 CHST12Q9NRB3 414 aa12.09□□□□□ -0.47
CDK5RAP3-232ENST00000584168 TAS2R7Q9NYW3 318 aa12.09□□□□□ -0.47
CDK5RAP3-232ENST00000584168 FNIP2Q9P278 1114 aa12.09□□□□□ -0.47
CDK5RAP3-232ENST00000584168 SNX8Q9Y5X2 465 aa12.09□□□□□ -0.47
CDK5RAP3-232ENST00000584168 MCM3APO60318 1980 aa12.09□□□□□ -0.47
CDK5RAP3-232ENST00000584168 MANSC4A6NHS7 340 aaPredicted RBP12.08□□□□□ -0.48
CDK5RAP3-232ENST00000584168 CSDE1O75534 798 aaKnown RBP12.08□□□□□ -0.48
CDK5RAP3-232ENST00000584168 SEMA3DO95025 777 aa12.08□□□□□ -0.48
CDK5RAP3-232ENST00000584168 GCNT3O95395 438 aa12.08□□□□□ -0.48
CDK5RAP3-232ENST00000584168 ABCB4P21439 1286 aa12.08□□□□□ -0.48
CDK5RAP3-232ENST00000584168 NMT1P30419 496 aaKnown RBP12.08□□□□□ -0.48
CDK5RAP3-232ENST00000584168 CARTPTQ16568 116 aa12.08□□□□□ -0.48
CDK5RAP3-232ENST00000584168 C5orf22Q49AR2 442 aa12.08□□□□□ -0.48
CDK5RAP3-232ENST00000584168 SDE2Q6IQ49 451 aa12.08□□□□□ -0.48
CDK5RAP3-232ENST00000584168 RINT1Q6NUQ1 792 aa12.08□□□□□ -0.48
CDK5RAP3-232ENST00000584168 CCDC60Q8IWA6 550 aaPredicted RBP12.08□□□□□ -0.48
CDK5RAP3-232ENST00000584168 CADM2Q8N3J6 435 aa12.08□□□□□ -0.48
CDK5RAP3-232ENST00000584168 FANK1Q8TC84 345 aa12.08□□□□□ -0.48
CDK5RAP3-232ENST00000584168 GRIN3AQ8TCU5 1115 aa12.08□□□□□ -0.48
CDK5RAP3-232ENST00000584168 KCTD4Q8WVF5 259 aa12.08□□□□□ -0.48
CDK5RAP3-232ENST00000584168 JPH3Q8WXH2 748 aaPredicted RBP12.08□□□□□ -0.48
CDK5RAP3-232ENST00000584168 ZNF668Q96K58 619 aaPredicted RBP12.08□□□□□ -0.48
CDK5RAP3-232ENST00000584168 SNX18Q96RF0 628 aa12.08□□□□□ -0.48
CDK5RAP3-232ENST00000584168 DOK1Q99704 481 aa12.08□□□□□ -0.48
CDK5RAP3-232ENST00000584168 CPNE7Q9UBL6 633 aa12.08□□□□□ -0.48
CDK5RAP3-232ENST00000584168 ANAPC5Q9UJX4 755 aa12.08□□□□□ -0.48
CDK5RAP3-232ENST00000584168 MKI67P46013 3256 aaKnown RBP12.08□□□□□ -0.48
CDK5RAP3-232ENST00000584168 C12orf71A8MTZ7 269 aa12.08□□□□□ -0.48
CDK5RAP3-232ENST00000584168 MAN1A2O60476 641 aa12.08□□□□□ -0.48
CDK5RAP3-232ENST00000584168 KRT7P08729 469 aa12.08□□□□□ -0.48
CDK5RAP3-232ENST00000584168 FGFR1P11362 822 aa12.08□□□□□ -0.48
CDK5RAP3-232ENST00000584168 SERPINB1P30740 379 aa12.08□□□□□ -0.48
CDK5RAP3-232ENST00000584168 STAT1P42224 750 aa12.08□□□□□ -0.48
CDK5RAP3-232ENST00000584168 ARHGDIAP52565 204 aa12.08□□□□□ -0.48
CDK5RAP3-232ENST00000584168 GHRHRQ02643 423 aa12.08□□□□□ -0.48
CDK5RAP3-232ENST00000584168 ENPEPQ07075 957 aa12.08□□□□□ -0.48
CDK5RAP3-232ENST00000584168 PON2Q15165 354 aa12.08□□□□□ -0.48
CDK5RAP3-232ENST00000584168 TAF5Q15542 800 aa12.08□□□□□ -0.48
CDK5RAP3-232ENST00000584168 RARS2Q5T160 578 aaKnown RBP12.08□□□□□ -0.48
CDK5RAP3-232ENST00000584168 B3GNT9Q6UX72 402 aa12.08□□□□□ -0.48
CDK5RAP3-232ENST00000584168 DBX2Q6ZNG2 339 aa12.08□□□□□ -0.48
CDK5RAP3-232ENST00000584168 PCGF5Q86SE9 256 aa12.08□□□□□ -0.48
CDK5RAP3-232ENST00000584168 LNX1Q8TBB1 728 aaPredicted RBP12.08□□□□□ -0.48
CDK5RAP3-232ENST00000584168 MARC2Q969Z3 335 aa12.08□□□□□ -0.48
CDK5RAP3-232ENST00000584168 BTBD6Q96KE9 485 aa12.08□□□□□ -0.48
CDK5RAP3-232ENST00000584168 ERVK-5Q9HDB9 667 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms