RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 POM121L1PQ3SYA9 428 aa20.89■□□□□ 0.93
SS18-224ENST00000584083 PLEKHA7Q6IQ23 1121 aa20.89■□□□□ 0.93
SS18-224ENST00000584083 PSAPL1Q6NUJ1 521 aa20.89■□□□□ 0.93
SS18-224ENST00000584083 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.89■□□□□ 0.93
SS18-224ENST00000584083 PYROXD2Q8N2H3 581 aa20.89■□□□□ 0.93
SS18-224ENST00000584083 OR2T34Q8NGX1 318 aa20.89■□□□□ 0.93
SS18-224ENST00000584083 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.89■□□□□ 0.93
SS18-224ENST00000584083 ZDHHC5Q9C0B5 715 aa20.89■□□□□ 0.93
SS18-224ENST00000584083 TMEM248Q9NWD8 314 aa20.89■□□□□ 0.93
SS18-224ENST00000584083 CNOT8Q9UFF9 292 aaKnown RBP20.89■□□□□ 0.93
SS18-224ENST00000584083 SARDHQ9UL12 918 aa20.89■□□□□ 0.93
SS18-224ENST00000584083 BZW2Q9Y6E2 419 aaKnown RBP20.89■□□□□ 0.93
SS18-224ENST00000584083 CHD5Q8TDI0 1954 aa20.88■□□□□ 0.93
SS18-224ENST00000584083 PLK4O00444 970 aa20.88■□□□□ 0.93
SS18-224ENST00000584083 OPHN1O60890 802 aa20.88■□□□□ 0.93
SS18-224ENST00000584083 KCNK5O95279 499 aa20.88■□□□□ 0.93
SS18-224ENST00000584083 TPM3P06753 285 aa20.88■□□□□ 0.93
SS18-224ENST00000584083 CD27P26842 260 aa20.88■□□□□ 0.93
SS18-224ENST00000584083 ACVRL1P37023 503 aa20.88■□□□□ 0.93
SS18-224ENST00000584083 RECQLP46063 649 aaPredicted RBP20.88■□□□□ 0.93
SS18-224ENST00000584083 NOVA1P51513 510 aaKnown RBP20.88■□□□□ 0.93
SS18-224ENST00000584083 METAP1P53582 386 aa20.88■□□□□ 0.93
SS18-224ENST00000584083 ZBED6P86452 979 aa20.88■□□□□ 0.93
SS18-224ENST00000584083 SLC20A2Q08357 652 aa20.88■□□□□ 0.93
SS18-224ENST00000584083 GRIK2Q13002 908 aa20.88■□□□□ 0.93
SS18-224ENST00000584083 NLRP14Q86W24 1093 aa20.88■□□□□ 0.93
SS18-224ENST00000584083 C1orf216Q8TAB5 229 aa20.88■□□□□ 0.93
SS18-224ENST00000584083 PIP4K2CQ8TBX8 421 aa20.88■□□□□ 0.93
SS18-224ENST00000584083 SYN2Q92777 582 aaPredicted RBP20.88■□□□□ 0.93
SS18-224ENST00000584083 ZNF653Q96CK0 615 aa20.88■□□□□ 0.93
SS18-224ENST00000584083 IQCDQ96DY2 449 aa20.88■□□□□ 0.93
SS18-224ENST00000584083 TRIM11Q96F44 468 aa20.88■□□□□ 0.93
SS18-224ENST00000584083 TNKS2Q9H2K2 1166 aa20.88■□□□□ 0.93
SS18-224ENST00000584083 NDFIP2Q9NV92 336 aa20.88■□□□□ 0.93
SS18-224ENST00000584083 MYO1AQ9UBC5 1043 aa20.88■□□□□ 0.93
SS18-224ENST00000584083 PPM1HQ9ULR3 514 aa20.88■□□□□ 0.93
SS18-224ENST00000584083 FZD10Q9ULW2 581 aa20.88■□□□□ 0.93
SS18-224ENST00000584083 CAPN11Q9UMQ6 739 aa20.88■□□□□ 0.93
SS18-224ENST00000584083 LUC7L2Q9Y383 392 aaKnown RBP20.88■□□□□ 0.93
SS18-224ENST00000584083 CREB3O43889 395 aa20.87■□□□□ 0.93
SS18-224ENST00000584083 ZMPSTE24O75844 475 aa20.87■□□□□ 0.93
SS18-224ENST00000584083 IGHV4-34P06331 123 aa20.87■□□□□ 0.93
SS18-224ENST00000584083 EPHB2P29323 1055 aa20.87■□□□□ 0.93
SS18-224ENST00000584083 DRD3P35462 400 aa20.87■□□□□ 0.93
SS18-224ENST00000584083 CSNK1EP49674 416 aaKnown RBP20.87■□□□□ 0.93
SS18-224ENST00000584083 AFF3P51826 1226 aaKnown RBP20.87■□□□□ 0.93
SS18-224ENST00000584083 ADPRHP54922 357 aa20.87■□□□□ 0.93
SS18-224ENST00000584083 AIF1P55008 147 aa20.87■□□□□ 0.93
SS18-224ENST00000584083 TEAD4Q15561 434 aa20.87■□□□□ 0.93
SS18-224ENST00000584083 C22orf39Q6P5X5 142 aa20.87■□□□□ 0.93
SS18-224ENST00000584083 VPS36Q86VN1 386 aa20.87■□□□□ 0.93
SS18-224ENST00000584083 OR2A12Q8NGT7 310 aa20.87■□□□□ 0.93
SS18-224ENST00000584083 ARHGEF2Q92974 986 aaKnown RBP20.87■□□□□ 0.93
SS18-224ENST00000584083 EPAS1Q99814 870 aa20.87■□□□□ 0.93
SS18-224ENST00000584083 ACE2Q9BYF1 805 aaPredicted RBP20.87■□□□□ 0.93
SS18-224ENST00000584083 XPO4Q9C0E2 1151 aaKnown RBP20.87■□□□□ 0.93
SS18-224ENST00000584083 TSPY26PQ9H489 355 aa20.87■□□□□ 0.93
SS18-224ENST00000584083 TM9SF3Q9HD45 589 aa20.87■□□□□ 0.93
SS18-224ENST00000584083 HPCAL4Q9UM19 191 aa20.87■□□□□ 0.93
SS18-224ENST00000584083 SLCO1B1Q9Y6L6 691 aa20.87■□□□□ 0.93
SS18-224ENST00000584083 PLXNA2O75051 1894 aa20.87■□□□□ 0.93
SS18-224ENST00000584083 TBC1D3DA0A087WVF3 549 aa20.86■□□□□ 0.93
SS18-224ENST00000584083 TBC1D3IA0A087WXS9 549 aa20.86■□□□□ 0.93
SS18-224ENST00000584083 TBC1D3EA0A087X179 549 aa20.86■□□□□ 0.93
SS18-224ENST00000584083 TBC1D3KA0A087X1G2 549 aa20.86■□□□□ 0.93
SS18-224ENST00000584083 A0A1B0GVT2 93 aa20.86■□□□□ 0.93
SS18-224ENST00000584083 TBC1D3FA6NER0 549 aaPredicted RBP20.86■□□□□ 0.93
SS18-224ENST00000584083 TMEM191CA6NGB0 347 aa20.86■□□□□ 0.93
SS18-224ENST00000584083 TBC1D3LB9A6J9 549 aa20.86■□□□□ 0.93
SS18-224ENST00000584083 RAMP2O60895 175 aa20.86■□□□□ 0.93
SS18-224ENST00000584083 RNF8O76064 485 aa20.86■□□□□ 0.93
SS18-224ENST00000584083 SERPING1P05155 500 aa20.86■□□□□ 0.93
SS18-224ENST00000584083 TBC1D3HP0C7X1 549 aa20.86■□□□□ 0.93
SS18-224ENST00000584083 CHRNA3P32297 505 aa20.86■□□□□ 0.93
SS18-224ENST00000584083 SERPINH1P50454 418 aaKnown RBP20.86■□□□□ 0.93
SS18-224ENST00000584083 DNA2P51530 1060 aa20.86■□□□□ 0.93
SS18-224ENST00000584083 ARF5P84085 180 aa20.86■□□□□ 0.93
SS18-224ENST00000584083 POLD3Q15054 466 aaPredicted RBP20.86■□□□□ 0.93
SS18-224ENST00000584083 TBC1D3GQ6DHY5 549 aa20.86■□□□□ 0.93
SS18-224ENST00000584083 TBC1D3CQ6IPX1 549 aa20.86■□□□□ 0.93
SS18-224ENST00000584083 ZNF354CQ86Y25 554 aa20.86■□□□□ 0.93
SS18-224ENST00000584083 TBC1D3Q8IZP1 549 aaPredicted RBP20.86■□□□□ 0.93
SS18-224ENST00000584083 MAGEH1Q9H213 219 aa20.86■□□□□ 0.93
SS18-224ENST00000584083 NEU3Q9UQ49 428 aa20.86■□□□□ 0.93
SS18-224ENST00000584083 SCINQ9Y6U3 715 aa20.86■□□□□ 0.93
SS18-224ENST00000584083 KNL1Q8NG31 2342 aa20.86■□□□□ 0.93
SS18-224ENST00000584083 KPNA3O00505 521 aaPredicted RBP20.85■□□□□ 0.93
SS18-224ENST00000584083 GIPC1O14908 333 aa20.85■□□□□ 0.93
SS18-224ENST00000584083 ADRB1P08588 477 aa20.85■□□□□ 0.93
SS18-224ENST00000584083 MYBL1P10243 752 aa20.85■□□□□ 0.93
SS18-224ENST00000584083 CSRP1P21291 193 aaKnown RBP20.85■□□□□ 0.93
SS18-224ENST00000584083 CNTN1Q12860 1018 aa20.85■□□□□ 0.93
SS18-224ENST00000584083 SEMA3BQ13214 749 aa20.85■□□□□ 0.93
SS18-224ENST00000584083 NFKBIBQ15653 356 aa20.85■□□□□ 0.93
SS18-224ENST00000584083 N4BP2L1Q5TBK1 243 aaPredicted RBP20.85■□□□□ 0.93
SS18-224ENST00000584083 HGSNATQ68CP4 663 aa20.85■□□□□ 0.93
SS18-224ENST00000584083 ADAT2Q7Z6V5 191 aaKnown RBP20.85■□□□□ 0.93
SS18-224ENST00000584083 RTL3Q8N8U3 475 aaKnown RBP20.85■□□□□ 0.93
SS18-224ENST00000584083 CHST14Q8NCH0 376 aa20.85■□□□□ 0.93
SS18-224ENST00000584083 DEFB124Q8NES8 71 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms