RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 LUC7L3O95232 432 aaKnown RBP11.84□□□□□ -0.51
CDK5RAP3-231ENST00000584063 NPTXRO95502 500 aa11.84□□□□□ -0.51
CDK5RAP3-231ENST00000584063 HMGCRP04035 888 aa11.84□□□□□ -0.51
CDK5RAP3-231ENST00000584063 TMEM11P17152 192 aa11.84□□□□□ -0.51
CDK5RAP3-231ENST00000584063 GPD2P43304 727 aa11.84□□□□□ -0.51
CDK5RAP3-231ENST00000584063 PGGT1BP53609 377 aa11.84□□□□□ -0.51
CDK5RAP3-231ENST00000584063 RELQ04864 619 aaPredicted RBP11.84□□□□□ -0.51
CDK5RAP3-231ENST00000584063 PRKCZQ05513 592 aa11.84□□□□□ -0.51
CDK5RAP3-231ENST00000584063 LRRC38Q5VT99 294 aa11.84□□□□□ -0.51
CDK5RAP3-231ENST00000584063 SLC2A7Q6PXP3 512 aa11.84□□□□□ -0.51
CDK5RAP3-231ENST00000584063 CES3Q6UWW8 571 aa11.84□□□□□ -0.51
CDK5RAP3-231ENST00000584063 BBS12Q6ZW61 710 aa11.84□□□□□ -0.51
CDK5RAP3-231ENST00000584063 IL17RDQ8NFM7 739 aa11.84□□□□□ -0.51
CDK5RAP3-231ENST00000584063 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.84□□□□□ -0.51
CDK5RAP3-231ENST00000584063 PYDC1Q8WXC3 89 aa11.84□□□□□ -0.51
CDK5RAP3-231ENST00000584063 NDRG1Q92597 394 aaKnown RBP11.84□□□□□ -0.51
CDK5RAP3-231ENST00000584063 PDZD7Q9H5P4 517 aa11.84□□□□□ -0.51
CDK5RAP3-231ENST00000584063 ARHGEF4Q9NR80 690 aa11.84□□□□□ -0.51
CDK5RAP3-231ENST00000584063 STOML1Q9UBI4 398 aa11.84□□□□□ -0.51
CDK5RAP3-231ENST00000584063 GJD2Q9UKL4 321 aa11.84□□□□□ -0.51
CDK5RAP3-231ENST00000584063 PIN4Q9Y237 131 aaKnown RBP11.84□□□□□ -0.51
CDK5RAP3-231ENST00000584063 CILPO75339 1184 aa11.83□□□□□ -0.52
CDK5RAP3-231ENST00000584063 GABBR2O75899 941 aa11.83□□□□□ -0.52
CDK5RAP3-231ENST00000584063 WFS1O76024 890 aa11.83□□□□□ -0.52
CDK5RAP3-231ENST00000584063 CSH1P0DML2 217 aa11.83□□□□□ -0.52
CDK5RAP3-231ENST00000584063 CSH2P0DML3 217 aa11.83□□□□□ -0.52
CDK5RAP3-231ENST00000584063 ETS2P15036 469 aa11.83□□□□□ -0.52
CDK5RAP3-231ENST00000584063 VHLP40337 213 aa11.83□□□□□ -0.52
CDK5RAP3-231ENST00000584063 ETV4P43268 484 aa11.83□□□□□ -0.52
CDK5RAP3-231ENST00000584063 RABGGTBP53611 331 aa11.83□□□□□ -0.52
CDK5RAP3-231ENST00000584063 ATXN3P54252 364 aaPredicted RBP11.83□□□□□ -0.52
CDK5RAP3-231ENST00000584063 PRKD1Q15139 912 aaPredicted RBP11.83□□□□□ -0.52
CDK5RAP3-231ENST00000584063 HADHQ16836 314 aaKnown RBP11.83□□□□□ -0.52
CDK5RAP3-231ENST00000584063 KLHL38Q2WGJ6 581 aa11.83□□□□□ -0.52
CDK5RAP3-231ENST00000584063 WASHC2DQ5SRD0 308 aa11.83□□□□□ -0.52
CDK5RAP3-231ENST00000584063 VWA5B1Q5TIE3 1220 aa11.83□□□□□ -0.52
CDK5RAP3-231ENST00000584063 FOXB2Q5VYV0 432 aa11.83□□□□□ -0.52
CDK5RAP3-231ENST00000584063 CASC4Q6P4E1 433 aa11.83□□□□□ -0.52
CDK5RAP3-231ENST00000584063 DRICH1Q6PGQ1 229 aaPredicted RBP11.83□□□□□ -0.52
CDK5RAP3-231ENST00000584063 SCUBE3Q8IX30 993 aa11.83□□□□□ -0.52
CDK5RAP3-231ENST00000584063 NIPA2Q8N8Q9 360 aa11.83□□□□□ -0.52
CDK5RAP3-231ENST00000584063 EMID1Q96A84 441 aaPredicted RBP11.83□□□□□ -0.52
CDK5RAP3-231ENST00000584063 TMEM176AQ96HP8 235 aa11.83□□□□□ -0.52
CDK5RAP3-231ENST00000584063 MRPL45Q9BRJ2 306 aaKnown RBP11.83□□□□□ -0.52
CDK5RAP3-231ENST00000584063 SNTG2Q9NY99 539 aa11.83□□□□□ -0.52
CDK5RAP3-231ENST00000584063 TSPAN16Q9UKR8 245 aa11.83□□□□□ -0.52
CDK5RAP3-231ENST00000584063 TNFSF13BQ9Y275 285 aa11.83□□□□□ -0.52
CDK5RAP3-231ENST00000584063 TLL2Q9Y6L7 1015 aa11.83□□□□□ -0.52
CDK5RAP3-231ENST00000584063 PLXNB2O15031 1838 aa11.83□□□□□ -0.52
CDK5RAP3-231ENST00000584063 PFKMP08237 780 aa11.83□□□□□ -0.52
CDK5RAP3-231ENST00000584063 PRKAR2AP13861 404 aaKnown RBP11.83□□□□□ -0.52
CDK5RAP3-231ENST00000584063 CD1EP15812 388 aa11.83□□□□□ -0.52
CDK5RAP3-231ENST00000584063 PDGFRAP16234 1089 aa11.83□□□□□ -0.52
CDK5RAP3-231ENST00000584063 CPT1AP50416 773 aa11.83□□□□□ -0.52
CDK5RAP3-231ENST00000584063 MSLNQ13421 630 aaPredicted RBP11.83□□□□□ -0.52
CDK5RAP3-231ENST00000584063 OLIG2Q13516 323 aa11.83□□□□□ -0.52
CDK5RAP3-231ENST00000584063 PPA1Q15181 289 aa11.83□□□□□ -0.52
CDK5RAP3-231ENST00000584063 RALGPS1Q5JS13 557 aa11.83□□□□□ -0.52
CDK5RAP3-231ENST00000584063 RGS9BPQ6ZS82 235 aa11.83□□□□□ -0.52
CDK5RAP3-231ENST00000584063 ACOT1Q86TX2 421 aa11.83□□□□□ -0.52
CDK5RAP3-231ENST00000584063 SPNS2Q8IVW8 549 aa11.83□□□□□ -0.52
CDK5RAP3-231ENST00000584063 GSTCDQ8NEC7 633 aa11.83□□□□□ -0.52
CDK5RAP3-231ENST00000584063 TRIB2Q92519 343 aa11.83□□□□□ -0.52
CDK5RAP3-231ENST00000584063 DTNBP1Q96EV8 351 aa11.83□□□□□ -0.52
CDK5RAP3-231ENST00000584063 KIF12Q96FN5 646 aa11.83□□□□□ -0.52
CDK5RAP3-231ENST00000584063 APOPT1Q96IL0 206 aa11.83□□□□□ -0.52
CDK5RAP3-231ENST00000584063 HPDLQ96IR7 371 aa11.83□□□□□ -0.52
CDK5RAP3-231ENST00000584063 EIF2AQ9BY44 585 aaKnown RBP11.83□□□□□ -0.52
CDK5RAP3-231ENST00000584063 BCO2Q9BYV7 579 aa11.83□□□□□ -0.52
CDK5RAP3-231ENST00000584063 TMPRSS4Q9NRS4 437 aa11.83□□□□□ -0.52
CDK5RAP3-231ENST00000584063 SYNJ2BP-COX16A0A087WUM0 186 aa11.82□□□□□ -0.52
CDK5RAP3-231ENST00000584063 IQANK1A0A1B0GTG1 560 aa11.82□□□□□ -0.52
CDK5RAP3-231ENST00000584063 ENPP3O14638 875 aa11.82□□□□□ -0.52
CDK5RAP3-231ENST00000584063 OLFM2O95897 454 aa11.82□□□□□ -0.52
CDK5RAP3-231ENST00000584063 MLH1P40692 756 aa11.82□□□□□ -0.52
CDK5RAP3-231ENST00000584063 RPL10AP62906 217 aaKnown RBP11.82□□□□□ -0.52
CDK5RAP3-231ENST00000584063 SGCGQ13326 291 aa11.82□□□□□ -0.52
CDK5RAP3-231ENST00000584063 KRT81Q14533 505 aa11.82□□□□□ -0.52
CDK5RAP3-231ENST00000584063 SSPNQ14714 243 aa11.82□□□□□ -0.52
CDK5RAP3-231ENST00000584063 TWF2Q6IBS0 349 aaKnown RBP11.82□□□□□ -0.52
CDK5RAP3-231ENST00000584063 PMF1Q6P1K2 205 aa11.82□□□□□ -0.52
CDK5RAP3-231ENST00000584063 RIPOR1Q6ZS17 1223 aa11.82□□□□□ -0.52
CDK5RAP3-231ENST00000584063 NUDCD3Q8IVD9 361 aa11.82□□□□□ -0.52
CDK5RAP3-231ENST00000584063 ENDOVQ8N8Q3 282 aaKnown RBP11.82□□□□□ -0.52
CDK5RAP3-231ENST00000584063 TMEM40Q8WWA1 233 aa11.82□□□□□ -0.52
CDK5RAP3-231ENST00000584063 GCOM2Q9BZD3 368 aaPredicted RBP11.82□□□□□ -0.52
CDK5RAP3-231ENST00000584063 DPEP3Q9H4B8 488 aa11.82□□□□□ -0.52
CDK5RAP3-231ENST00000584063 CRLF2Q9HC73 371 aa11.82□□□□□ -0.52
CDK5RAP3-231ENST00000584063 CD93Q9NPY3 652 aa11.82□□□□□ -0.52
CDK5RAP3-231ENST00000584063 COX16Q9P0S2 106 aa11.82□□□□□ -0.52
CDK5RAP3-231ENST00000584063 PPM1HQ9ULR3 514 aa11.82□□□□□ -0.52
CDK5RAP3-231ENST00000584063 PLXNA1Q9UIW2 1896 aa11.82□□□□□ -0.52
CDK5RAP3-231ENST00000584063 NRCAMQ92823 1304 aa11.82□□□□□ -0.52
CDK5RAP3-231ENST00000584063 GOLGA8TH3BQL2 631 aa11.82□□□□□ -0.52
CDK5RAP3-231ENST00000584063 MAP3K7O43318 606 aa11.82□□□□□ -0.52
CDK5RAP3-231ENST00000584063 CA12O43570 354 aa11.82□□□□□ -0.52
CDK5RAP3-231ENST00000584063 ITM2AO43736 263 aa11.82□□□□□ -0.52
CDK5RAP3-231ENST00000584063 PRKACBP22694 351 aa11.82□□□□□ -0.52
CDK5RAP3-231ENST00000584063 IGFBP6P24592 240 aaPredicted RBP11.82□□□□□ -0.52
CDK5RAP3-231ENST00000584063 PSEN2P49810 448 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms