RNA–Protein interactions for RNA: ENST00000583821.1

MSI2-218, Transcript of musashi RNA binding protein 2, humanhuman

TSL 3

Gene MSI2, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-218ENST00000583821 BNIP3Q12983 259 aa8.32□□□□□ -1.08
MSI2-218ENST00000583821 EIF4EBP2Q13542 120 aaPredicted RBP8.32□□□□□ -1.08
MSI2-218ENST00000583821 SMAD1Q15797 465 aaKnown RBP8.32□□□□□ -1.08
MSI2-218ENST00000583821 SOWAHCQ53LP3 525 aaPredicted RBP8.32□□□□□ -1.08
MSI2-218ENST00000583821 FBXL22Q6P050 247 aa8.32□□□□□ -1.08
MSI2-218ENST00000583821 TRIM65Q6PJ69 517 aa8.32□□□□□ -1.08
MSI2-218ENST00000583821 Q6ZVU0 165 aa8.32□□□□□ -1.08
MSI2-218ENST00000583821 SND1Q7KZF4 910 aaKnown RBP eCLIP8.32□□□□□ -1.08
MSI2-218ENST00000583821 C14orf80Q86SX3 495 aa8.32□□□□□ -1.08
MSI2-218ENST00000583821 TMEM110Q86TL2 294 aa8.32□□□□□ -1.08
MSI2-218ENST00000583821 SPATS2Q86XZ4 545 aaKnown RBP8.32□□□□□ -1.08
MSI2-218ENST00000583821 CCDC117Q8IWD4 279 aaPredicted RBP8.32□□□□□ -1.08
MSI2-218ENST00000583821 CCDC116Q8IYX3 515 aa8.32□□□□□ -1.08
MSI2-218ENST00000583821 EID2Q8N6I1 236 aa8.32□□□□□ -1.08
MSI2-218ENST00000583821 ATP6V0D2Q8N8Y2 350 aa8.32□□□□□ -1.08
MSI2-218ENST00000583821 KDM1BQ8NB78 822 aa8.32□□□□□ -1.08
MSI2-218ENST00000583821 C1orf131Q8NDD1 294 aaKnown RBP8.32□□□□□ -1.08
MSI2-218ENST00000583821 SAP25Q8TEE9 199 aa8.32□□□□□ -1.08
MSI2-218ENST00000583821 FRS2Q8WU20 508 aa8.32□□□□□ -1.08
MSI2-218ENST00000583821 ALG14Q96F25 216 aa8.32□□□□□ -1.08
MSI2-218ENST00000583821 LRIG1Q96JA1 1093 aa8.32□□□□□ -1.08
MSI2-218ENST00000583821 SERAC1Q96JX3 654 aa8.32□□□□□ -1.08
MSI2-218ENST00000583821 CNDP2Q96KP4 475 aaKnown RBP8.32□□□□□ -1.08
MSI2-218ENST00000583821 BBC3Q96PG8 261 aaPredicted RBP8.32□□□□□ -1.08
MSI2-218ENST00000583821 SLC2A13Q96QE2 648 aa8.32□□□□□ -1.08
MSI2-218ENST00000583821 MED15Q96RN5 788 aa8.32□□□□□ -1.08
MSI2-218ENST00000583821 ELF4Q99607 663 aaPredicted RBP8.32□□□□□ -1.08
MSI2-218ENST00000583821 MYOCQ99972 504 aa8.32□□□□□ -1.08
MSI2-218ENST00000583821 THAP9Q9H5L6 903 aa8.32□□□□□ -1.08
MSI2-218ENST00000583821 PLCB1Q9NQ66 1216 aa8.32□□□□□ -1.08
MSI2-218ENST00000583821 ANLNQ9NQW6 1124 aa8.32□□□□□ -1.08
MSI2-218ENST00000583821 VANGL2Q9ULK5 521 aa8.32□□□□□ -1.08
MSI2-218ENST00000583821 SCML1Q9UN30 329 aa8.32□□□□□ -1.08
MSI2-218ENST00000583821 LRRK1Q38SD2 2015 aa8.32□□□□□ -1.08
MSI2-218ENST00000583821 TBC1D3DA0A087WVF3 549 aa8.31□□□□□ -1.08
MSI2-218ENST00000583821 TBC1D3IA0A087WXS9 549 aa8.31□□□□□ -1.08
MSI2-218ENST00000583821 TBC1D3EA0A087X179 549 aa8.31□□□□□ -1.08
MSI2-218ENST00000583821 TBC1D3KA0A087X1G2 549 aa8.31□□□□□ -1.08
MSI2-218ENST00000583821 A0A1B0GVM2 712 aa8.31□□□□□ -1.08
MSI2-218ENST00000583821 TBC1D3FA6NER0 549 aaPredicted RBP8.31□□□□□ -1.08
MSI2-218ENST00000583821 TCAF2A6NFQ2 919 aa8.31□□□□□ -1.08
MSI2-218ENST00000583821 TBC1D3LB9A6J9 549 aa8.31□□□□□ -1.08
MSI2-218ENST00000583821 I6L893 689 aaPredicted RBP8.31□□□□□ -1.08
MSI2-218ENST00000583821 MED7O43513 233 aa8.31□□□□□ -1.08
MSI2-218ENST00000583821 BNIP3LO60238 219 aa8.31□□□□□ -1.08
MSI2-218ENST00000583821 SDC3O75056 442 aa8.31□□□□□ -1.08
MSI2-218ENST00000583821 CNTN5O94779 1100 aa8.31□□□□□ -1.08
MSI2-218ENST00000583821 LDOC1O95751 146 aaPredicted RBP8.31□□□□□ -1.08
MSI2-218ENST00000583821 ITGAVP06756 1048 aa8.31□□□□□ -1.08
MSI2-218ENST00000583821 TBC1D3HP0C7X1 549 aa8.31□□□□□ -1.08
MSI2-218ENST00000583821 SNRPBP14678 240 aaKnown RBP8.31□□□□□ -1.08
MSI2-218ENST00000583821 PRLRP16471 622 aa8.31□□□□□ -1.08
MSI2-218ENST00000583821 C5AR1P21730 350 aa8.31□□□□□ -1.08
MSI2-218ENST00000583821 ACADVLP49748 655 aa8.31□□□□□ -1.08
MSI2-218ENST00000583821 CDK17Q00537 523 aa8.31□□□□□ -1.08
MSI2-218ENST00000583821 NME3Q13232 169 aa8.31□□□□□ -1.08
MSI2-218ENST00000583821 AUHQ13825 339 aaKnown RBP8.31□□□□□ -1.08
MSI2-218ENST00000583821 ELAVL3Q14576 367 aaKnown RBP8.31□□□□□ -1.08
MSI2-218ENST00000583821 MEA1Q16626 185 aa8.31□□□□□ -1.08
MSI2-218ENST00000583821 INAVAQ3KP66 663 aa8.31□□□□□ -1.08
MSI2-218ENST00000583821 RABGAP1LQ5R372 815 aa8.31□□□□□ -1.08
MSI2-218ENST00000583821 AGBL4Q5VU57 503 aa8.31□□□□□ -1.08
MSI2-218ENST00000583821 TBC1D3GQ6DHY5 549 aa8.31□□□□□ -1.08
MSI2-218ENST00000583821 TBC1D3CQ6IPX1 549 aa8.31□□□□□ -1.08
MSI2-218ENST00000583821 NAPEPLDQ6IQ20 393 aa8.31□□□□□ -1.08
MSI2-218ENST00000583821 OLFML1Q6UWY5 402 aa8.31□□□□□ -1.08
MSI2-218ENST00000583821 BEND5Q7L4P6 421 aa8.31□□□□□ -1.08
MSI2-218ENST00000583821 CREBRFQ8IUR6 639 aa8.31□□□□□ -1.08
MSI2-218ENST00000583821 TBC1D3Q8IZP1 549 aaPredicted RBP8.31□□□□□ -1.08
MSI2-218ENST00000583821 GALNT15Q8N3T1 639 aa8.31□□□□□ -1.08
MSI2-218ENST00000583821 STK32AQ8WU08 396 aa8.31□□□□□ -1.08
MSI2-218ENST00000583821 KLK6Q92876 244 aa8.31□□□□□ -1.08
MSI2-218ENST00000583821 RNF34Q969K3 372 aa8.31□□□□□ -1.08
MSI2-218ENST00000583821 PPP1R13BQ96KQ4 1090 aa8.31□□□□□ -1.08
MSI2-218ENST00000583821 RPRD1AQ96P16 312 aaPredicted RBP8.31□□□□□ -1.08
MSI2-218ENST00000583821 SIX2Q9NPC8 291 aa8.31□□□□□ -1.08
MSI2-218ENST00000583821 GDF3Q9NR23 364 aa8.31□□□□□ -1.08
MSI2-218ENST00000583821 PIGVQ9NUD9 493 aa8.31□□□□□ -1.08
MSI2-218ENST00000583821 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.31□□□□□ -1.08
MSI2-218ENST00000583821 ARHGAP20Q9P2F6 1191 aa8.31□□□□□ -1.08
MSI2-218ENST00000583821 VPS28Q9UK41 221 aa8.31□□□□□ -1.08
MSI2-218ENST00000583821 HS3ST4Q9Y661 456 aa8.31□□□□□ -1.08
MSI2-218ENST00000583821 KIF26BQ2KJY2 2108 aa8.3□□□□□ -1.08
MSI2-218ENST00000583821 BOD1L1Q8NFC6 3051 aa8.3□□□□□ -1.08
MSI2-218ENST00000583821 K7ERQ8 282 aa8.3□□□□□ -1.08
MSI2-218ENST00000583821 ERVH48-1M5A8F1 160 aa8.3□□□□□ -1.08
MSI2-218ENST00000583821 TLR4O00206 839 aa8.3□□□□□ -1.08
MSI2-218ENST00000583821 LATO43561 262 aa8.3□□□□□ -1.08
MSI2-218ENST00000583821 PLRG1O43660 514 aaKnown RBP8.3□□□□□ -1.08
MSI2-218ENST00000583821 SNAP91O60641 907 aa8.3□□□□□ -1.08
MSI2-218ENST00000583821 HSF2BPO75031 334 aa8.3□□□□□ -1.08
MSI2-218ENST00000583821 PAGE1O75459 146 aa8.3□□□□□ -1.08
MSI2-218ENST00000583821 DAB1O75553 588 aa8.3□□□□□ -1.08
MSI2-218ENST00000583821 RFPL3O75679 317 aa8.3□□□□□ -1.08
MSI2-218ENST00000583821 ADCY5O95622 1261 aa8.3□□□□□ -1.08
MSI2-218ENST00000583821 GNA14O95837 355 aa8.3□□□□□ -1.08
MSI2-218ENST00000583821 MT-CO1P00395 513 aa8.3□□□□□ -1.08
MSI2-218ENST00000583821 CTSLP07711 333 aa8.3□□□□□ -1.08
MSI2-218ENST00000583821 CCR1P32246 355 aa8.3□□□□□ -1.08
MSI2-218ENST00000583821 PPP1R2P41236 205 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms