RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 ABCD3P28288 659 aa6.03□□□□□ -1.44
SMARCE1-219ENST00000583294 PAFAH1B1P43034 410 aa6.03□□□□□ -1.44
SMARCE1-219ENST00000583294 MPP1Q00013 466 aa6.03□□□□□ -1.44
SMARCE1-219ENST00000583294 DDX10Q13206 875 aaKnown RBP6.03□□□□□ -1.44
SMARCE1-219ENST00000583294 Q4G0T1 1027 aa6.03□□□□□ -1.44
SMARCE1-219ENST00000583294 MTX3Q5HYI7 312 aa6.03□□□□□ -1.44
SMARCE1-219ENST00000583294 FAM69AQ5T7M9 428 aa6.03□□□□□ -1.44
SMARCE1-219ENST00000583294 VWA5B1Q5TIE3 1220 aa6.03□□□□□ -1.44
SMARCE1-219ENST00000583294 TMEM268Q5VZI3 342 aa6.03□□□□□ -1.44
SMARCE1-219ENST00000583294 ZNF626Q68DY1 528 aa6.03□□□□□ -1.44
SMARCE1-219ENST00000583294 SYCE2Q6PIF2 218 aa6.03□□□□□ -1.44
SMARCE1-219ENST00000583294 MAATS1Q7Z4T9 603 aa6.03□□□□□ -1.44
SMARCE1-219ENST00000583294 CMASQ8NFW8 434 aaPredicted RBP6.03□□□□□ -1.44
SMARCE1-219ENST00000583294 HSPH1Q92598 858 aa6.03□□□□□ -1.44
SMARCE1-219ENST00000583294 FUZQ9BT04 418 aa6.03□□□□□ -1.44
SMARCE1-219ENST00000583294 TUBB6Q9BUF5 446 aa6.03□□□□□ -1.44
SMARCE1-219ENST00000583294 EPHX3Q9H6B9 360 aa6.03□□□□□ -1.44
SMARCE1-219ENST00000583294 PREBQ9HCU5 417 aa6.03□□□□□ -1.44
SMARCE1-219ENST00000583294 TRBV5-3A0A0A0MS03 114 aa6.02□□□□□ -1.45
SMARCE1-219ENST00000583294 KIR2DS5A0A0G2JLQ3 304 aa6.02□□□□□ -1.45
SMARCE1-219ENST00000583294 A0A1W2PPC1 479 aa6.02□□□□□ -1.45
SMARCE1-219ENST00000583294 E5RJQ4 531 aa6.02□□□□□ -1.45
SMARCE1-219ENST00000583294 KIR2DS3K7RE56 304 aa6.02□□□□□ -1.45
SMARCE1-219ENST00000583294 CEP104O60308 925 aa6.02□□□□□ -1.45
SMARCE1-219ENST00000583294 MBD4O95243 580 aa6.02□□□□□ -1.45
SMARCE1-219ENST00000583294 CD4P01730 458 aa6.02□□□□□ -1.45
SMARCE1-219ENST00000583294 GPD2P43304 727 aa6.02□□□□□ -1.45
SMARCE1-219ENST00000583294 CASP6P55212 293 aa6.02□□□□□ -1.45
SMARCE1-219ENST00000583294 EZH2Q15910 746 aaKnown RBP6.02□□□□□ -1.45
SMARCE1-219ENST00000583294 BAK1Q16611 211 aa6.02□□□□□ -1.45
SMARCE1-219ENST00000583294 ALG10Q5BKT4 473 aa6.02□□□□□ -1.45
SMARCE1-219ENST00000583294 ALG10BQ5I7T1 473 aa6.02□□□□□ -1.45
SMARCE1-219ENST00000583294 ENTPD8Q5MY95 495 aa6.02□□□□□ -1.45
SMARCE1-219ENST00000583294 ISM2Q6H9L7 571 aa6.02□□□□□ -1.45
SMARCE1-219ENST00000583294 ACAD10Q6JQN1 1059 aa6.02□□□□□ -1.45
SMARCE1-219ENST00000583294 ANKRD13BQ86YJ7 626 aa6.02□□□□□ -1.45
SMARCE1-219ENST00000583294 TSPYL6Q8N831 410 aa6.02□□□□□ -1.45
SMARCE1-219ENST00000583294 ZNF366Q8N895 744 aa6.02□□□□□ -1.45
SMARCE1-219ENST00000583294 PCYOX1LQ8NBM8 494 aa6.02□□□□□ -1.45
SMARCE1-219ENST00000583294 DNAAF1Q8NEP3 725 aa6.02□□□□□ -1.45
SMARCE1-219ENST00000583294 FAR1Q8WVX9 515 aa6.02□□□□□ -1.45
SMARCE1-219ENST00000583294 RAB40AQ8WXH6 277 aa6.02□□□□□ -1.45
SMARCE1-219ENST00000583294 CXorf56Q9H5V9 222 aa6.02□□□□□ -1.45
SMARCE1-219ENST00000583294 ACTR5Q9H9F9 607 aaPredicted RBP6.02□□□□□ -1.45
SMARCE1-219ENST00000583294 JMJD4Q9H9V9 463 aa6.02□□□□□ -1.45
SMARCE1-219ENST00000583294 SMC4Q9NTJ3 1288 aa6.02□□□□□ -1.45
SMARCE1-219ENST00000583294 IRAK4Q9NWZ3 460 aa6.02□□□□□ -1.45
SMARCE1-219ENST00000583294 PLEKHB1Q9UF11 243 aaPredicted RBP6.02□□□□□ -1.45
SMARCE1-219ENST00000583294 CDH22Q9UJ99 828 aa6.02□□□□□ -1.45
SMARCE1-219ENST00000583294 TMEM98Q9Y2Y6 226 aa6.02□□□□□ -1.45
SMARCE1-219ENST00000583294 TNFRSF18Q9Y5U5 241 aa6.02□□□□□ -1.45
SMARCE1-219ENST00000583294 TSPAN4O14817 238 aa6.01□□□□□ -1.45
SMARCE1-219ENST00000583294 SPTLC2O15270 562 aa6.01□□□□□ -1.45
SMARCE1-219ENST00000583294 PRPF4O43172 522 aaKnown RBP eCLIP6.01□□□□□ -1.45
SMARCE1-219ENST00000583294 TLR2O60603 784 aa6.01□□□□□ -1.45
SMARCE1-219ENST00000583294 IL1AP01583 271 aa6.01□□□□□ -1.45
SMARCE1-219ENST00000583294 URODP06132 367 aa6.01□□□□□ -1.45
SMARCE1-219ENST00000583294 CHRM4P08173 479 aa6.01□□□□□ -1.45
SMARCE1-219ENST00000583294 ABCG1P45844 678 aa6.01□□□□□ -1.45
SMARCE1-219ENST00000583294 GAD2Q05329 585 aa6.01□□□□□ -1.45
SMARCE1-219ENST00000583294 CAMK1Q14012 370 aa6.01□□□□□ -1.45
SMARCE1-219ENST00000583294 SMTNL2Q2TAL5 461 aa6.01□□□□□ -1.45
SMARCE1-219ENST00000583294 ZNF766Q5HY98 468 aa6.01□□□□□ -1.45
SMARCE1-219ENST00000583294 TTC39AQ5SRH9 613 aa6.01□□□□□ -1.45
SMARCE1-219ENST00000583294 AAGABQ6PD74 315 aa6.01□□□□□ -1.45
SMARCE1-219ENST00000583294 IGFN1Q86VF2 1251 aa6.01□□□□□ -1.45
SMARCE1-219ENST00000583294 KIF1BPQ96EK5 621 aa6.01□□□□□ -1.45
SMARCE1-219ENST00000583294 LBHD1Q9BQE6 289 aaPredicted RBP6.01□□□□□ -1.45
SMARCE1-219ENST00000583294 MAF1Q9H063 256 aa6.01□□□□□ -1.45
SMARCE1-219ENST00000583294 SPAG4Q9NPE6 437 aa6.01□□□□□ -1.45
SMARCE1-219ENST00000583294 THSD1Q9NS62 852 aa6.01□□□□□ -1.45
SMARCE1-219ENST00000583294 AGO2Q9UKV8 859 aaKnown RBP6.01□□□□□ -1.45
SMARCE1-219ENST00000583294 PNMA2Q9UL42 364 aa6.01□□□□□ -1.45
SMARCE1-219ENST00000583294 CAMK2AQ9UQM7 478 aa6.01□□□□□ -1.45
SMARCE1-219ENST00000583294 OSGIN2Q9Y236 505 aa6.01□□□□□ -1.45
SMARCE1-219ENST00000583294 CNPY2Q9Y2B0 182 aa6.01□□□□□ -1.45
SMARCE1-219ENST00000583294 ADAP00813 363 aa6□□□□□ -1.45
SMARCE1-219ENST00000583294 LCKP06239 509 aa6□□□□□ -1.45
SMARCE1-219ENST00000583294 SLC16A2P36021 539 aa6□□□□□ -1.45
SMARCE1-219ENST00000583294 CCT4P50991 539 aaKnown RBP6□□□□□ -1.45
SMARCE1-219ENST00000583294 CCDC142Q17RM4 750 aa6□□□□□ -1.45
SMARCE1-219ENST00000583294 ZNF667Q5HYK9 610 aa6□□□□□ -1.45
SMARCE1-219ENST00000583294 C6orf10Q5SRN2 563 aa6□□□□□ -1.45
SMARCE1-219ENST00000583294 WDR5BQ86VZ2 330 aa6□□□□□ -1.45
SMARCE1-219ENST00000583294 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6□□□□□ -1.45
SMARCE1-219ENST00000583294 SRRM1Q8IYB3 904 aaKnown RBP6□□□□□ -1.45
SMARCE1-219ENST00000583294 TNIP2Q8NFZ5 429 aa6□□□□□ -1.45
SMARCE1-219ENST00000583294 VOPP1Q96AW1 172 aa6□□□□□ -1.45
SMARCE1-219ENST00000583294 CLMNQ96JQ2 1002 aa6□□□□□ -1.45
SMARCE1-219ENST00000583294 TEFMQ96QE5 360 aaKnown RBP6□□□□□ -1.45
SMARCE1-219ENST00000583294 FRG2BQ96QU4 278 aa6□□□□□ -1.45
SMARCE1-219ENST00000583294 UBA5Q9GZZ9 404 aa6□□□□□ -1.45
SMARCE1-219ENST00000583294 UNC45AQ9H3U1 944 aa6□□□□□ -1.45
SMARCE1-219ENST00000583294 VEZTQ9HBM0 779 aa6□□□□□ -1.45
SMARCE1-219ENST00000583294 SEMA4BQ9NPR2 832 aaPredicted RBP6□□□□□ -1.45
SMARCE1-219ENST00000583294 BEX4Q9NWD9 120 aaPredicted RBP6□□□□□ -1.45
SMARCE1-219ENST00000583294 TRNAU1APQ9NX07 287 aaKnown RBP6□□□□□ -1.45
SMARCE1-219ENST00000583294 IL1RAPL1Q9NZN1 696 aa6□□□□□ -1.45
SMARCE1-219ENST00000583294 MSRB1Q9NZV6 116 aa6□□□□□ -1.45
SMARCE1-219ENST00000583294 PEMTQ9UBM1 199 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms