RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-222	ENST00000581708	ADPRH	P54922	357 aa		12.88	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	EFHC2	Q5JST6	749 aa		12.88	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	DCUN1D2	Q6PH85	259 aa		12.88	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	NCEH1	Q6PIU2	408 aa		12.88	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	TFAP2D	Q7Z6R9	452 aa		12.88	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	NLRP14	Q86W24	1093 aa		12.88	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	PCDH20	Q8N6Y1	951 aa	Known RBP	12.88	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	FNIP1	Q8TF40	1166 aa		12.88	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	SNX19	Q92543	992 aa		12.88	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	ISG20	Q96AZ6	181 aa	Known RBP	12.88	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	NAP1L5	Q96NT1	182 aa	Predicted RBP	12.88	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	ACE2	Q9BYF1	805 aa	Predicted RBP	12.88	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	TTYH3	Q9C0H2	523 aa		12.88	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	CBX8	Q9HC52	389 aa		12.88	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	PREB	Q9HCU5	417 aa		12.88	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	TM9SF3	Q9HD45	589 aa		12.88	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	TMPRSS4	Q9NRS4	437 aa		12.88	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	SERGEF	Q9UGK8	458 aa		12.88	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	HPCAL4	Q9UM19	191 aa		12.88	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	DMTF1	Q9Y222	760 aa		12.88	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	SNX10	Q9Y5X0	201 aa		12.88	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708		A0A0D9SEW6	157 aa		12.87	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	VILL	O15195	856 aa		12.87	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	PLRG1	O43660	514 aa	Known RBP	12.87	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	SNAP91	O60641	907 aa		12.87	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	ZMPSTE24	O75844	475 aa		12.87	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	LRIG2	O94898	1065 aa		12.87	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	MYBL1	P10243	752 aa		12.87	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	CD59	P13987	128 aa		12.87	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	VAV1	P15498	845 aa		12.87	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	RRM1	P23921	792 aa		12.87	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	CHRNA3	P32297	505 aa		12.87	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	SERPINH1	P50454	418 aa	Known RBP	12.87	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	YBEY	P58557	167 aa	Predicted RBP	12.87	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	KLHL30	Q0D2K2	578 aa		12.87	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	MAMLD1	Q13495	774 aa		12.87	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	SUZ12	Q15022	739 aa	Known RBP	12.87	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	SLC45A4	Q5BKX6	768 aa		12.87	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	PLEKHA7	Q6IQ23	1121 aa		12.87	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	DBX2	Q6ZNG2	339 aa		12.87	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708		Q6ZVU0	165 aa		12.87	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	ZSCAN30	Q86W11	494 aa		12.87	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	PSTK	Q8IV42	348 aa	Known RBP	12.87	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	OR2A12	Q8NGT7	310 aa		12.87	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	OR14C36	Q8NHC7	312 aa		12.87	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	PIP4K2C	Q8TBX8	421 aa		12.87	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	CASKIN2	Q8WXE0	1202 aa		12.87	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	PPP1R16A	Q96I34	528 aa		12.87	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	LRIG1	Q96JA1	1093 aa		12.87	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	EPAS1	Q99814	870 aa		12.87	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	ORAI3	Q9BRQ5	295 aa		12.87	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	SPON2	Q9BUD6	331 aa		12.87	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	HAUS4	Q9H6D7	363 aa		12.87	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	ATP13A1	Q9HD20	1204 aa		12.87	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	ANGPTL2	Q9UKU9	493 aa		12.87	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	EPG5	Q9HCE0	2579 aa		12.87	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	CHD5	Q8TDI0	1954 aa		12.87	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	ADAMTS9	Q9P2N4	1935 aa		12.86	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	WASH4P	A8MWX3	477 aa		12.86	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	CBX4	O00257	560 aa		12.86	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	FGF10	O15520	208 aa	Predicted RBP	12.86	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	CCP110	O43303	1012 aa		12.86	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	RNGTT	O60942	597 aa	Known RBP	12.86	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	RTN2	O75298	545 aa		12.86	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	TRIM16	O95361	564 aa		12.86	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	MT-CO1	P00395	513 aa		12.86	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	PBX1	P40424	430 aa		12.86	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	CSNK1E	P49674	416 aa	Known RBP	12.86	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	ZNF135	P52742	658 aa	Predicted RBP	12.86	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	UBASH3A	P57075	661 aa		12.86	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	RPL7A	P62424	266 aa	Known RBP	12.86	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	FANCC	Q00597	558 aa		12.86	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	ZNF252P-AS1	Q0IIN9	211 aa		12.86	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	OVGP1	Q12889	678 aa		12.86	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	ACAP1	Q15027	740 aa		12.86	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	HLA-B	Q31612	363 aa		12.86	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	RWDD4	Q6NW29	188 aa	Known RBP	12.86	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	C22orf39	Q6P5X5	142 aa		12.86	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	12.86	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	PHLDB2	Q86SQ0	1253 aa		12.86	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	PRPF39	Q86UA1	669 aa	Known RBP	12.86	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	VPS36	Q86VN1	386 aa		12.86	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	IQCH	Q86VS3	1027 aa		12.86	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	TRIM69	Q86WT6	500 aa		12.86	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	DRC7	Q8IY82	874 aa		12.86	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	CCDC185	Q8N715	623 aa		12.86	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	OR7D4	Q8NG98	312 aa		12.86	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	MCEE	Q96PE7	176 aa		12.86	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	HDAC8	Q9BY41	377 aa		12.86	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	GAREM1	Q9H706	876 aa		12.86	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	CATSPERB	Q9H7T0	1116 aa		12.86	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	MRPL47	Q9HD33	250 aa	Known RBP	12.86	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	FSCN3	Q9NQT6	498 aa		12.86	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	NEU3	Q9UQ49	428 aa		12.86	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	ANKRD6	Q9Y2G4	727 aa		12.86	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	SCIN	Q9Y6U3	715 aa		12.86	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	KNL1	Q8NG31	2342 aa		12.86	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	TBC1D3D	A0A087WVF3	549 aa		12.85	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	TBC1D3I	A0A087WXS9	549 aa		12.85	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	TBC1D3E	A0A087X179	549 aa		12.85	□□□□□ -0.35

Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms