RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 TAS2R38P59533 333 aa12.53□□□□□ -0.4
CDK5RAP3-216ENST00000579853 ZNF177Q13360 481 aaPredicted RBP12.53□□□□□ -0.4
CDK5RAP3-216ENST00000579853 ZNF284Q2VY69 593 aa12.53□□□□□ -0.4
CDK5RAP3-216ENST00000579853 FOXD4L6Q3SYB3 417 aaPredicted RBP12.53□□□□□ -0.4
CDK5RAP3-216ENST00000579853 CBWD6Q4V339 395 aa12.53□□□□□ -0.4
CDK5RAP3-216ENST00000579853 ZC3H12AQ5D1E8 599 aaKnown RBP12.53□□□□□ -0.4
CDK5RAP3-216ENST00000579853 DCAF17Q5H9S7 520 aaPredicted RBP12.53□□□□□ -0.4
CDK5RAP3-216ENST00000579853 CBWD3Q5JTY5 395 aa12.53□□□□□ -0.4
CDK5RAP3-216ENST00000579853 CBWD5Q5RIA9 395 aa12.53□□□□□ -0.4
CDK5RAP3-216ENST00000579853 PIP5KL1Q5T9C9 394 aa12.53□□□□□ -0.4
CDK5RAP3-216ENST00000579853 FOXD4L3Q6VB84 417 aaPredicted RBP12.53□□□□□ -0.4
CDK5RAP3-216ENST00000579853 Q6ZVU0 165 aa12.53□□□□□ -0.4
CDK5RAP3-216ENST00000579853 CLEC14AQ86T13 490 aa12.53□□□□□ -0.4
CDK5RAP3-216ENST00000579853 TAC4Q86UU9 113 aa12.53□□□□□ -0.4
CDK5RAP3-216ENST00000579853 TMIEQ8NEW7 156 aa12.53□□□□□ -0.4
CDK5RAP3-216ENST00000579853 TFAP2BQ92481 460 aa12.53□□□□□ -0.4
CDK5RAP3-216ENST00000579853 GLMNQ92990 594 aa12.53□□□□□ -0.4
CDK5RAP3-216ENST00000579853 ATXN7L3BQ96GX2 97 aa12.53□□□□□ -0.4
CDK5RAP3-216ENST00000579853 MYOCQ99972 504 aa12.53□□□□□ -0.4
CDK5RAP3-216ENST00000579853 POPDC2Q9HBU9 364 aa12.53□□□□□ -0.4
CDK5RAP3-216ENST00000579853 SALL4Q9UJQ4 1053 aa12.53□□□□□ -0.4
CDK5RAP3-216ENST00000579853 NAALADL1Q9UQQ1 740 aa12.53□□□□□ -0.4
CDK5RAP3-216ENST00000579853 U3KQA8 63 aa12.53□□□□□ -0.4
CDK5RAP3-216ENST00000579853 A0A1B0GVL5 298 aa12.52□□□□□ -0.41
CDK5RAP3-216ENST00000579853 CPED1A4D0V7 1026 aa12.52□□□□□ -0.41
CDK5RAP3-216ENST00000579853 EME2A4GXA9 379 aaPredicted RBP12.52□□□□□ -0.41
CDK5RAP3-216ENST00000579853 PYCARD-AS1I3L0S3 204 aa12.52□□□□□ -0.41
CDK5RAP3-216ENST00000579853 KPNA3O00505 521 aaPredicted RBP12.52□□□□□ -0.41
CDK5RAP3-216ENST00000579853 PCDH8O95206 1070 aa12.52□□□□□ -0.41
CDK5RAP3-216ENST00000579853 TRUB2O95900 331 aaKnown RBP12.52□□□□□ -0.41
CDK5RAP3-216ENST00000579853 F13A1P00488 732 aa12.52□□□□□ -0.41
CDK5RAP3-216ENST00000579853 CSF2P04141 144 aa12.52□□□□□ -0.41
CDK5RAP3-216ENST00000579853 PRNPP04156 253 aa12.52□□□□□ -0.41
CDK5RAP3-216ENST00000579853 NTRK1P04629 796 aa12.52□□□□□ -0.41
CDK5RAP3-216ENST00000579853 ITGB2P05107 769 aa12.52□□□□□ -0.41
CDK5RAP3-216ENST00000579853 ITGA2BP08514 1039 aa12.52□□□□□ -0.41
CDK5RAP3-216ENST00000579853 NME1P15531 152 aaKnown RBP12.52□□□□□ -0.41
CDK5RAP3-216ENST00000579853 RPL34P49207 117 aaKnown RBP12.52□□□□□ -0.41
CDK5RAP3-216ENST00000579853 RPIAP49247 311 aa12.52□□□□□ -0.41
CDK5RAP3-216ENST00000579853 KRT83P78385 493 aa12.52□□□□□ -0.41
CDK5RAP3-216ENST00000579853 NFATC3Q12968 1075 aa12.52□□□□□ -0.41
CDK5RAP3-216ENST00000579853 ZSCAN23Q3MJ62 389 aa12.52□□□□□ -0.41
CDK5RAP3-216ENST00000579853 ATG14Q6ZNE5 492 aa12.52□□□□□ -0.41
CDK5RAP3-216ENST00000579853 Q6ZSR6 202 aa12.52□□□□□ -0.41
CDK5RAP3-216ENST00000579853 PTAR1Q7Z6K3 402 aaPredicted RBP12.52□□□□□ -0.41
CDK5RAP3-216ENST00000579853 ZSCAN30Q86W11 494 aa12.52□□□□□ -0.41
CDK5RAP3-216ENST00000579853 PARGQ86W56 976 aa12.52□□□□□ -0.41
CDK5RAP3-216ENST00000579853 SLC22A18ASQ8N1D0 253 aa12.52□□□□□ -0.41
CDK5RAP3-216ENST00000579853 SH2D3CQ8N5H7 860 aa12.52□□□□□ -0.41
CDK5RAP3-216ENST00000579853 ZNF548Q8NEK5 533 aaPredicted RBP12.52□□□□□ -0.41
CDK5RAP3-216ENST00000579853 NAT6Q93015 286 aa12.52□□□□□ -0.41
CDK5RAP3-216ENST00000579853 CCDC34Q96HJ3 373 aa12.52□□□□□ -0.41
CDK5RAP3-216ENST00000579853 PPP1R16AQ96I34 528 aa12.52□□□□□ -0.41
CDK5RAP3-216ENST00000579853 MED15Q96RN5 788 aa12.52□□□□□ -0.41
CDK5RAP3-216ENST00000579853 FEM1AQ9BSK4 669 aa12.52□□□□□ -0.41
CDK5RAP3-216ENST00000579853 ST7Q9NRC1 585 aa12.52□□□□□ -0.41
CDK5RAP3-216ENST00000579853 XPO7Q9UIA9 1087 aaKnown RBP12.52□□□□□ -0.41
CDK5RAP3-216ENST00000579853 VPS28Q9UK41 221 aa12.52□□□□□ -0.41
CDK5RAP3-216ENST00000579853 ATXN7L1Q9ULK2 861 aaPredicted RBP12.52□□□□□ -0.41
CDK5RAP3-216ENST00000579853 PCDHB4Q9Y5E5 795 aa12.52□□□□□ -0.41
CDK5RAP3-216ENST00000579853 ENTPD2Q9Y5L3 495 aa12.52□□□□□ -0.41
CDK5RAP3-216ENST00000579853 RELNP78509 3460 aa12.52□□□□□ -0.41
CDK5RAP3-216ENST00000579853 CCDC187A0A096LP49 1063 aa12.51□□□□□ -0.41
CDK5RAP3-216ENST00000579853 SPTY2D1-AS1A0A0U1RR47 76 aa12.51□□□□□ -0.41
CDK5RAP3-216ENST00000579853 TPP1O14773 563 aa12.51□□□□□ -0.41
CDK5RAP3-216ENST00000579853 AQP9O43315 295 aa12.51□□□□□ -0.41
CDK5RAP3-216ENST00000579853 BNIP3LO60238 219 aa12.51□□□□□ -0.41
CDK5RAP3-216ENST00000579853 CLDN11O75508 207 aa12.51□□□□□ -0.41
CDK5RAP3-216ENST00000579853 NEBLO76041 1014 aa12.51□□□□□ -0.41
CDK5RAP3-216ENST00000579853 GJB6O95452 261 aa12.51□□□□□ -0.41
CDK5RAP3-216ENST00000579853 CCR1P32246 355 aa12.51□□□□□ -0.41
CDK5RAP3-216ENST00000579853 CHRNA3P32297 505 aa12.51□□□□□ -0.41
CDK5RAP3-216ENST00000579853 SYKP43405 635 aa12.51□□□□□ -0.41
CDK5RAP3-216ENST00000579853 RABIFP47224 123 aa12.51□□□□□ -0.41
CDK5RAP3-216ENST00000579853 YWHAZP63104 245 aaKnown RBP12.51□□□□□ -0.41
CDK5RAP3-216ENST00000579853 RPS21P63220 83 aaKnown RBP12.51□□□□□ -0.41
CDK5RAP3-216ENST00000579853 SRSF1Q07955 248 aaKnown RBP eCLIP12.51□□□□□ -0.415e-7■■□□□ 13.6
CDK5RAP3-216ENST00000579853 CETN1Q12798 172 aa12.51□□□□□ -0.41
CDK5RAP3-216ENST00000579853 DPYDQ12882 1025 aa12.51□□□□□ -0.41
CDK5RAP3-216ENST00000579853 LRMPQ12912 555 aa12.51□□□□□ -0.41
CDK5RAP3-216ENST00000579853 CLN3Q13286 438 aa12.51□□□□□ -0.41
CDK5RAP3-216ENST00000579853 EIF3IQ13347 325 aaKnown RBP12.51□□□□□ -0.41
CDK5RAP3-216ENST00000579853 MEA1Q16626 185 aa12.51□□□□□ -0.41
CDK5RAP3-216ENST00000579853 CDKN3Q16667 212 aa12.51□□□□□ -0.41
CDK5RAP3-216ENST00000579853 TMEM259Q4ZIN3 620 aa12.51□□□□□ -0.41
CDK5RAP3-216ENST00000579853 SYPL2Q5VXT5 272 aa12.51□□□□□ -0.41
CDK5RAP3-216ENST00000579853 CXorf57Q6NSI4 855 aaKnown RBP12.51□□□□□ -0.41
CDK5RAP3-216ENST00000579853 KYAT3Q6YP21 454 aaKnown RBP12.51□□□□□ -0.41
CDK5RAP3-216ENST00000579853 GCNT7Q6ZNI0 430 aa12.51□□□□□ -0.41
CDK5RAP3-216ENST00000579853 ERN2Q76MJ5 926 aaKnown RBP12.51□□□□□ -0.41
CDK5RAP3-216ENST00000579853 EFL1Q7Z2Z2 1120 aaKnown RBP12.51□□□□□ -0.41
CDK5RAP3-216ENST00000579853 STK32AQ8WU08 396 aa12.51□□□□□ -0.41
CDK5RAP3-216ENST00000579853 BTN2A2Q8WVV5 523 aa12.51□□□□□ -0.41
CDK5RAP3-216ENST00000579853 KLK6Q92876 244 aa12.51□□□□□ -0.41
CDK5RAP3-216ENST00000579853 FEM1CQ96JP0 617 aa12.51□□□□□ -0.41
CDK5RAP3-216ENST00000579853 RPRD1AQ96P16 312 aaPredicted RBP12.51□□□□□ -0.41
CDK5RAP3-216ENST00000579853 NT5C1BQ96P26 610 aa12.51□□□□□ -0.41
CDK5RAP3-216ENST00000579853 IL12RB2Q99665 862 aa12.51□□□□□ -0.41
CDK5RAP3-216ENST00000579853 TSG101Q99816 390 aa12.51□□□□□ -0.41
CDK5RAP3-216ENST00000579853 PRMT1Q99873 361 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms