RNA–Protein interactions for RNA: ENST00000579449.1

TSEN54-206, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-206ENST00000579449 EYSQ5T1H1 3165 aa14.16□□□□□ -0.14
TSEN54-206ENST00000579449 TICRRQ7Z2Z1 1910 aa14.15□□□□□ -0.14
TSEN54-206ENST00000579449 CBX4O00257 560 aa14.15□□□□□ -0.14
TSEN54-206ENST00000579449 CACNG3O60359 315 aa14.15□□□□□ -0.14
TSEN54-206ENST00000579449 SNAP91O60641 907 aa14.15□□□□□ -0.14
TSEN54-206ENST00000579449 IVDP26440 423 aa14.15□□□□□ -0.14
TSEN54-206ENST00000579449 HLA-FP30511 346 aa14.15□□□□□ -0.14
TSEN54-206ENST00000579449 ADCY8P40145 1251 aa14.15□□□□□ -0.14
TSEN54-206ENST00000579449 PLK1P53350 603 aa14.15□□□□□ -0.14
TSEN54-206ENST00000579449 DRG2P55039 364 aaKnown RBP14.15□□□□□ -0.14
TSEN54-206ENST00000579449 NR1H3Q13133 447 aa14.15□□□□□ -0.14
TSEN54-206ENST00000579449 SLC12A1Q13621 1099 aa14.15□□□□□ -0.14
TSEN54-206ENST00000579449 PLEKHG6Q3KR16 790 aa14.15□□□□□ -0.14
TSEN54-206ENST00000579449 TEX44Q53QW1 395 aa14.15□□□□□ -0.14
TSEN54-206ENST00000579449 PTCRAQ6ISU1 281 aaPredicted RBP14.15□□□□□ -0.14
TSEN54-206ENST00000579449 ARHGEF18Q6ZSZ5 1173 aa14.15□□□□□ -0.14
TSEN54-206ENST00000579449 PID1Q7Z2X4 250 aa14.15□□□□□ -0.14
TSEN54-206ENST00000579449 C12orf40Q86WS4 652 aa14.15□□□□□ -0.14
TSEN54-206ENST00000579449 IFT20Q8IY31 132 aa14.15□□□□□ -0.14
TSEN54-206ENST00000579449 PLCD3Q8N3E9 789 aa14.15□□□□□ -0.14
TSEN54-206ENST00000579449 DCAF4L2Q8NA75 395 aa14.15□□□□□ -0.14
TSEN54-206ENST00000579449 TTC8Q8TAM2 541 aa14.15□□□□□ -0.14
TSEN54-206ENST00000579449 NSMCE1Q8WV22 266 aa14.15□□□□□ -0.14
TSEN54-206ENST00000579449 SEC14L1Q92503 715 aa14.15□□□□□ -0.14
TSEN54-206ENST00000579449 RUBCNQ92622 972 aa14.15□□□□□ -0.14
TSEN54-206ENST00000579449 VAT1Q99536 393 aa14.15□□□□□ -0.14
TSEN54-206ENST00000579449 IL12RB2Q99665 862 aa14.15□□□□□ -0.14
TSEN54-206ENST00000579449 PARD6BQ9BYG5 372 aa14.15□□□□□ -0.14
TSEN54-206ENST00000579449 KLHL8Q9P2G9 620 aaPredicted RBP14.15□□□□□ -0.14
TSEN54-206ENST00000579449 LIMD1Q9UGP4 676 aa14.15□□□□□ -0.14
TSEN54-206ENST00000579449 GGA2Q9UJY4 613 aa14.15□□□□□ -0.14
TSEN54-206ENST00000579449 INTS6Q9UL03 887 aaKnown RBP14.15□□□□□ -0.14
TSEN54-206ENST00000579449 ACTL7AQ9Y615 435 aa14.15□□□□□ -0.14
TSEN54-206ENST00000579449 KIAA1549LQ6ZVL6 1849 aa14.14□□□□□ -0.15
TSEN54-206ENST00000579449 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.14□□□□□ -0.15
TSEN54-206ENST00000579449 DNALI1O14645 258 aaPredicted RBP14.14□□□□□ -0.15
TSEN54-206ENST00000579449 TRIM24O15164 1050 aa14.14□□□□□ -0.15
TSEN54-206ENST00000579449 ZBTB24O43167 697 aaPredicted RBP14.14□□□□□ -0.15
TSEN54-206ENST00000579449 OPHN1O60890 802 aa14.14□□□□□ -0.15
TSEN54-206ENST00000579449 ZMPSTE24O75844 475 aa14.14□□□□□ -0.15
TSEN54-206ENST00000579449 CISD3P0C7P0 127 aa14.14□□□□□ -0.15
TSEN54-206ENST00000579449 PABPC1P11940 636 aaKnown RBP14.14□□□□□ -0.15
TSEN54-206ENST00000579449 TERF1P54274 439 aa14.14□□□□□ -0.15
TSEN54-206ENST00000579449 HNRNPDQ14103 355 aaKnown RBP14.14□□□□□ -0.15
TSEN54-206ENST00000579449 AAK1Q2M2I8 961 aa14.14□□□□□ -0.15
TSEN54-206ENST00000579449 PITRM1Q5JRX3 1037 aa14.14□□□□□ -0.15
TSEN54-206ENST00000579449 TMCO4Q5TGY1 634 aa14.14□□□□□ -0.15
TSEN54-206ENST00000579449 C4orf22Q6V702 233 aa14.14□□□□□ -0.15
TSEN54-206ENST00000579449 KIAA0907Q7Z7F0 614 aaPredicted RBP14.14□□□□□ -0.15
TSEN54-206ENST00000579449 ETFBKMTQ8IXQ9 262 aa14.14□□□□□ -0.15
TSEN54-206ENST00000579449 TAB3Q8N5C8 712 aaPredicted RBP14.14□□□□□ -0.15
TSEN54-206ENST00000579449 TEX26Q8N6G2 289 aa14.14□□□□□ -0.15
TSEN54-206ENST00000579449 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.14□□□□□ -0.15
TSEN54-206ENST00000579449 MAFAQ8NHW3 353 aaPredicted RBP14.14□□□□□ -0.15
TSEN54-206ENST00000579449 LRRC45Q96CN5 670 aa14.14□□□□□ -0.15
TSEN54-206ENST00000579449 SNF8Q96H20 258 aa14.14□□□□□ -0.15
TSEN54-206ENST00000579449 ZNF599Q96NL3 588 aa14.14□□□□□ -0.15
TSEN54-206ENST00000579449 AGAP3Q96P47 875 aa14.14□□□□□ -0.15
TSEN54-206ENST00000579449 BRD9Q9H8M2 597 aa14.14□□□□□ -0.15
TSEN54-206ENST00000579449 PRDM6Q9NQX0 595 aa14.14□□□□□ -0.15
TSEN54-206ENST00000579449 FAM114A2Q9NRY5 505 aa14.14□□□□□ -0.15
TSEN54-206ENST00000579449 DNAJC17Q9NVM6 304 aaKnown RBP14.14□□□□□ -0.15
TSEN54-206ENST00000579449 RBM22Q9NW64 420 aaKnown RBP eCLIP14.14□□□□□ -0.15
TSEN54-206ENST00000579449 GTSE1Q9NYZ3 720 aa14.14□□□□□ -0.15
TSEN54-206ENST00000579449 UBA2Q9UBT2 640 aaPredicted RBP14.14□□□□□ -0.15
TSEN54-206ENST00000579449 VPS51Q9UID3 782 aa14.14□□□□□ -0.15
TSEN54-206ENST00000579449 TRHDEQ9UKU6 1024 aa14.14□□□□□ -0.15
TSEN54-206ENST00000579449 ARNTLO00327 626 aa14.13□□□□□ -0.15
TSEN54-206ENST00000579449 TULP3O75386 442 aa14.13□□□□□ -0.15
TSEN54-206ENST00000579449 NEBLO76041 1014 aa14.13□□□□□ -0.15
TSEN54-206ENST00000579449 METTL18O95568 372 aa14.13□□□□□ -0.15
TSEN54-206ENST00000579449 HLA-DQB2P05538 268 aa14.13□□□□□ -0.15
TSEN54-206ENST00000579449 CD68P34810 354 aaPredicted RBP14.13□□□□□ -0.15
TSEN54-206ENST00000579449 SLC6A11P48066 632 aa14.13□□□□□ -0.15
TSEN54-206ENST00000579449 CARSP49589 748 aaKnown RBP14.13□□□□□ -0.15
TSEN54-206ENST00000579449 DGKGP49619 791 aa14.13□□□□□ -0.15
TSEN54-206ENST00000579449 RENBPP51606 427 aa14.13□□□□□ -0.15
TSEN54-206ENST00000579449 VSNL1P62760 191 aa14.13□□□□□ -0.15
TSEN54-206ENST00000579449 ARF5P84085 180 aa14.13□□□□□ -0.15
TSEN54-206ENST00000579449 TFF2Q03403 129 aa14.13□□□□□ -0.15
TSEN54-206ENST00000579449 SLC10A7Q0GE19 358 aa14.13□□□□□ -0.15
TSEN54-206ENST00000579449 LBRQ14739 615 aaKnown RBP14.13□□□□□ -0.15
TSEN54-206ENST00000579449 ITPRIPL2Q3MIP1 535 aa14.13□□□□□ -0.15
TSEN54-206ENST00000579449 PUS10Q3MIT2 529 aaKnown RBP14.13□□□□□ -0.15
TSEN54-206ENST00000579449 FUT11Q495W5 492 aa14.13□□□□□ -0.15
TSEN54-206ENST00000579449 FAXCQ5TGI0 409 aa14.13□□□□□ -0.15
TSEN54-206ENST00000579449 MARC1Q5VT66 337 aa14.13□□□□□ -0.15
TSEN54-206ENST00000579449 IZUMO3Q5VZ72 239 aa14.13□□□□□ -0.15
TSEN54-206ENST00000579449 WDR93Q6P2C0 686 aa14.13□□□□□ -0.15
TSEN54-206ENST00000579449 LINGO4Q6UY18 593 aa14.13□□□□□ -0.15
TSEN54-206ENST00000579449 CNTD1Q8N815 330 aa14.13□□□□□ -0.15
TSEN54-206ENST00000579449 IFT81Q8WYA0 676 aa14.13□□□□□ -0.15
TSEN54-206ENST00000579449 NXPE3Q969Y0 559 aa14.13□□□□□ -0.15
TSEN54-206ENST00000579449 ZNF419Q96HQ0 510 aaPredicted RBP14.13□□□□□ -0.15
TSEN54-206ENST00000579449 TEKT5Q96M29 485 aa14.13□□□□□ -0.15
TSEN54-206ENST00000579449 C2orf49Q9BVC5 232 aaPredicted RBP14.13□□□□□ -0.15
TSEN54-206ENST00000579449 ETNK1Q9HBU6 452 aa14.13□□□□□ -0.15
TSEN54-206ENST00000579449 NT5MQ9NPB1 228 aa14.13□□□□□ -0.15
TSEN54-206ENST00000579449 RAB6BQ9NRW1 208 aa14.13□□□□□ -0.15
TSEN54-206ENST00000579449 GRHL1Q9NZI5 618 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms