RNA–Protein interactions for RNA: ENST00000579175.5

CDK5RAP3-212, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-212ENST00000579175 MYF5P13349 255 aa12.94□□□□□ -0.34
CDK5RAP3-212ENST00000579175 DUSP3P51452 185 aaPredicted RBP12.94□□□□□ -0.34
CDK5RAP3-212ENST00000579175 UCNP55089 124 aa12.94□□□□□ -0.34
CDK5RAP3-212ENST00000579175 PITX1P78337 314 aaPredicted RBP12.94□□□□□ -0.34
CDK5RAP3-212ENST00000579175 KRT83P78385 493 aa12.94□□□□□ -0.34
CDK5RAP3-212ENST00000579175 RHDQ02161 417 aa12.94□□□□□ -0.34
CDK5RAP3-212ENST00000579175 CENPCQ03188 943 aa12.94□□□□□ -0.34
CDK5RAP3-212ENST00000579175 NME3Q13232 169 aa12.94□□□□□ -0.34
CDK5RAP3-212ENST00000579175 ZNF542PQ5EBM4 170 aa12.94□□□□□ -0.34
CDK5RAP3-212ENST00000579175 KLHL10Q6JEL2 608 aa12.94□□□□□ -0.34
CDK5RAP3-212ENST00000579175 FBXL22Q6P050 247 aa12.94□□□□□ -0.34
CDK5RAP3-212ENST00000579175 C11orf57Q6ZUT1 292 aaPredicted RBP12.94□□□□□ -0.34
CDK5RAP3-212ENST00000579175 BEND5Q7L4P6 421 aa12.94□□□□□ -0.34
CDK5RAP3-212ENST00000579175 ATP11CQ8NB49 1132 aa12.94□□□□□ -0.34
CDK5RAP3-212ENST00000579175 EHBP1Q8NDI1 1231 aa12.94□□□□□ -0.34
CDK5RAP3-212ENST00000579175 SPATA20Q8TB22 786 aa12.94□□□□□ -0.34
CDK5RAP3-212ENST00000579175 KCNE4Q8WWG9 221 aa12.94□□□□□ -0.34
CDK5RAP3-212ENST00000579175 CCDC114Q96M63 670 aa12.94□□□□□ -0.34
CDK5RAP3-212ENST00000579175 CEP63Q96MT8 703 aa12.94□□□□□ -0.34
CDK5RAP3-212ENST00000579175 PRMT1Q99873 361 aaKnown RBP12.94□□□□□ -0.34
CDK5RAP3-212ENST00000579175 FEM1AQ9BSK4 669 aa12.94□□□□□ -0.34
CDK5RAP3-212ENST00000579175 SIK2Q9H0K1 926 aa12.94□□□□□ -0.34
CDK5RAP3-212ENST00000579175 KLHL11Q9NVR0 708 aa12.94□□□□□ -0.34
CDK5RAP3-212ENST00000579175 DNAJC28Q9NX36 388 aa12.94□□□□□ -0.34
CDK5RAP3-212ENST00000579175 VANGL2Q9ULK5 521 aa12.94□□□□□ -0.34
CDK5RAP3-212ENST00000579175 GOLGA6L19H0YKK7 550 aa12.93□□□□□ -0.34
CDK5RAP3-212ENST00000579175 GRAP2O75791 330 aa12.93□□□□□ -0.34
CDK5RAP3-212ENST00000579175 PIAS2O75928 621 aa12.93□□□□□ -0.34
CDK5RAP3-212ENST00000579175 CKMT1AP12532 417 aa12.93□□□□□ -0.34
CDK5RAP3-212ENST00000579175 CHRNA3P32297 505 aa12.93□□□□□ -0.34
CDK5RAP3-212ENST00000579175 GGCXP38435 758 aa12.93□□□□□ -0.34
CDK5RAP3-212ENST00000579175 USP8P40818 1118 aa12.93□□□□□ -0.34
CDK5RAP3-212ENST00000579175 CLDN2P57739 230 aa12.93□□□□□ -0.34
CDK5RAP3-212ENST00000579175 GCNT1Q02742 428 aa12.93□□□□□ -0.34
CDK5RAP3-212ENST00000579175 MAPK8IP2Q13387 824 aaPredicted RBP12.93□□□□□ -0.34
CDK5RAP3-212ENST00000579175 AUHQ13825 339 aaKnown RBP12.93□□□□□ -0.34
CDK5RAP3-212ENST00000579175 IQCB1Q15051 598 aa12.93□□□□□ -0.34
CDK5RAP3-212ENST00000579175 TAF5Q15542 800 aa12.93□□□□□ -0.34
CDK5RAP3-212ENST00000579175 DPCR1Q3MIW9 517 aa12.93□□□□□ -0.34
CDK5RAP3-212ENST00000579175 COBLL1Q53SF7 1204 aa12.93□□□□□ -0.34
CDK5RAP3-212ENST00000579175 CXorf57Q6NSI4 855 aaKnown RBP12.93□□□□□ -0.34
CDK5RAP3-212ENST00000579175 LUZP1Q86V48 1076 aa12.93□□□□□ -0.34
CDK5RAP3-212ENST00000579175 HORMAD1Q86X24 394 aa12.93□□□□□ -0.34
CDK5RAP3-212ENST00000579175 DEFB106AQ8N104 65 aa12.93□□□□□ -0.34
CDK5RAP3-212ENST00000579175 SH2D3CQ8N5H7 860 aa12.93□□□□□ -0.34
CDK5RAP3-212ENST00000579175 OR13H1Q8NG92 308 aa12.93□□□□□ -0.34
CDK5RAP3-212ENST00000579175 LMO3Q8TAP4 145 aa12.93□□□□□ -0.34
CDK5RAP3-212ENST00000579175 MAPK15Q8TD08 544 aa12.93□□□□□ -0.34
CDK5RAP3-212ENST00000579175 STK32AQ8WU08 396 aa12.93□□□□□ -0.34
CDK5RAP3-212ENST00000579175 ZNF606Q8WXB4 792 aa12.93□□□□□ -0.34
CDK5RAP3-212ENST00000579175 APOLD1Q96LR9 279 aa12.93□□□□□ -0.34
CDK5RAP3-212ENST00000579175 SLC4A5Q9BY07 1137 aa12.93□□□□□ -0.34
CDK5RAP3-212ENST00000579175 POLR1BQ9H9Y6 1135 aa12.93□□□□□ -0.34
CDK5RAP3-212ENST00000579175 UBE2TQ9NPD8 197 aaPredicted RBP12.93□□□□□ -0.34
CDK5RAP3-212ENST00000579175 IPO11Q9UI26 975 aaKnown RBP12.93□□□□□ -0.34
CDK5RAP3-212ENST00000579175 DACH1Q9UI36 760 aa12.93□□□□□ -0.34
CDK5RAP3-212ENST00000579175 CPED1A4D0V7 1026 aa12.92□□□□□ -0.34
CDK5RAP3-212ENST00000579175 PMM2O15305 246 aa12.92□□□□□ -0.34
CDK5RAP3-212ENST00000579175 P4HA2O15460 535 aa12.92□□□□□ -0.34
CDK5RAP3-212ENST00000579175 CLDN11O75508 207 aa12.92□□□□□ -0.34
CDK5RAP3-212ENST00000579175 HNRNPA2B1P22626 353 aaKnown RBP12.92□□□□□ -0.34
CDK5RAP3-212ENST00000579175 RBMS1P29558 406 aaKnown RBP12.92□□□□□ -0.34
CDK5RAP3-212ENST00000579175 GNA15P30679 374 aa12.92□□□□□ -0.34
CDK5RAP3-212ENST00000579175 RECQLP46063 649 aaPredicted RBP12.92□□□□□ -0.34
CDK5RAP3-212ENST00000579175 LSSP48449 732 aa12.92□□□□□ -0.34
CDK5RAP3-212ENST00000579175 RPL34P49207 117 aaKnown RBP12.92□□□□□ -0.34
CDK5RAP3-212ENST00000579175 TAS2R38P59533 333 aa12.92□□□□□ -0.34
CDK5RAP3-212ENST00000579175 CT47A1Q5JQC4 288 aaPredicted RBP12.92□□□□□ -0.34
CDK5RAP3-212ENST00000579175 EFHC1Q5JVL4 640 aa12.92□□□□□ -0.34
CDK5RAP3-212ENST00000579175 PIP5KL1Q5T9C9 394 aa12.92□□□□□ -0.34
CDK5RAP3-212ENST00000579175 OR6B2Q6IFH4 312 aa12.92□□□□□ -0.34
CDK5RAP3-212ENST00000579175 NEK5Q6P3R8 708 aa12.92□□□□□ -0.34
CDK5RAP3-212ENST00000579175 FOXR1Q6PIV2 292 aa12.92□□□□□ -0.34
CDK5RAP3-212ENST00000579175 Q6ZSR6 202 aa12.92□□□□□ -0.34
CDK5RAP3-212ENST00000579175 PTAR1Q7Z6K3 402 aaPredicted RBP12.92□□□□□ -0.34
CDK5RAP3-212ENST00000579175 TMEM110Q86TL2 294 aa12.92□□□□□ -0.34
CDK5RAP3-212ENST00000579175 TMEM145Q8NBT3 493 aa12.92□□□□□ -0.34
CDK5RAP3-212ENST00000579175 OR52K2Q8NGK3 314 aa12.92□□□□□ -0.34
CDK5RAP3-212ENST00000579175 FAM131CQ96AQ9 280 aa12.92□□□□□ -0.34
CDK5RAP3-212ENST00000579175 DHTKD1Q96HY7 919 aaPredicted RBP12.92□□□□□ -0.34
CDK5RAP3-212ENST00000579175 KREMEN1Q96MU8 473 aa12.92□□□□□ -0.34
CDK5RAP3-212ENST00000579175 DUSP23Q9BVJ7 150 aa12.92□□□□□ -0.34
CDK5RAP3-212ENST00000579175 THSD1Q9NS62 852 aa12.92□□□□□ -0.34
CDK5RAP3-212ENST00000579175 NLGN3Q9NZ94 848 aa12.92□□□□□ -0.34
CDK5RAP3-212ENST00000579175 BECN2A8MW95 431 aa12.91□□□□□ -0.34
CDK5RAP3-212ENST00000579175 NEBLO76041 1014 aa12.91□□□□□ -0.34
CDK5RAP3-212ENST00000579175 ENDOD1O94919 500 aa12.91□□□□□ -0.34
CDK5RAP3-212ENST00000579175 MT-CO1P00395 513 aa12.91□□□□□ -0.34
CDK5RAP3-212ENST00000579175 IGLV3-25P01717 112 aa12.91□□□□□ -0.34
CDK5RAP3-212ENST00000579175 PRNPP04156 253 aa12.91□□□□□ -0.34
CDK5RAP3-212ENST00000579175 CTSLP07711 333 aa12.91□□□□□ -0.34
CDK5RAP3-212ENST00000579175 RHOCP08134 193 aa12.91□□□□□ -0.34
CDK5RAP3-212ENST00000579175 SRCP12931 536 aa12.91□□□□□ -0.34
CDK5RAP3-212ENST00000579175 RRM1P23921 792 aa12.91□□□□□ -0.34
CDK5RAP3-212ENST00000579175 VASPP50552 380 aaPredicted RBP12.91□□□□□ -0.34
CDK5RAP3-212ENST00000579175 DNA2P51530 1060 aa12.91□□□□□ -0.34
CDK5RAP3-212ENST00000579175 IRAK1P51617 712 aa12.91□□□□□ -0.34
CDK5RAP3-212ENST00000579175 ERVPABLB-1P60509 514 aa12.91□□□□□ -0.34
CDK5RAP3-212ENST00000579175 HNRNPKP61978 463 aaKnown RBP eCLIP12.91□□□□□ -0.34
CDK5RAP3-212ENST00000579175 TPM4P67936 248 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms